Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt1a01
(738 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 46 5e-07
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 39 6e-05
L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein pro... 36 5e-04
AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc fi... 30 0.026
L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein pro... 29 0.060
AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc fi... 24 1.7
AY217747-1|AAP45005.1| 246|Apis mellifera short-chain dehydroge... 22 5.2
AY375535-1|AAQ82648.1| 147|Apis mellifera doublesex protein. 22 6.9
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 45.6 bits (103), Expect = 5e-07
Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 4/111 (3%)
Frame = +3
Query: 384 PVMKTVIEGGATVQVSTQDLSDTDMED-DENVYNIKIGDGPDDESNSARIKVITTDNSKE 560
PV V +V S S+T + + +E Y + D+ N + + + E
Sbjct: 30 PVKSLVCSPDLSVFTSPACGSETPLTNIEEKTYQCLLCQKAFDQKNLYQSHLRSHGKEGE 89
Query: 561 KTKSSN---KGYSSITKLTRHVRTHAGQRSYPCKFCNKSFVKSHHYTRHLR 704
N K ++ +LTRH RTH G++ Y C++C+KSF + + H R
Sbjct: 90 DPYRCNICGKTFAVPARLTRHYRTHTGEKPYQCEYCSKSFSVKENLSVHRR 140
Score = 42.7 bits (96), Expect = 3e-06
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +3
Query: 567 KSSNKGYSSITKLTRHVRTHAGQRSYPCKFCNKSFVKSHHYTRHLRAKHASQ 722
K+ KG++ +L H RTH G++ Y C C KSF +H H A + +
Sbjct: 207 KACGKGFTCSKQLKVHTRTHTGEKPYTCDICGKSFGYNHVLKLHQVAHYGEK 258
Score = 41.9 bits (94), Expect = 6e-06
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +3
Query: 537 ITTDNSKEKTKSSNKGYSSITKLTRHVRTHAGQRSYPCKFCNKSFVKSHHYTRHLR 704
I T K + + KL RH+R H G+R + C C+K+F++S H+R
Sbjct: 141 IHTKERPYKCDVCERAFEHSGKLHRHMRIHTGERPHKCTVCSKTFIQSGQLVIHMR 196
Score = 39.1 bits (87), Expect = 4e-05
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = +3
Query: 537 ITTDNSKEKTKSSNKGYSSITKLTRHVRTHAGQRSYPCKFCNKSFVKSHHYTRHLR 704
I T K +K + +L H+RTH G++ Y CK C K F S H R
Sbjct: 169 IHTGERPHKCTVCSKTFIQSGQLVIHMRTHTGEKPYVCKACGKGFTCSKQLKVHTR 224
Score = 34.7 bits (76), Expect = 0.001
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +3
Query: 576 NKGYSSITKLTRHVRTHAGQRSYPCKFCNKSFVKSHHYTRHLR 704
+K +S L+ H R H +R Y C C ++F S RH+R
Sbjct: 126 SKSFSVKENLSVHRRIHTKERPYKCDVCERAFEHSGKLHRHMR 168
Score = 30.7 bits (66), Expect = 0.015
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Frame = +3
Query: 519 SARIKVITTDNSKEKTKS-----SNKGYSSITKLTRHVRTHAGQRSYPCKFCNKSFVKSH 683
S ++KV T ++ EK + + GY+ + KL H H G++ Y C C+++F
Sbjct: 216 SKQLKVHTRTHTGEKPYTCDICGKSFGYNHVLKL--HQVAHYGEKVYKCTLCHETFGSKK 273
Query: 684 HYTRHLRAKHASQS 725
H++ H+ S
Sbjct: 274 TMELHIKT-HSDSS 286
Score = 28.7 bits (61), Expect = 0.060
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +3
Query: 621 THAGQRSYPCKFCNKSFVKSHHYTRHLRA 707
T+ +++Y C C K+F + + Y HLR+
Sbjct: 55 TNIEEKTYQCLLCQKAFDQKNLYQSHLRS 83
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 38.7 bits (86), Expect = 6e-05
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +3
Query: 576 NKGYSSITKLTRHVRTHAGQRSYPCKFCNKSFVKSHHYTRHLR 704
+K ++ L H+R H G++ Y C C++ FV+ + RHLR
Sbjct: 16 HKRFTRDHHLKTHMRLHTGEKPYHCSHCDRQFVQVANLRRHLR 58
Score = 37.9 bits (84), Expect = 1e-04
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 618 RTHAGQRSYPCKFCNKSFVKSHHYTRHLR 704
RTH G++ + C C+K F + HH H+R
Sbjct: 2 RTHTGEKPFECPECHKRFTRDHHLKTHMR 30
Score = 33.1 bits (72), Expect = 0.003
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +3
Query: 576 NKGYSSITKLTRHVRTHAGQRSYPCKFC 659
++ + + L RH+R H G+R Y C+ C
Sbjct: 44 DRQFVQVANLRRHLRVHTGERPYACELC 71
>L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein
protein.
