Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt19n08
(717 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC032522-1|AAH32522.1| 230|Homo sapiens MRPL47 protein protein. 131 2e-30
AF285120-1|AAG01157.1| 252|Homo sapiens CGI-204 protein. 130 5e-30
BC021575-1|AAH21575.1| 140|Homo sapiens mitochondrial ribosomal... 58 2e-08
AY212270-1|AAO92749.1| 140|Homo sapiens nasopharyngeal carcinom... 58 2e-08
BC036530-1|AAH36530.1| 554|Homo sapiens similar to hypothetical... 35 0.25
BC018938-1|AAH18938.3| 256|Homo sapiens NSMCE1 protein protein. 32 1.8
J03069-1|AAA59883.1| 357|Homo sapiens MYCL2 protein. 32 2.4
AC004081-1|AAB97938.1| 358|Homo sapiens WUGSC:H_DJ0320J15.1 pro... 32 2.4
BC103894-1|AAI03895.1| 266|Homo sapiens MAGEC3 protein protein. 31 5.4
BC103893-1|AAI03894.1| 346|Homo sapiens MAGEC3 protein protein. 31 5.4
BC112275-1|AAI12276.1| 1011|Homo sapiens hypothetical protein LO... 30 7.2
BC101628-1|AAI01629.1| 1011|Homo sapiens family with sequence si... 30 7.2
AL512363-1|CAI15113.1| 1011|Homo sapiens el gene, the 5' end of ... 30 7.2
AL049555-1|CAI21667.1| 1011|Homo sapiens protein ( Human DNA seq... 30 7.2
AK055204-1|BAB70873.1| 811|Homo sapiens protein ( Homo sapiens ... 30 7.2
D31888-1|BAA06686.1| 396|Homo sapiens KIAA0071 protein. 30 9.5
AF155595-1|AAF01498.1| 482|Homo sapiens CoREST protein protein. 30 9.5
>BC032522-1|AAH32522.1| 230|Homo sapiens MRPL47 protein protein.
Length = 230
Score = 131 bits (317), Expect = 2e-30
Identities = 77/209 (36%), Positives = 111/209 (53%)
Frame = +2
Query: 77 MRSQKSINTAAACIVKRDFHTTKPTQDLMEFFDAKKNWPETNIRVGRAWKLDELRLKSNT 256
++S +S+ T HTT + L EFFD KNW + ++ G AW +LR KSN
Sbjct: 17 LKSSRSLITPQVPACTGLLHTTLSRKGLEEFFDDPKNWGQEKVKSGAAWTCQQLRNKSNE 76
Query: 257 DLHKLWYVLLKERNMLYTMEHECNERVRLFPNPERIDKVEESMNNIESVIRERNIAYYKL 436
DLHKLWYVLLKERNML T+E E + P+PER+DKV +SM+ ++ V++ER A L
Sbjct: 77 DLHKLWYVLLKERNMLLTLEQEAKRQRLPMPSPERLDKVVDSMDALDKVVQEREDALRLL 136
Query: 437 ETGETGERPVKDVINLIGMPEKYQPSEYDTPKFMNTRWVRPYLKHGFINSLAVKKFRRLY 616
+TG+ RP ++ G ++ ++ P +N R Y + F V F RL
Sbjct: 137 QTGQERARPGAWRRDIFGRIIWHKFKQWVIPWHLNKR----YNRKRFFALPYVDHFLRLE 192
Query: 617 NEKIHSEVRKAHNRDFNHVQHLLNRFPNL 703
EK + N + + LL +FP+L
Sbjct: 193 REKRARIKARKENLERKKAKILLKKFPHL 221
>AF285120-1|AAG01157.1| 252|Homo sapiens CGI-204 protein.
