Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt1a01
(738 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 44 3e-05
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 42 7e-05
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 41 2e-04
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 40 3e-04
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 40 4e-04
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 40 5e-04
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 37 0.003
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 36 0.008
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 35 0.014
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 35 0.014
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 29 0.52
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 29 0.69
SPBC19F5.05c |ppp1|SPBC25D12.01c|pescadillo-family BRCT domain p... 29 0.69
SPAC139.05 |||succinate-semialdehyde dehydrogenase |Schizosaccha... 27 2.1
SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3 |Schizosacc... 27 2.1
SPAC13A11.04c |ubp8||ubiquitin C-terminal hydrolase Ubp8|Schizos... 27 2.8
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 26 4.9
SPBC660.14 |mik1||mitotic inhibitor kinase Mik1|Schizosaccharomy... 26 4.9
SPAC222.06 |mak16||nuclear HMG-like acidic protein Mak16|Schizos... 26 4.9
SPAC32A11.01 |mug8||conserved fungal protein|Schizosaccharomyces... 26 6.4
SPBC13G1.03c |pex14||peroxisomal membrane anchor protein|Schizos... 25 8.5
SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr 2|||... 25 8.5
SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|ch... 25 8.5
SPBC216.02 |mcp5|num1, mug21|cortical anchoring factor for dynei... 25 8.5
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 43.6 bits (98), Expect = 3e-05
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +3
Query: 579 KGYSSITKLTRHVRTHAGQRSYPCKFCNKSFVKSHHYTRHLRAKH 713
K ++ L RH RTH +++ C FCN++F +S RH++ H
Sbjct: 35 KSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQQMH 79
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 42.3 bits (95), Expect = 7e-05
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +3
Query: 579 KGYSSITKLTRHVRTHAGQRSYPCKF--CNKSFVKSHHYTRHLRAKHASQSASR 734
K + + TRH+RTH G++ + C F C K F +S TRH R H + ++ R
Sbjct: 33 KAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARI-HTNANSRR 85
Score = 33.9 bits (74), Expect = 0.024
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 600 KLTRHVRTHAGQRSYPCKFCNKSFVKSHHYTRHLR 704
K +R + R Y C C K+F + H TRH+R
Sbjct: 12 KPSRSTKNPDAPRPYKCPLCTKAFYRLEHQTRHIR 46
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 41.1 bits (92), Expect = 2e-04
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +3
Query: 480 NIKIGDGPDDESNS-ARIKVITTDNSKEKTKSSNKGYSSITKLTRHVRTHAGQRSYPCKF 656
N +G+ ++ S+S A+ + + N NK ++ L H+ TH R + C
Sbjct: 545 NSLVGNKSENSSSSKAKSESKSQGNYVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSI 604
Query: 657 CNKSFVKSHHYTRH 698
C KSF + H RH
Sbjct: 605 CKKSFARQHDKRRH 618
Score = 30.7 bits (66), Expect = 0.23
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +3
Query: 609 RHVRTHAGQRSYPCKFCNKSFVKSHHYTRHLRAK 710
RH + H G +++ C CN+ F + RH +++
Sbjct: 617 RHEQLHTGIKAFACVTCNQRFARMDALNRHYKSE 650