Length = 81
Score = 35.5 bits (78), Expect = 5e-04
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +3
Query: 579 KGYSSITKLTRHVRTHAGQRSYPCKFCNKSF 671
K +S L H+RTH G++ + C+ CN++F
Sbjct: 50 KAFSRPWLLQGHIRTHTGEKPFSCQHCNRAF 80
Score = 28.3 bits (60), Expect = 0.080
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +3
Query: 567 KSSNKGYSSITKLTRHVRTHAGQRSYPCK--FCNKSFVKSHHYTRHLR 704
K K Y S+ L H+RTH + PCK C K+F + H+R
Sbjct: 20 KYCEKVYVSLGALKMHIRTH----TLPCKCHLCGKAFSRPWLLQGHIR 63
Score = 24.6 bits (51), Expect = 0.98
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +3
Query: 633 QRSYPCKFCNKSFVKSHHYTRHLR 704
++S+ CK+C K +V H+R
Sbjct: 14 KKSFSCKYCEKVYVSLGALKMHIR 37
>AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc
finger domain-Z3 isoform protein.
Length = 92
Score = 29.9 bits (64), Expect = 0.026
Identities = 15/61 (24%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Frame = +3
Query: 549 NSKEKTKSSNKGYSSITKLTRHVRTHAGQRS--YPCKFCNKSFVKSHHYTRHLRAKHASQ 722
N ++ + +S L RH + Q Y C+FCN+ + + T H +H
Sbjct: 3 NEPQECPYCRRNFSCYYSLKRHFQDKHEQSDTLYVCEFCNRRYRTKNSLTTHKSLQHRGS 62
Query: 723 S 725
S
Sbjct: 63 S 63
>L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein
protein.
Length = 69
Score = 28.7 bits (61), Expect = 0.060
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +3
Query: 603 LTRHVRTHAGQRSYPCKFCNKSFVKSHHYTRHLRA 707
L H+R H G + + C+ C+ S V HL++
Sbjct: 4 LEYHLRNHFGSKPFKCEKCSYSCVNKSMLNSHLKS 38
Score = 27.1 bits (57), Expect = 0.18
Identities = 14/48 (29%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Frame = +3
Query: 567 KSSNKGYSSITK--LTRHVRTHAGQRSYPCKFCNKSFVKSHHYTRHLR 704
K YS + K L H+++H+ Y C C + H HLR
Sbjct: 18 KCEKCSYSCVNKSMLNSHLKSHSNVYQYRCANCTYATKYCHSLKLHLR 65
>AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc
finger domain-Z2 isoform protein.
Length = 71
Score = 23.8 bits (49), Expect = 1.7
Identities = 8/32 (25%), Positives = 15/32 (46%)
Frame = +3
Query: 627 AGQRSYPCKFCNKSFVKSHHYTRHLRAKHASQ 722
+ ++ + C+ C K RH+ KHA +
Sbjct: 1 SAKKLFTCQLCGKVLCSKASLKRHVADKHAER 32
>AY217747-1|AAP45005.1| 246|Apis mellifera short-chain
dehydrogenase/reductase protein.
Length = 246
Score = 22.2 bits (45), Expect = 5.2
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +3
Query: 438 DLSDTDMEDDENVYNIKIGDGPDDESNSARIKVITTDN 551
DL +TDM N ++ P D SN + T DN
Sbjct: 194 DLVETDMTAQWLKENSRLALKPKDVSNCVLFALQTPDN 231
>AY375535-1|AAQ82648.1| 147|Apis mellifera doublesex protein.
Length = 147
Score = 21.8 bits (44), Expect = 6.9
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +2
Query: 197 IHMHSLQVFHGPQL*VQENLSV 262
+H H+ V H PQ EN+ +
Sbjct: 104 LHPHTAMVTHLPQTLTSENVEI 125
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,931
Number of Sequences: 438
Number of extensions: 3355
Number of successful extensions: 25
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23023035
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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