Length = 252
Score = 130 bits (314), Expect = 5e-30
Identities = 75/193 (38%), Positives = 105/193 (54%)
Frame = +2
Query: 125 RDFHTTKPTQDLMEFFDAKKNWPETNIRVGRAWKLDELRLKSNTDLHKLWYVLLKERNML 304
R HTT + L EFFD KNW + ++ G AW +LR KSN DLHKLWYVLLKERNML
Sbjct: 55 RLLHTTLSRKGLEEFFDDPKNWGQEKVKSGAAWTCQQLRNKSNEDLHKLWYVLLKERNML 114
Query: 305 YTMEHECNERVRLFPNPERIDKVEESMNNIESVIRERNIAYYKLETGETGERPVKDVINL 484
T+E E + P+PER+DKV +SM+ ++ V++ER A L+TG+ RP ++
Sbjct: 115 LTLEQEAKRQRLPMPSPERLDKVVDSMDALDKVVQEREDALRLLQTGQERARPGAWRRDI 174
Query: 485 IGMPEKYQPSEYDTPKFMNTRWVRPYLKHGFINSLAVKKFRRLYNEKIHSEVRKAHNRDF 664
G ++ ++ P +N R Y + F V F RL EK + N +
Sbjct: 175 FGRIIWHKFKQWVIPWHLNKR----YNRKRFFALPYVDHFLRLEREKRARIKARKENLER 230
Query: 665 NHVQHLLNRFPNL 703
+ LL +FP+L
Sbjct: 231 KKAKILLKKFPHL 243
>BC021575-1|AAH21575.1| 140|Homo sapiens mitochondrial ribosomal
protein L47 protein.
Length = 140
Score = 58.4 bits (135), Expect = 2e-08
Identities = 41/135 (30%), Positives = 66/135 (48%)
Frame = +2
Query: 299 MLYTMEHECNERVRLFPNPERIDKVEESMNNIESVIRERNIAYYKLETGETGERPVKDVI 478
ML T+E E + P+PER+DKV +SM+ ++ V++ER A L+TG+ RP
Sbjct: 1 MLLTLEQEAKRQRLPMPSPERLDKVVDSMDALDKVVQEREDALRLLQTGQERARPGAWRR 60
Query: 479 NLIGMPEKYQPSEYDTPKFMNTRWVRPYLKHGFINSLAVKKFRRLYNEKIHSEVRKAHNR 658
++ G ++ ++ P +N R Y + F V F RL EK + N
Sbjct: 61 DIFGRIIWHKFKQWVIPWHLNKR----YNRKRFFALPYVDHFLRLEREKRARIKARKENL 116
Query: 659 DFNHVQHLLNRFPNL 703
+ + LL +FP+L
Sbjct: 117 ERKKAKILLKKFPHL 131
>AY212270-1|AAO92749.1| 140|Homo sapiens nasopharyngeal carcinoma
metastasis-related 1 protein.
Length = 140
Score = 58.4 bits (135), Expect = 2e-08
Identities = 41/135 (30%), Positives = 66/135 (48%)
Frame = +2
Query: 299 MLYTMEHECNERVRLFPNPERIDKVEESMNNIESVIRERNIAYYKLETGETGERPVKDVI 478
ML T+E E + P+PER+DKV +SM+ ++ V++ER A L+TG+ RP
Sbjct: 1 MLLTLEQEAKRQRLPMPSPERLDKVVDSMDALDKVVQEREDALRLLQTGQERARPGAWRR 60
Query: 479 NLIGMPEKYQPSEYDTPKFMNTRWVRPYLKHGFINSLAVKKFRRLYNEKIHSEVRKAHNR 658
++ G ++ ++ P +N R Y + F V F RL EK + N
Sbjct: 61 DIFGRIIWHKFKQWVIPWHLNKR----YNRKRFFALPYVDHFLRLEREKRARIKARKENL 116
Query: 659 DFNHVQHLLNRFPNL 703
+ + LL +FP+L
Sbjct: 117 ERKKAKILLKKFPHL 131
>BC036530-1|AAH36530.1| 554|Homo sapiens similar to hypothetical
protein protein.