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 40.3 bits (90), Expect = 3e-04
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +3
Query: 579 KGYSSITKLTRHVRTHAGQRSYPCKFCNKSFVKSHHYTRHLRAKHASQS 725
K ++ RH R+H +++ C C+ SF +S RH+ KH Q+
Sbjct: 26 KSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHVNQKHVKQN 74
Score = 29.9 bits (64), Expect = 0.40
Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Frame = +3
Query: 594 ITKLTRHVRTHAGQRSYPCKF--CNKSFVKSHHYTRHLRAKHASQSA 728
+TK + G Y C F C KSF + H RH R+ H + A
Sbjct: 1 MTKAKKSRAYQEGDIRYKCDFQGCTKSFTRKEHARRHFRS-HTNSKA 46
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 39.9 bits (89), Expect = 4e-04
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 576 NKGYSSITKLTRHVRTHAGQRSYPCKFCNKSFVKSHHYTRHLR 704
NK + + H++TH R Y C C FV+ H RHLR
Sbjct: 451 NKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLR 493
Score = 26.6 bits (56), Expect = 3.7
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +3
Query: 603 LTRHVRTHAGQRSYPCKFCNKSFVKSHHYTRH 698
L RH+R H R Y C+ C K F + RH
Sbjct: 488 LKRHLRIHENGRPYVCE-CLKRFNRLDALNRH 518
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 39.5 bits (88), Expect = 5e-04
Identities = 22/77 (28%), Positives = 35/77 (45%)
Frame = +3
Query: 492 GDGPDDESNSARIKVITTDNSKEKTKSSNKGYSSITKLTRHVRTHAGQRSYPCKFCNKSF 671
G P+ + +I I TD S ++ K + V G +S+ C C+K F
Sbjct: 378 GRSPNSMEATEQIGTIGTDGSMKRRKRRQPSNRKTS-----VPRSPGGKSFVCPECSKKF 432
Query: 672 VKSHHYTRHLRAKHASQ 722
+S H RH+R+ H S+
Sbjct: 433 KRSEHLRRHIRSLHTSE 449
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 37.1 bits (82), Expect = 0.003
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +3
Query: 579 KGYSSITKLTRHVRTHAGQRSYPCKF--CNKSFVKSHHYTRHLR 704
K YS + L +H+RTH+ +R + C + C+K+F + H H R
Sbjct: 32 KKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKR 75
Score = 32.7 bits (71), Expect = 0.056
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Frame = +3
Query: 528 IKVITTDNSKEKTKSSNKGYSSITKLTRHVRTHAGQ--RSYPCKF--CNKSFVKSHHYTR 695
I+ + + KEK SSN K+ V H + R Y C F CN F + + R
Sbjct: 309 IEGVAIHDQKEKELSSNLVSDVAKKIINEVTGHGYKEAREYSCSFPECNYRFKRLYDMHR 368
Query: 696 HLRAKH 713
HL + H
Sbjct: 369 HLNSHH 374
Score = 28.3 bits (60), Expect = 1.2
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = +3
Query: 579 KGYSSITKLTRHVRT-HAGQRSYPCKFCNKSFVKSHHYTRHL 701
K ++ + L +H+ H G ++ C C F H RHL
Sbjct: 245 KSFTRSSALKKHISVIHEGNMAFHCDSCGTKFGYKHMLQRHL 286
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 35.5 bits (78), Expect = 0.008
Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = +3
Query: 603 LTRHVRTHAGQRSYPCKF--CNKSFVKSHHYTRHLRAKHASQS 725
L H+R+H G++ + C C++SF +S +H+R H + +
Sbjct: 93 LVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMRTVHEADT 135
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 34.7 bits (76), Expect = 0.014
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = +3
Query: 609 RHVRTHAGQRSYPCKF--CNKSFVKSHHYTRHLR 704
RH+R+H G++ + C + C K F + RH+R
Sbjct: 21 RHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVR 54
Score = 31.5 bits (68), Expect = 0.13
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 636 RSYPCKFCNKSFVKSHHYTRHLRA 707
+SY C FC + F + H RH+R+
