Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt1a19
(705 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF099915-3|AAC68766.1| 475|Caenorhabditis elegans Hypothetical ... 155 4e-38
U41557-9|AAA83309.1| 479|Caenorhabditis elegans Hypothetical pr... 154 7e-38
Z66519-14|CAA91377.2| 1146|Caenorhabditis elegans Hypothetical p... 29 3.2
U56101-1|AAC47459.1| 1167|Caenorhabditis elegans AGE-1 protein. 29 3.2
AL110499-5|CAB57914.1| 1146|Caenorhabditis elegans Hypothetical ... 29 3.2
AF016422-4|AAG24172.1| 320|Caenorhabditis elegans Hypothetical ... 29 4.3
U80450-5|AAB37830.1| 587|Caenorhabditis elegans Kinesin-like pr... 28 5.7
AB032080-1|BAA92263.2| 587|Caenorhabditis elegans kinesin like ... 28 5.7
Z82078-7|CAB04947.3| 801|Caenorhabditis elegans Hypothetical pr... 27 9.9
AF497514-1|AAM33381.1| 801|Caenorhabditis elegans heavy metal t... 27 9.9
AF497513-1|AAM33380.1| 801|Caenorhabditis elegans heavy metal t... 27 9.9
AF490977-1|AAQ06435.1| 801|Caenorhabditis elegans ABC6 protein ... 27 9.9
>AF099915-3|AAC68766.1| 475|Caenorhabditis elegans Hypothetical
protein E02H9.5 protein.
Length = 475
Score = 155 bits (375), Expect = 4e-38
Identities = 81/216 (37%), Positives = 128/216 (59%), Gaps = 8/216 (3%)
Frame = +2
Query: 80 FPPGFKFGAASASYQVEGAWNVSDKGESIWDRLVHTKPEAIMDLTNGDVTCDSYHLWERD 259
FP FK A+A+YQ+EGA +++ +G S WD + +P I+D ++ D++CD ++ D
Sbjct: 7 FPKNFKLATATAAYQIEGAKDLNGRGFSTWDA-IRLEPGRILDNSDPDLSCDGLLKYKED 65
Query: 260 IEMATELGLHFYRFSLSWPRLMPTGFSNKISEDGQKYYNNLIDGLLDKGIEPLVTIFHWD 439
+ + E+G+ YRFS+SW R++P G + I+E+G K+Y +L L + IEP+VT+FH+D
Sbjct: 66 VALLAEIGVTNYRFSISWSRILPDGTLSTINEEGIKFYRDLCLLLKENNIEPVVTLFHFD 125
Query: 440 LPQSLQDLG-GWMNPLIVDWFEDYARVVFSLFADRVKTWVSINE-PVSICDYVYNTGG-- 607
+P ++ D G W+N + FE +A + F F D VKTW++ NE + G
Sbjct: 126 MPLAIYDNGTAWLNRENCEHFEKFADLCFQKFGDLVKTWITYNEINCQAWGSIVKVEGEF 185
Query: 608 -MAP--PIFEPH-VAPYVCTKHVLLAHAKAWRIYDE 703
+ P P E H APY ++LL HAK +R YD+
Sbjct: 186 WLCPERPEIENHKQAPYFGAANMLLTHAKIYRNYDQ 221
>U41557-9|AAA83309.1| 479|Caenorhabditis elegans Hypothetical
protein C50F7.10 protein.
Length = 479
Score = 154 bits (373), Expect = 7e-38
Identities = 80/216 (37%), Positives = 128/216 (59%), Gaps = 8/216 (3%)
Frame = +2
Query: 80 FPPGFKFGAASASYQVEGAWNVSDKGESIWDRLVHTKPEAIMDLTNGDVTCDSYHLWERD 259
FP F+ A+A+YQ+EGA N+ +G S WD + ++ I D ++ D++C+ ++ D
Sbjct: 7 FPKNFQLATATAAYQIEGAKNLDGRGFSTWDS-IRSENGRIHDNSDPDLSCEGRLKYKED 65
Query: 260 IEMATELGLHFYRFSLSWPRLMPTGFSNKISEDGQKYYNNLIDGLLDKGIEPLVTIFHWD 439
+ + +++G+ YRFS+SW R++P G I+EDG ++Y ++ L D GIEP+VT+FH+D
Sbjct: 66 VALLSKIGVTSYRFSISWSRILPDGTLKTINEDGIQFYRDICLLLRDNGIEPIVTLFHFD 125
Query: 440 LPQSLQDLG-GWMNPLIVDWFEDYARVVFSLFADRVKTWVSINE-PVSICDYVYNTGG-- 607
+P S+ D G W+N + FE +A + F F D VKTW++ NE + V G
Sbjct: 126 MPLSIYDNGTSWLNKENCEHFEKFADLCFQKFGDLVKTWITFNEINMQAWSSVVKIEGEL 185
Query: 608 -MAP--PIFEPH-VAPYVCTKHVLLAHAKAWRIYDE 703
+ P P E H APY+ ++LL HAK +R Y +
Sbjct: 186 WLCPDRPEIENHEQAPYIAATNMLLTHAKIYRNYQK 221
>Z66519-14|CAA91377.2| 1146|Caenorhabditis elegans Hypothetical
protein B0334.8 protein.