Length = 554
Score = 35.1 bits (77), Expect = 0.25
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = +2
Query: 284 LKERNMLYTMEHE-CNERVRLFPNPERIDKVEESMNNIESVIRERNIAYYKLETGETGER 460
L E + L T+E E C + V + PE I KVE M N + + +E+ + + GE+
Sbjct: 476 LPEEDRLETVERELCEQNVEVMLTPEMI-KVEFPMLNYKDIRKEKEVKDQAQPAEKAGEK 534
Query: 461 PVKDVINLIG 490
++++ NL G
Sbjct: 535 LLEEMRNLRG 544
>BC018938-1|AAH18938.3| 256|Homo sapiens NSMCE1 protein protein.
Length = 256
Score = 32.3 bits (70), Expect = 1.8
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = +2
Query: 254 TDLHKLWYVLLKERNML--YTMEHECNERVRLFPNPERIDKVEESMNNIESVIRERNIAY 427
TD+H+ + LL +L + ++ ++ +DK+E+ +NNI SV+ I
Sbjct: 2 TDVHRRFLQLLMTHGVLEEWDVKRLQTHCYKVHDRSATVDKLEDFINNINSVLESLYIEI 61
Query: 428 YKLETGETGERPVKDVINL 484
+ T + G RP+ ++NL
Sbjct: 62 KRGVTEDDG-RPIYALVNL 79
>J03069-1|AAA59883.1| 357|Homo sapiens MYCL2 protein.
Length = 357
Score = 31.9 bits (69), Expect = 2.4
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +2
Query: 389 NIESVIRERNIAYYKLETGETGERPVKDVINLIGMPEKYQPSEYDTPKF 535
N S+IR R+ + T E ER V D++ +G P Y P E+ TP +
Sbjct: 79 NYASLIR-RDCMWSGFSTQEPLERAVSDLL-AVGAPSGYSPKEFATPDY 125
>AC004081-1|AAB97938.1| 358|Homo sapiens WUGSC:H_DJ0320J15.1
protein.
Length = 358
Score = 31.9 bits (69), Expect = 2.4
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +2
Query: 389 NIESVIRERNIAYYKLETGETGERPVKDVINLIGMPEKYQPSEYDTPKF 535
N S+IR R+ + T E ER V D++ +G P Y P E+ TP +
Sbjct: 80 NYASLIR-RDCMWSGFSTQEPLERAVSDLL-AVGAPSGYSPKEFATPDY 126
>BC103894-1|AAI03895.1| 266|Homo sapiens MAGEC3 protein protein.
Length = 266
Score = 30.7 bits (66), Expect = 5.4
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = +2
Query: 455 ERPVKDVINLIGMPEKYQPSEYDTP-KFMNTRWV-RPYLKHGFINSLAVKKFRRLYNEKI 628
E + +V++ IG+ + Y P K + WV R YL++ + + A ++ L+ +
Sbjct: 187 EEVIWEVLSAIGVCAGREHFIYGDPRKLLTIHWVQRKYLEYREVPNSAPPRYEFLWGPRA 246
Query: 629 HSEVRKAHNRDF 664
HSE K R F
Sbjct: 247 HSEASKRSLRVF 258
>BC103893-1|AAI03894.1| 346|Homo sapiens MAGEC3 protein protein.
Length = 346
Score = 30.7 bits (66), Expect = 5.4
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = +2
Query: 455 ERPVKDVINLIGMPEKYQPSEYDTP-KFMNTRWV-RPYLKHGFINSLAVKKFRRLYNEKI 628
E + +V++ IG+ + Y P K + WV R YL++ + + A ++ L+ +
Sbjct: 267 EEVIWEVLSAIGVCAGREHFIYGDPRKLLTIHWVQRKYLEYREVPNSAPPRYEFLWGPRA 326
Query: 629 HSEVRKAHNRDF 664
HSE K R F
Sbjct: 327 HSEASKRSLRVF 338
>BC112275-1|AAI12276.1| 1011|Homo sapiens hypothetical protein
LOC222584 protein.
