Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt1a11
(769 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U43701-1|AAB03210.1| 156|Homo sapiens ribosomal protein L23a pr... 42 0.002
U37230-1|AAB17510.1| 156|Homo sapiens ribosomal protein L23a pr... 42 0.002
U02032-1|AAA03341.1| 156|Homo sapiens ribosomal protein L23a pr... 42 0.002
L13799-1|AAA35681.1| 147|Homo sapiens protein ( Homo sapiens (c... 42 0.002
BC058041-1|AAH58041.1| 156|Homo sapiens ribosomal protein L23a ... 42 0.002
BC014459-1|AAH14459.1| 156|Homo sapiens ribosomal protein L23a ... 42 0.002
AF001689-1|AAC51934.1| 156|Homo sapiens ribosomal protein L23A ... 42 0.002
BC098172-1|AAH98172.1| 130|Homo sapiens RPL23AP13 protein protein. 42 0.003
BC096740-1|AAH96740.1| 130|Homo sapiens RPL23AP13 protein protein. 42 0.003
BC096706-1|AAH96706.1| 130|Homo sapiens RPL23AP13 protein protein. 42 0.003
AC092839-2|AAX93105.1| 130|Homo sapiens unknown protein. 42 0.003
AE006463-8|AAK61228.1| 156|Homo sapiens 60S ribosomal protein L... 36 0.16
>U43701-1|AAB03210.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 41.9 bits (94), Expect = 0.002
Identities = 19/32 (59%), Positives = 24/32 (75%)
Frame = +1
Query: 658 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKT 753
KALKA++ V+KG H + +KIR S FRRPKT
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKT 51
>U37230-1|AAB17510.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 41.9 bits (94), Expect = 0.002
Identities = 19/32 (59%), Positives = 24/32 (75%)
Frame = +1
Query: 658 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKT 753
KALKA++ V+KG H + +KIR S FRRPKT
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKT 51
>U02032-1|AAA03341.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 41.9 bits (94), Expect = 0.002
Identities = 19/32 (59%), Positives = 24/32 (75%)
Frame = +1
Query: 658 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKT 753
KALKA++ V+KG H + +KIR S FRRPKT
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKT 51
>L13799-1|AAA35681.1| 147|Homo sapiens protein ( Homo sapiens
(clone 01) liver expressed protein mRNA, 3'end. ).
Length = 147
Score = 41.9 bits (94), Expect = 0.002
Identities = 19/32 (59%), Positives = 24/32 (75%)
Frame = +1
Query: 658 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKT 753
KALKA++ V+KG H + +KIR S FRRPKT
Sbjct: 11 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKT 42
>BC058041-1|AAH58041.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 41.9 bits (94), Expect = 0.002
Identities = 19/32 (59%), Positives = 24/32 (75%)
Frame = +1
Query: 658 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKT 753
KALKA++ V+KG H + +KIR S FRRPKT
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKT 51
>BC014459-1|AAH14459.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 41.9 bits (94), Expect = 0.002
Identities = 19/32 (59%), Positives = 24/32 (75%)
Frame = +1
Query: 658 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKT 753
KALKA++ V+KG H + +KIR S FRRPKT
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKT 51
>AF001689-1|AAC51934.1| 156|Homo sapiens ribosomal protein L23A
protein.
Length = 156
Score = 41.9 bits (94), Expect = 0.002
Identities = 19/32 (59%), Positives = 24/32 (75%)
Frame = +1
Query: 658 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKT 753
KALKA++ V+KG H + +KIR S FRRPKT
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKT 51
>BC098172-1|AAH98172.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 41.5 bits (93), Expect = 0.003
Identities = 19/32 (59%), Positives = 25/32 (78%)
Frame = +1
Query: 658 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKT 753
KALKA++ V+KG HG + +KIR S F+RPKT
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKT 51
>BC096740-1|AAH96740.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 41.5 bits (93), Expect = 0.003
Identities = 19/32 (59%), Positives = 25/32 (78%)
Frame = +1
Query: 658 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKT 753
KALKA++ V+KG HG + +KIR S F+RPKT
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKT 51
>BC096706-1|AAH96706.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 41.5 bits (93), Expect = 0.003
Identities = 19/32 (59%), Positives = 25/32 (78%)
Frame = +1
Query: 658 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKT 753
KALKA++ V+KG HG + +KIR S F+RPKT
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKT 51
>AC092839-2|AAX93105.1| 130|Homo sapiens unknown protein.
Length = 130
Score = 41.5 bits (93), Expect = 0.003
Identities = 19/32 (59%), Positives = 25/32 (78%)
Frame = +1
Query: 658 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKT 753
KALKA++ V+KG HG + +KIR S F+RPKT
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKT 51
>AE006463-8|AAK61228.1| 156|Homo sapiens 60S ribosomal protein L23A
like protein.
Length = 156
Score = 35.9 bits (79), Expect = 0.16
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +1
Query: 658 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKT 753
KALKA++ +KG H +K R S+ F+RPKT
Sbjct: 20 KALKAKKAALKGVHSHIKKKTRTSLTFQRPKT 51
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.314 0.130 0.371
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,975,098
Number of Sequences: 237096
Number of extensions: 769430
Number of successful extensions: 1441
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1378
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1441
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9255747988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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