Length = 1146
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -3
Query: 628 LENRRSHSASVINIVANRYRLVYRDPGFNSIRE-QREHDPSVVLKPVDYQR 479
L RS +NI+ + Y RDPG+ ++ ++H+ +VL+ D QR
Sbjct: 549 LVKHRSTWTETLNIMGDDYESCIRDPGYKKLQMLVKKHESGIVLEE-DEQR 598
>U56101-1|AAC47459.1| 1167|Caenorhabditis elegans AGE-1 protein.
Length = 1167
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -3
Query: 628 LENRRSHSASVINIVANRYRLVYRDPGFNSIRE-QREHDPSVVLKPVDYQR 479
L RS +NI+ + Y RDPG+ ++ ++H+ +VL+ D QR
Sbjct: 570 LVKHRSTWTETLNIMGDDYESCIRDPGYKKLQMLVKKHESGIVLEE-DEQR 619
>AL110499-5|CAB57914.1| 1146|Caenorhabditis elegans Hypothetical
protein B0334.8 protein.
Length = 1146
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -3
Query: 628 LENRRSHSASVINIVANRYRLVYRDPGFNSIRE-QREHDPSVVLKPVDYQR 479
L RS +NI+ + Y RDPG+ ++ ++H+ +VL+ D QR
Sbjct: 549 LVKHRSTWTETLNIMGDDYESCIRDPGYKKLQMLVKKHESGIVLEE-DEQR 598
>AF016422-4|AAG24172.1| 320|Caenorhabditis elegans Hypothetical
protein R09E12.3 protein.
Length = 320
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/73 (24%), Positives = 30/73 (41%)
Frame = -3
Query: 646 IRGHVRLENRRSHSASVINIVANRYRLVYRDPGFNSIREQREHDPSVVLKPVDYQRIHPA 467
+R +R + A ++ + + RDPG I EQ +DP V + + I
Sbjct: 248 VRNCLRSNDEDPEKAKERSLADPEVQEILRDPGMRMILEQMSNDPGAVREHLKNPEIFQK 307
Query: 466 TKILQTLG*IPMK 428
L+ G I M+
Sbjct: 308 LMKLRDAGVIQMR 320
>U80450-5|AAB37830.1| 587|Caenorhabditis elegans Kinesin-like
protein protein 15 protein.
Length = 587
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +2
Query: 398 DKGIEPLVTIFHWDLPQSLQDLGGWMNPLIVDWFEDYARVVFSLFADRVKTWVSINE 568
++GI P F + + L+ LG W + + E Y V + L +DR + +N+
Sbjct: 345 EEGIIPRAAAFLFAESRKLESLG-WKFDFSLSFLEVYNNVAYDLLSDRAVVQLRLND 400
>AB032080-1|BAA92263.2| 587|Caenorhabditis elegans kinesin like
protein-15 protein.
Length = 587
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +2
Query: 398 DKGIEPLVTIFHWDLPQSLQDLGGWMNPLIVDWFEDYARVVFSLFADRVKTWVSINE 568
++GI P F + + L+ LG W + + E Y V + L +DR + +N+
Sbjct: 345 EEGIIPRAAAFLFAESRKLESLG-WKFDFSLSFLEVYNNVAYDLLSDRAVVQLRLND 400
>Z82078-7|CAB04947.3| 801|Caenorhabditis elegans Hypothetical
protein W09D6.6 protein.
Length = 801
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +2
Query: 263 EMATELGLHFYRFSLSWPRLMPTGFSNKISEDGQKYYNNLIDGLL 397
E+ EL H + SL W TG ++ + G NN+++ +L
Sbjct: 303 ELEVELFKHLHSLSLRWHLSRKTGQVLRVMDRGTSSVNNILNYIL 347
>AF497514-1|AAM33381.1| 801|Caenorhabditis elegans heavy metal
tolerance factor 1 protein.
Length = 801
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +2
Query: 263 EMATELGLHFYRFSLSWPRLMPTGFSNKISEDGQKYYNNLIDGLL 397
E+ EL H + SL W TG ++ + G NN+++ +L
Sbjct: 303 ELEVELFKHLHSLSLRWHLSRKTGQVLRVMDRGTSSVNNILNYIL 347
>AF497513-1|AAM33380.1| 801|Caenorhabditis elegans heavy metal
tolerance factor 1 protein.
Length = 801
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +2
Query: 263 EMATELGLHFYRFSLSWPRLMPTGFSNKISEDGQKYYNNLIDGLL 397
E+ EL H + SL W TG ++ + G NN+++ +L
Sbjct: 303 ELEVELFKHLHSLSLRWHLSRKTGQVLRVMDRGTSSVNNILNYIL 347
>AF490977-1|AAQ06435.1| 801|Caenorhabditis elegans ABC6 protein
protein.
Length = 801
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +2
Query: 263 EMATELGLHFYRFSLSWPRLMPTGFSNKISEDGQKYYNNLIDGLL 397
E+ EL H + SL W TG ++ + G NN+++ +L
Sbjct: 303 ELEVELFKHLHSLSLRWHLSRKTGQVLRVMDRGTSSVNNILNYIL 347
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,928,119
Number of Sequences: 27780
Number of extensions: 365746
Number of successful extensions: 909
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 903
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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