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRS 25
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 34.7 bits (76), Expect = 0.014
Identities = 33/128 (25%), Positives = 53/128 (41%), Gaps = 10/128 (7%)
Frame = +3
Query: 351 LKSKGKVPAEVPVMKTVIEGGATVQVSTQDLSDTDMEDDENVYNIKIGDGPDDESNSARI 530
L K + AE+ V+ T+ A Q SD++ D N N K S S +I
Sbjct: 394 LNFKDNMSAELSVVATLASNSAQAHPMGQQ-SDSNYSDHHN--NDKRAHVSRRHSTSRKI 450
Query: 531 KVITTDNSKEKTKSSNK--------GYSSITKLTRHVRTHAGQRSYPCKF--CNKSFVKS 680
T +S + ++ + G+S + L H +H G+R + C + C K+F
Sbjct: 451 AQSHTGSSSTSSAANVRYRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVR 510
Query: 681 HHYTRHLR 704
+ RH R
Sbjct: 511 SNMRRHQR 518
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 29.5 bits (63), Expect = 0.52
Identities = 13/49 (26%), Positives = 21/49 (42%)
Frame = +3
Query: 579 KGYSSITKLTRHVRTHAGQRSYPCKFCNKSFVKSHHYTRHLRAKHASQS 725
K ++ LTRH H+ PC +C + RH++ H +S
Sbjct: 38 KRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFHNDKS 86
Score = 26.6 bits (56), Expect = 3.7
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 633 QRSYPCKFCNKSFVKSHHYTRHLRAKHA 716
+R +PC C K F + + TRH +A H+
Sbjct: 28 KRVFPCDQCAKRFTRHENLTRH-KACHS 54
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 29.1 bits (62), Expect = 0.69
Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +3
Query: 549 NSKEKTKSSNKGYSSITKLTRHVRTHAGQ-RSYPCKFCNKSFVKSHHYTRHLRA 707
N+ S++K +S T + + + Y C+ C ++F + H RH+R+
Sbjct: 38 NTPSSVTSNSKPVASSTAAKKDPNAPPQKVKQYVCETCTRAFARLEHLKRHIRS 91
Score = 26.2 bits (55), Expect = 4.9
Identities = 12/63 (19%), Positives = 27/63 (42%), Gaps = 7/63 (11%)
Frame = +3
Query: 567 KSSNKGYSSITKLTRHVRTHAGQRSYPCK-------FCNKSFVKSHHYTRHLRAKHASQS 725
++ + ++ + L RH+R+H ++ + C C + F + RH + H +
Sbjct: 73 ETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQKIHRNPQ 132
Query: 726 ASR 734
R
Sbjct: 133 PRR 135
>SPBC19F5.05c |ppp1|SPBC25D12.01c|pescadillo-family BRCT domain
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 607
Score = 29.1 bits (62), Expect = 0.69
Identities = 13/42 (30%), Positives = 26/42 (61%)
Frame = +3
Query: 429 STQDLSDTDMEDDENVYNIKIGDGPDDESNSARIKVITTDNS 554
+T+D +D + E +EN+ K DG D+E + + + I++ N+
Sbjct: 310 TTED-ADEEPETEENLDEFKPADGADNEDSKSLVSHISSSNT 350
>SPAC139.05 |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 493
Score = 27.5 bits (58), Expect = 2.1
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +3
Query: 468 ENVYNIKIGDGPDDESNSARIKVITTDNSKEKTKSSNKGYSSITKLT 608
E V IK+GDG D S+SA +I+ D K+ +K S K+T
Sbjct: 320 EKVKTIKVGDGFD--SSSAVGPLISQDGCKKVSKHIEDAVSKGAKIT 364
>SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 732
Score = 27.5 bits (58), Expect = 2.1
Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = +3
Query: 630 GQRSYP-CKFCNKSFVKSHHYTRHLRAKH 713
G + +P C+FCN F +H R KH
Sbjct: 240 GFKGHPKCEFCNTHFYDDDELFKHCREKH 268
>SPAC13A11.04c |ubp8||ubiquitin C-terminal hydrolase
Ubp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 449
Score = 27.1 bits (57), Expect = 2.8
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Frame = +3
Query: 15 MDSRKESLSTLKICRFCLSQDETLLTNLYEKNRAPKNAITLQLKILSCV---AIEVFPSD 185
+D +KE ++ + L +E L E+ + + +Q SC AI+ D
Sbjct: 276 LDCKKERVAVDPLMDISLDINEPTLQGCLERFVSKEK---VQYSCHSCGSKNAIKQLVFD 332
