Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt19p04
(748 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomy... 47 3e-06
SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter Itr1|Schizo... 46 8e-06
SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter Ght7|Schizosa... 33 0.043
SPBC2F12.14c |gua1||IMP dehydrogenase Gua1 |Schizosaccharomyces ... 32 0.100
SPCC4B3.01 ||SPCP25A2.01c|thiosulfate sulfurtransferase|Schizosa... 30 0.40
SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|... 30 0.40
SPBC16A3.13 |meu7|aah4|alpha-amylase homolog Aah4|Schizosaccharo... 29 0.53
SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1 |Schizos... 27 2.1
SPAC29A4.19c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||... 27 2.1
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 26 5.0
SPBC839.08c |its8||pig-N |Schizosaccharomyces pombe|chr 2|||Manual 26 5.0
SPCC16A11.01 ||SPCC63.15|conserved fungal protein|Schizosaccharo... 26 6.6
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 26 6.6
SPCC74.04 |||amino acid permease, unknown 15|Schizosaccharomyces... 25 8.7
SPBC1709.15c |cft2||cleavage factor two Cft2/polyadenylation fac... 25 8.7
>SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 557
Score = 46.8 bits (106), Expect = 3e-06
Identities = 30/131 (22%), Positives = 66/131 (50%)
Frame = +2
Query: 353 AESTKRKVQYLAGICASLTFMFTGATLAWPSPAIPKLSSGEAGVKITDEQISWVVSLHGL 532
AE + L+ + A ++ + G S A+ L S + G ++ Q + S
Sbjct: 74 AEKISSWIWVLSAV-AGISGLLFGYDTGVISGALAVLGS-DLGHVLSSGQKELITSATSF 131
Query: 533 GALLGSYGGQLLNERVGRRKTIFVSSAPGILGAIMIFFSKMPVVMYLARFLMGASTGVIA 712
AL+ + L + VGR++ + + A ++G++++ S+ +M + RF++G G+ +
Sbjct: 132 AALISATTSGWLADWVGRKRLLLCADAIFVIGSVIMAASRNVAMMVVGRFIVGYGIGLTS 191
Query: 713 VVTMIYVTEIA 745
++ +Y+TE+A
Sbjct: 192 LIVPMYITELA 202
>SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter
Itr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 575
Score = 45.6 bits (103), Expect = 8e-06
Identities = 28/101 (27%), Positives = 54/101 (53%)
Frame = +2
Query: 443 SPAIPKLSSGEAGVKITDEQISWVVSLHGLGALLGSYGGQLLNERVGRRKTIFVSSAPGI 622
S A+ + + G ++T+ ++ S LGALLG L + GR+ I ++S I
Sbjct: 109 SGALVVIGTSLGGHELTNGGKEFITSATSLGALLGGIIAGALADFFGRKPVIAIASIIII 168
Query: 623 LGAIMIFFSKMPVVMYLARFLMGASTGVIAVVTMIYVTEIA 745
+G+I+ + M + RF++G G+ +++ +Y++EIA
Sbjct: 169 VGSIVQVTAHHLWHMIVGRFVIGWGVGIASLIIPLYLSEIA 209
>SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter
Ght7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 518
Score = 33.1 bits (72), Expect = 0.043
Identities = 23/74 (31%), Positives = 45/74 (60%), Gaps = 6/74 (8%)
Frame = +2
Query: 542 LGSYGGQLLN----ERVGRRKTIFVSSAPGILGAIMIFFSKMP--VVMYLARFLMGASTG 703
+GS+ G LL+ +++G+R +I V + ++G I+I + +P V + +A+ G S G
Sbjct: 35 VGSFFGCLLSSPVADKIGKRLSIIVWTTVYLIG-IIIQVTTVPSWVQILVAKIWTGLSIG 93
Query: 704 VIAVVTMIYVTEIA 745
++V+T Y +E+A
Sbjct: 94 ALSVITPGYQSEVA 107
>SPBC2F12.14c |gua1||IMP dehydrogenase Gua1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 524
Score = 31.9 bits (69), Expect = 0.100
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +1
Query: 166 DVTETHTDLIPPIQTPASYVEDISVDRKSNLISWLKKNLLPVTEVNDNIV 315
D T+++ P + + E IS++R + ++ KK LPV + +DN+V
Sbjct: 175 DTNTPVTEVMTPREELITTAEGISLERANEMLRKSKKGKLPVVDKDDNLV 224
>SPCC4B3.01 ||SPCP25A2.01c|thiosulfate
sulfurtransferase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 298
Score = 29.9 bits (64), Expect = 0.40
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 7/69 (10%)
Frame = +1
Query: 145 VPGHAIIDVTET--HTD----LIPPIQTPASYVEDISVDRKSNLISWLKKNLLPVTEVND 306
+PG D+ E H + ++PP ASYV + +DR +N+I + +K V
Sbjct: 53 LPGAQYFDIDEAKDHKNPLPHMLPPADEFASYVGKLGIDRNTNVIIYDRKGFFSSPRVFW 112
Query: 307 NI-VFGNLH 330
VFG+ H
Sbjct: 113 TFKVFGHEH 121
>SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 194
Score = 29.9 bits (64), Expect = 0.40
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -1
Query: 715 HGNYARRRPHEKTCKVHHNRHFTKKYHNRT*YSWGRRNKN 596
HG++ R P+ HH RH T YH++ + RR ++
Sbjct: 149 HGSHRRHEPYRTHLSRHH-RHSTTNYHSKRDDRYERRREH 187
>SPBC16A3.13 |meu7|aah4|alpha-amylase homolog
Aah4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 774
Score = 29.5 bits (63), Expect = 0.53
Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = -1
Query: 724 HCHHGNYARRRPHEKTCKVHHN-RHFTKKYHNR 629
HCHHG + R PH T H +H +H R
Sbjct: 286 HCHHGKFPRPIPHNGTKPDHKPWKHEEHCHHGR 318
Score = 28.7 bits (61), Expect = 0.93
Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 12/45 (26%)
Frame = -1
Query: 724 HCHHGNYARRRP------------HEKTCKVHHNRHFTKKYHNRT 626
HCHHG + R P HE+ C HH++ HN T
Sbjct: 313 HCHHGRFPRPVPHNGTKPDHKPWKHEEHCSCHHDKFSRPVPHNGT 357
Score = 28.3 bits (60), Expect = 1.2
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -1
Query: 724 HCHHGNYARRRPHEKTCKVH 665
HCHHG + R PH T H
Sbjct: 201 HCHHGKFPRPVPHNGTKPDH 220
Score = 28.3 bits (60), Expect = 1.2
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -1
Query: 724 HCHHGNYARRRPHEKTCKVH 665
HCHHG + R PH T H
Sbjct: 369 HCHHGKFLRPVPHNVTKPDH 388
Score = 28.3 bits (60), Expect = 1.2
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -1
Query: 724 HCHHGNYARRRPHEKTCKVH 665
HCHHG + R PH T H
Sbjct: 396 HCHHGKFPRPVPHNGTKPDH 415
>SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 855
Score = 27.5 bits (58), Expect = 2.1
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +1
Query: 145 VPGHAIIDVTETHTDLIPP-IQTPASYVEDISVDRKSNL 258
V G+ I DV+ + ++ P IQ+P SYV S++ S+L
Sbjct: 367 VSGNNIFDVSRNNHEVSSPLIQSPGSYVSMPSINMVSSL 405
>SPAC29A4.19c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1096
Score = 27.5 bits (58), Expect = 2.1
Identities = 10/23 (43%), Positives = 13/23 (56%), Gaps = 4/23 (17%)
Frame = -2
Query: 189 ICMC----FCNIYYCMAGYNHCV 133
+C+C CNIY C A NH +
Sbjct: 1041 VCLCTTIGLCNIYLCFANENHII 1063
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 26.2 bits (55), Expect = 5.0
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +1
Query: 190 LIPPIQTPASYVEDISVDRKSNLISWLKKNLLPVTEVNDNIVF 318
LI + P+S+ +S D SNLI +K V ++ND+I F
Sbjct: 2918 LILTLVDPSSFARSLSFDDVSNLIEQIK-----VLDLNDSIRF 2955
>SPBC839.08c |its8||pig-N |Schizosaccharomyces pombe|chr 2|||Manual
Length = 935
Score = 26.2 bits (55), Expect = 5.0
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = -2
Query: 498 SSVIFTPASPLDNFGIAGEGHANVAPVNINVNEAQIPAKYCTFLFVDSAIS 346
+S+ F P SPL N+ N +I E +I ++C F F + +S
Sbjct: 386 TSIFFRPYSPLRNYTEVQASFYNSVIADIESGEYEIAIEHC-FHFSQTVLS 435
>SPCC16A11.01 ||SPCC63.15|conserved fungal
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 328
Score = 25.8 bits (54), Expect = 6.6
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +1
Query: 259 ISWLKKNLLPVTEVNDNIVFGNLHFNYNQ*NGRIHKEKSAIFSGNLCLI 405
+S++ K ++ V + I FG LH NY + R ++S +CL+
Sbjct: 177 VSFIFKFVIIVVGIICAIAFGGLHHNYRGRSARFEWVVCFLWSIYICLL 225
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 25.8 bits (54), Expect = 6.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 356 ESTKRKVQYLAGICASLT 409
E+TKR +QYLA I +S T
Sbjct: 178 ENTKRIIQYLAAIASSTT 195
>SPCC74.04 |||amino acid permease, unknown 15|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 557
Score = 25.4 bits (53), Expect = 8.7
Identities = 25/109 (22%), Positives = 43/109 (39%), Gaps = 9/109 (8%)
Frame = -2
Query: 441 GHANVAPVNINVNEAQIPAKYCTFLFVDSAISLIVIKM*ISKYNIVIHFCNWQQILFQPR 262
G N+ N V Q+ F+ ++ + K I+K N V + N +
Sbjct: 171 GAVNIGNPNYEVQNYQLFLVSIAIQFIHFILASMPTKY-IAKLNSVGTYLNTLFLFISMI 229
Query: 261 Y*IRFSIHTNVFNVTSRCLNR------W---YQICMCFCNIYYCMAGYN 142
+ S + FN TS+ + W + I M FC + + M+GY+
Sbjct: 230 VILAMSSKNHGFNETSKVWSHIENYTDWPDGFAILMSFCGVIWTMSGYD 278
>SPBC1709.15c |cft2||cleavage factor two Cft2/polyadenylation factor
CPSF-73 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 797
Score = 25.4 bits (53), Expect = 8.7
Identities = 12/49 (24%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +1
Query: 196 PPIQTPASYVEDIS---VDRKSNLISWLKKNLLPVTEVNDNIV-FGNLH 330
PP+ P ++ S +D ++I W+ N++ +N+N++ F N++
Sbjct: 251 PPLPFPILFLSPTSTKTIDYAKSMIEWMGDNIVRDFGINENLLEFRNIN 299
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,214,741
Number of Sequences: 5004
Number of extensions: 69686
Number of successful extensions: 225
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 222
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 355273338
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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