Length = 1011
Score = 30.3 bits (65), Expect = 7.2
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 575 FINSLAVKKFRRLYNEKIHSEVRKAHNRDFNHVQHLLNRFPNLDMDT 715
F N LA +K L + +S VR++ N NH++ L R P L+ T
Sbjct: 444 FANRLAQRKTTNLADR--NSNVRRSFNGTDNHIRFLQQRMPTLEHTT 488
>BC101628-1|AAI01629.1| 1011|Homo sapiens family with sequence
similarity 83, member B protein.
Length = 1011
Score = 30.3 bits (65), Expect = 7.2
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 575 FINSLAVKKFRRLYNEKIHSEVRKAHNRDFNHVQHLLNRFPNLDMDT 715
F N LA +K L + +S VR++ N NH++ L R P L+ T
Sbjct: 444 FANRLAQRKTTNLADR--NSNVRRSFNGTDNHIRFLQQRMPTLEHTT 488
>AL512363-1|CAI15113.1| 1011|Homo sapiens el gene, the 5' end of the
gene for a novel proteinA, member 8) protein.
Length = 1011
Score = 30.3 bits (65), Expect = 7.2
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 575 FINSLAVKKFRRLYNEKIHSEVRKAHNRDFNHVQHLLNRFPNLDMDT 715
F N LA +K L + +S VR++ N NH++ L R P L+ T
Sbjct: 444 FANRLAQRKTTNLADR--NSNVRRSFNGTDNHIRFLQQRMPTLEHTT 488
>AL049555-1|CAI21667.1| 1011|Homo sapiens protein ( Human DNA
sequence from clone RP3-523K23 on chromosome 6p12.1-12.3
Contains the 3' end of the gene for a novel protein.
).
Length = 1011
Score = 30.3 bits (65), Expect = 7.2
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 575 FINSLAVKKFRRLYNEKIHSEVRKAHNRDFNHVQHLLNRFPNLDMDT 715
F N LA +K L + +S VR++ N NH++ L R P L+ T
Sbjct: 444 FANRLAQRKTTNLADR--NSNVRRSFNGTDNHIRFLQQRMPTLEHTT 488
>AK055204-1|BAB70873.1| 811|Homo sapiens protein ( Homo sapiens
cDNA FLJ30642 fis, clone CTONG2002965. ).
Length = 811
Score = 30.3 bits (65), Expect = 7.2
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 575 FINSLAVKKFRRLYNEKIHSEVRKAHNRDFNHVQHLLNRFPNLDMDT 715
F N LA +K L + +S VR++ N NH++ L R P L+ T
Sbjct: 444 FANRLAQRKTTNLADR--NSNVRRSFNGTDNHIRFLQQRMPTLEHTT 488
>D31888-1|BAA06686.1| 396|Homo sapiens KIAA0071 protein.
Length = 396
Score = 29.9 bits (64), Expect = 9.5
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 389 NIESVIRERNIAYYKLET-GETGERPVKDVINLIGMPEK 502
NI+ V++E + K ET G + ++PVK N I MPE+
Sbjct: 343 NIDEVLQEWEAEHGKEETNGPSNQKPVKSPDNSIKMPEE 381
>AF155595-1|AAF01498.1| 482|Homo sapiens CoREST protein protein.
Length = 482
Score = 29.9 bits (64), Expect = 9.5
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 389 NIESVIRERNIAYYKLET-GETGERPVKDVINLIGMPEK 502
NI+ V++E + K ET G + ++PVK N I MPE+
Sbjct: 429 NIDEVLQEWEAEHGKEETNGPSNQKPVKSPDNSIKMPEE 467
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,196,442
Number of Sequences: 237096
Number of extensions: 2359806
Number of successful extensions: 4654
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 4428
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4654
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8399192100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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