Query: 186 KMPPYICTRCKFFMDLNF 239
K+PP IC + K F NF
Sbjct: 333 KLPPTICMQLKRFEQNNF 350
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 26.2 bits (55), Expect = 4.9
Identities = 13/57 (22%), Positives = 27/57 (47%)
Frame = +3
Query: 411 GATVQVSTQDLSDTDMEDDENVYNIKIGDGPDDESNSARIKVITTDNSKEKTKSSNK 581
G T + ++D E++ + ++ D P+D SNS K+ N ++ ++ K
Sbjct: 3962 GVTKDSVVSENENSDSEEENQDLDEEVNDIPEDLSNSLNEKLWDEPNEEDLLETEQK 4018
>SPBC660.14 |mik1||mitotic inhibitor kinase Mik1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 581
Score = 26.2 bits (55), Expect = 4.9
Identities = 16/72 (22%), Positives = 30/72 (41%)
Frame = +3
Query: 465 DENVYNIKIGDGPDDESNSARIKVITTDNSKEKTKSSNKGYSSITKLTRHVRTHAGQRSY 644
DE +YN G + S+++ N+K + + + +L+ VR H ++
Sbjct: 34 DEPIYNFSSGHEENQSHKSSKLTFFKPSNTKRSPHTPMQNNAKAIRLSTTVR-HGIFKNS 92
Query: 645 PCKFCNKSFVKS 680
C+K F S
Sbjct: 93 DLDGCSKPFAFS 104
>SPAC222.06 |mak16||nuclear HMG-like acidic protein
Mak16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 26.2 bits (55), Expect = 4.9
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +3
Query: 429 STQDLSDTDMEDDENVYNIKIGDGPDDESNSARIKVITTDNSKEKTK 569
S Q + ++ E++E+ + D +DE N +I+ TD++K+ K
Sbjct: 232 SDQSMETSESEEEES--SESESDEDEDEDNKGKIRKRKTDDAKKSRK 276
>SPAC32A11.01 |mug8||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 720
Score = 25.8 bits (54), Expect = 6.4
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +3
Query: 306 LESLNWPPSLKKIFQLKS 359
L+S N+PPSLKK+ K+
Sbjct: 245 LQSFNYPPSLKKLNDAKA 262
>SPBC13G1.03c |pex14||peroxisomal membrane anchor
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 286
Score = 25.4 bits (53), Expect = 8.5
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +3
Query: 273 NILQFIQNGTTLESLNWPPSLKKIFQLKSKGKVPAEV 383
N ++F++ T L++ P +KKI LKSKG E+
Sbjct: 8 NSVEFLREKTVLDA----PDVKKIEFLKSKGLTAEEI 40
>SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr
2|||Manual
Length = 404
Score = 25.4 bits (53), Expect = 8.5
Identities = 8/30 (26%), Positives = 19/30 (63%)
Frame = +3
Query: 387 VMKTVIEGGATVQVSTQDLSDTDMEDDENV 476
+ + ++ GGA ++ DL + D ++DE++
Sbjct: 59 IHQLMVSGGANSSINVWDLQNIDQKEDEDL 88
>SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1822
Score = 25.4 bits (53), Expect = 8.5
Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 432 TQDLSDTDMEDDENVYNI-KIGDGPDDESNSARIKVITTDNSKEKTKSSNK 581
T+ ++D+D EDDEN ++ ++ + I + T D+S K N+
Sbjct: 38 TKIINDSDNEDDENGMDLGRVASESLEGDAVVSIDINTEDSSLSPAKQENE 88
>SPBC216.02 |mcp5|num1, mug21|cortical anchoring factor for dynein
Mcp5/Num1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 968
Score = 25.4 bits (53), Expect = 8.5
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +3
Query: 570 SSNKGYSSITKLTRHVRTHAGQRSYPCKFCNKSFVKSH 683
SS +S+ KL +HV YP K F KSH
Sbjct: 833 SSTCNANSVNKLMKHVMMGNEMMKYPRSESFKMFKKSH 870
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,679,150
Number of Sequences: 5004
Number of extensions: 51611
Number of successful extensions: 208
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 206
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 349251756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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