Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt19o01
         (736 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    66   3e-13
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         29   0.060
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    29   0.060
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    29   0.060
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    26   0.42 
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    23   3.0  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   6.9  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   9.1  

>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 66.1 bits (154), Expect = 3e-13
 Identities = 33/108 (30%), Positives = 56/108 (51%)
 Frame = +1

Query: 226 ETEYDYIIVGSGTAGSIIAHRIATETNYTYIVLEAGSKGHGLLDIPVLSPFLHKSVYDWN 405
           +  YD+I+VG G A +++A R++  +N+  ++LEAG       +IP           DW 
Sbjct: 66  DLSYDFIVVGGGAARAVVAGRLSEVSNWKVLLLEAGPDEPAGAEIPSNLQLYLGGDLDWK 125

Query: 406 YETSPQENACWGMVDHKCRLPQGKIVGGSSKLNNMVHVRGNISHYADW 549
           Y T+ + +AC       C  P+GK +GG++  + M + RG+   Y  W
Sbjct: 126 YYTTNESHACLS-TGGSCYWPRGKNLGGTTLHHGMAYHRGHRKDYERW 172


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 28.7 bits (61), Expect = 0.060
 Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
 Frame = +1

Query: 193 DIFASIYLKTVETEYDYII---VGSGTAGSIIAHRIATETNYTYIVLEAGSKGHGLL 354
           D+  S  LK VE  +D  +    G G   S+    +   TN   +V  A  KG GL+
Sbjct: 158 DLTTSQLLKQVEIPHDVAVNATTGKGRLSSLAVQSLDCNTNSDTMVYIADEKGEGLI 214


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 28.7 bits (61), Expect = 0.060
 Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
 Frame = +1

Query: 193 DIFASIYLKTVETEYDYII---VGSGTAGSIIAHRIATETNYTYIVLEAGSKGHGLL 354
           D+  S  LK VE  +D  +    G G   S+    +   TN   +V  A  KG GL+
Sbjct: 158 DLTTSQLLKQVEIPHDVAVNATTGKGRLSSLAVQSLDCNTNSDTMVYIADEKGEGLI 214


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 28.7 bits (61), Expect = 0.060
 Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
 Frame = +1

Query: 193 DIFASIYLKTVETEYDYII---VGSGTAGSIIAHRIATETNYTYIVLEAGSKGHGLL 354
           D+  S  LK VE  +D  +    G G   S+    +   TN   +V  A  KG GL+
Sbjct: 158 DLTTSQLLKQVEIPHDVAVNATTGKGRLSSLAVQSLDCNTNSDTMVYIADEKGEGLI 214


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 25.8 bits (54), Expect = 0.42
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +1

Query: 178 IIYYSDIFASIYLKTVETEYDYIIVGSGTAGSI 276
           + +Y      I+ K  E + DY++ G+GT G+I
Sbjct: 189 LAHYDQTAIEIW-KQCEGKIDYLVAGAGTGGTI 220


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 12/47 (25%), Positives = 20/47 (42%)
 Frame = +1

Query: 181 IYYSDIFASIYLKTVETEYDYIIVGSGTAGSIIAHRIATETNYTYIV 321
           ++  D+  S  LK VE  +D    G G   S+    + +     Y+V
Sbjct: 159 LFAFDLNTSQLLKQVEIPHDVATTGKGELVSLTVQAMDSTNTMVYMV 205


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 463 VCIYGQPCPSKHFPV 419
           VC+  + CP +H PV
Sbjct: 103 VCVCMRKCPRRHRPV 117


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +3

Query: 243 YYCWIWHSWLHNSTSHSHR 299
           +YC  W+++  N TS  H+
Sbjct: 10  HYCLRWNNYQSNMTSVFHQ 28


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,900
Number of Sequences: 438
Number of extensions: 4876
Number of successful extensions: 18
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22901220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)