Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt19m22
(638 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0712 + 23803597-23803945,23804118-23805479,23805743-238058... 64 1e-10
08_02_1102 + 24319569-24319917,24320120-24321496,24321819-243220... 62 4e-10
07_03_0394 - 17633753-17636788 55 4e-08
01_01_0994 - 7861310-7862119,7862378-7862498,7862718-7862901,786... 52 4e-07
02_02_0631 - 12397517-12398452,12398693-12398819,12398971-123991... 52 5e-07
06_02_0041 + 10889741-10890092,10890161-10890235,10891139-108923... 51 9e-07
05_04_0073 + 17669311-17671635 46 2e-05
02_03_0065 - 14629676-14629804,14631119-14631247,14631383-146317... 46 3e-05
04_04_1357 + 32860677-32860781,32861484-32861588,32861678-328617... 44 8e-05
04_04_1695 + 35433975-35437040 42 5e-04
02_02_0710 + 13173074-13173187,13173495-13173590,13174624-13174911 42 5e-04
07_01_0061 - 451093-451377,451501-451596,451714-451824 41 0.001
04_04_1636 + 34951841-34954322,34954440-34954627,34955737-349558... 40 0.001
09_04_0741 - 19852339-19852497,19853185-19853246,19853352-198534... 38 0.005
06_03_0752 - 24171847-24174321 38 0.005
10_05_0093 - 9108883-9109068,9109156-9109248,9109363-9109441,910... 34 0.11
12_01_0549 + 4396159-4397327,4397341-4398353,4398609-4398676,439... 33 0.14
10_08_0683 - 19860777-19861070,19861677-19861874,19862498-198626... 33 0.19
03_01_0130 - 1007433-1007712,1007739-1007803,1007804-1008001,100... 32 0.33
12_01_0770 + 7010266-7010557,7010805-7010920,7011009-7011206,701... 29 2.4
12_01_0199 - 1467137-1467172,1467302-1467391,1468304-1468396,146... 29 3.1
02_05_1297 - 35536193-35536312,35536405-35536467,35536610-355369... 29 3.1
10_08_0785 - 20536265-20537032 28 5.4
04_04_0906 - 29297188-29297706 28 7.2
10_08_1058 + 22608852-22609172,22609257-22610651 27 9.5
>06_03_0712 +
23803597-23803945,23804118-23805479,23805743-23805811,
23806050-23806330,23806817-23807076,23807521-23807689,
23807796-23808068,23808251-23808499
Length = 1003
Score = 63.7 bits (148), Expect = 1e-10
Identities = 46/130 (35%), Positives = 73/130 (56%), Gaps = 4/130 (3%)
Frame = +2
Query: 143 VQVTVQKARGLLIKGKNGTNNCFVTIALGKEKFQTSVKHKATQNVEWLEECELPIPTQGN 322
+QV V +ARGL +GT++ FV + LGK + +T+V + T W EE + G+
Sbjct: 3 LQVRVVEARGLPAVRVDGTSDPFVKLQLGKRRAKTAVARR-TLAPAWDEEFSFLV---GD 58
Query: 323 TA-EVVLKVYDED-FVKDHLLGQVSIPLKDLDVYE--RPRNRWYKLQGKSGKENDKDRGE 490
A E+V+ V +ED + + LLG+V +PL D+ + WY+LQ KS K K RGE
Sbjct: 59 IAEELVVSVLNEDKYFSNDLLGKVRVPLADVMETDDLSLGTAWYQLQPKSKKSKKKSRGE 118
Query: 491 IEVKIAFTVK 520
+ + I+ + +
Sbjct: 119 VCLCISLSTR 128
>08_02_1102 +
24319569-24319917,24320120-24321496,24321819-24322001,
24322147-24322460,24322515-24322631,24323057-24323313,
24323504-24323684,24323802-24324074,24324535-24324729
Length = 1081
Score = 62.1 bits (144), Expect = 4e-10
Identities = 46/127 (36%), Positives = 68/127 (53%), Gaps = 5/127 (3%)
Frame = +2
Query: 143 VQVTVQKARGLLIKGKNGTNNCFVTIALGKEKFQTSVKHKATQNVEWLEECELPIPTQGN 322
+ V V +AR L NG ++ +V + LGK++F+T V K N W +E + G+
