Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt19o17
(621 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 25 0.60
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 25 0.60
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 25 0.60
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 25 0.60
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 23 1.8
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 23 3.2
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 22 4.2
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 22 4.2
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 22 4.2
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 21 9.7
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 25.0 bits (52), Expect = 0.60
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +1
Query: 100 PEILFKLFKNILKMSNASFG*NKNTYTKKSHSHL 201
P+I+ L N + +N + N N Y KK + ++
Sbjct: 79 PKIISSLSNNTIHNNNYKYNYNNNNYNKKLYYNI 112
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 25.0 bits (52), Expect = 0.60
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +1
Query: 100 PEILFKLFKNILKMSNASFG*NKNTYTKKSHSHL 201
P+I+ L N + +N + N N Y KK + ++
Sbjct: 79 PKIISSLSNNTIHNNNYKYNYNNNNYNKKLYYNI 112
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 25.0 bits (52), Expect = 0.60
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +1
Query: 100 PEILFKLFKNILKMSNASFG*NKNTYTKKSHSHL 201
P+I+ L N + +N + N N Y KK + ++
Sbjct: 79 PKIISSLSNNTIHNNNYKYNYNNNNYNKKLYYNI 112
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 25.0 bits (52), Expect = 0.60
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +1
Query: 100 PEILFKLFKNILKMSNASFG*NKNTYTKKSHSHL 201
P+I+ L N + +N + N N Y KK + ++
Sbjct: 79 PKIISSLSNNTIHNNNYKYNYNNNNYNKKLYYNI 112
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 23.4 bits (48), Expect = 1.8
Identities = 9/44 (20%), Positives = 24/44 (54%)
Frame = +1
Query: 199 LGSDYCYILSFINICNIKQLFFFLLYHVL*NYSLMYSIAFYIYF 330
+G+++ Y + + C + Q FF+ +Y L ++ + + +Y+
Sbjct: 180 MGNEHTYSETGPSHCVVCQNFFYQIYATLGSFYIPLFVMIQVYY 223
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 22.6 bits (46), Expect = 3.2
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 199 LGSDYCYILSFINICNIKQLFFFL 270
LGS C + IN+C +LF +L
Sbjct: 180 LGSCKCIYVQSINLCMAGRLFGYL 203
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 4.2
Identities = 8/32 (25%), Positives = 16/32 (50%)
Frame = +1
Query: 100 PEILFKLFKNILKMSNASFG*NKNTYTKKSHS 195
P+I+ L N + +N + N N Y +++
Sbjct: 78 PKIISSLSNNTIHNNNYKYNYNNNNYNNNNYN 109
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 4.2
Identities = 8/32 (25%), Positives = 16/32 (50%)
Frame = +1
Query: 100 PEILFKLFKNILKMSNASFG*NKNTYTKKSHS 195
P+I+ L N + +N + N N Y +++
Sbjct: 78 PKIISSLSNNTIHNNNYKYNYNNNNYNNNNYN 109
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 22.2 bits (45), Expect = 4.2
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = -3
Query: 613 IYFIIFKLKLFGLRFLVTFKLSHNLSQTTYNY 518
IY IIF +FG T + + QT NY
Sbjct: 46 IYMIIFVTGIFGNITTCTVIIKNPAMQTATNY 77
Score = 22.2 bits (45), Expect = 4.2
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +3
Query: 252 ATILFFIIPCLIKL 293
+TI+FF+IP LI L
Sbjct: 216 STIIFFLIPMLIIL 229
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 21.0 bits (42), Expect = 9.7
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1
Query: 433 INFFIVD*YINSILI 477
+ FF++D YI SILI
Sbjct: 231 MGFFMMDYYIPSILI 245
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,782
Number of Sequences: 438
Number of extensions: 2909
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18460203
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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