Sbjct: 3 LNVRVIEARNLRAMDSNGFSDPYVKLQLGKQRFKTKVV-KKNLNPAWDQEFSFSV---GD 58
Query: 323 TAEVV-LKVYDEDFVK-DHLLGQVSIPLKDL---DVYERPRNRWYKLQGKSGKENDKDRG 487
+V+ L VYDED + D LGQV +PL+D+ D Y RW++L K E D G
Sbjct: 59 VRDVLKLYVYDEDMIGIDDFLGQVKVPLEDVLAADNYSLGA-RWFQLLPKGKTEKAIDCG 117
Query: 488 EIEVKIA 508
EI V ++
Sbjct: 118 EICVAMS 124
>07_03_0394 - 17633753-17636788
Length = 1011
Score = 55.2 bits (127), Expect = 4e-08
Identities = 41/124 (33%), Positives = 65/124 (52%), Gaps = 5/124 (4%)
Frame = +2
Query: 149 VTVQKARGLLIKGKNGTNNCFVTIALGKEKFQTSVKHKATQNVEWLEECELPIPTQGNTA 328
V V KAR L G+ + +V + LG K +T K Q EW E P +T+
Sbjct: 279 VRVVKARDLPHMDITGSLDPYVEVHLGNYKMKTRHFEK-NQRPEWDEVFAFPREVMQSTS 337
Query: 329 -EVVLKVYDEDFVKDHLLGQVSIPLKDLDVYERPRN----RWYKLQGKSGKENDKDRGEI 493
EV++K D+DF++D +G+VSI L ++ + P + WY+L GK G +D+GE+
Sbjct: 338 LEVIVK--DKDFIRDDYVGRVSIDLNEVPLRVPPDSPLAPEWYRLVGKEG---HRDKGEL 392
Query: 494 EVKI 505
+ +
Sbjct: 393 MLAV 396
Score = 33.5 bits (73), Expect = 0.14
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Frame = +2
Query: 122 KMWDPTHVQVTVQKARGLLIKGKNGTNNCFVTIALGKEKFQTSVKHKATQNVEWLEECEL 301
+MW +V+V V A+ + +N + FV + LG + +T T+N W EE +
Sbjct: 434 RMW---YVRVNVIGAQDIFPM-ENHIPDVFVKVRLGHQMLKTRPARSPTRNFMWNEEM-M 488
Query: 302 PIPTQGNTAEVVLKVYDEDFV-KDHLLGQVSIPLKDL 409
+ + ++++++ D KD ++G+ IPL L
Sbjct: 489 FVAAEPFEEDLIIQIEDRVAQNKDEVIGETMIPLARL 525
>01_01_0994 -
7861310-7862119,7862378-7862498,7862718-7862901,
7862975-7863070,7863428-7863476,7863555-7863596,
7863684-7863836,7865631-7865705,7866462-7866587
Length = 551
Score = 52.0 bits (119), Expect = 4e-07
Identities = 36/137 (26%), Positives = 70/137 (51%)
Frame = +2
Query: 140 HVQVTVQKARGLLIKGKNGTNNCFVTIALGKEKFQTSVKHKATQNVEWLEECELPIPTQG 319
+V++ + + + NG ++ +V LG KFQT ++ K T + +W EE ++PI +
Sbjct: 163 YVKLEILEGSDMKPSDMNGLSDPYVKGRLGPFKFQTQIQKK-TLSPKWFEEFKIPITSWE 221
Query: 320 NTAEVVLKVYDEDFVKDHLLGQVSIPLKDLDVYERPRNRWYKLQGKSGKENDKDRGEIEV 499
+ E+ ++V D+D + D LG +I + +L +R ++W L K K R + +
Sbjct: 222 SLNELAMEVCDKDHMFDDSLGTCTIDIHELRGGQR-HDKWISL-----KNVKKGRIHLAI 275
Query: 500 KIAFTVKEGSLTDLSKK 550
+ +E L + S+K
Sbjct: 276 TVEDISEEKGLEESSRK 292
>02_02_0631 -
12397517-12398452,12398693-12398819,12398971-12399154,
12399303-12399395,12400029-12400077,12400565-12400624,
12400689-12400730,12400840-12400992,12401075-12401206,
12401313-12401408,12401936-12402079,12402234-12402308,
12403896-12404021
Length = 738
Score = 51.6 bits (118), Expect = 5e-07
Identities = 33/110 (30%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Frame = +2
Query: 140 HVQVTVQKARGLLIKGKNGTNNCFVTIALGKEKFQTSVKHKATQNVEWLEECELPIPTQG 319
H +V + + + NG + +V LG +FQT + HK T N +W+EE ++P+ +
Sbjct: 306 HAKVEILEGADMKPSDPNGLADPYVKGHLGPYRFQTKI-HKKTLNPKWMEEFKIPVTSWA 364
Query: 320 NTAEVVLKVYDEDFVKDHLLGQVSIPLKDLDVYERPRNRWYKLQG-KSGK 466
+ L+V D+D + D LG SI + L +R + W L+ K+G+
Sbjct: 365 ALNLLSLQVRDKDPIFDDTLGDCSISINKLRGGQR-HDIWIALKNIKTGR 413
>06_02_0041 +
10889741-10890092,10890161-10890235,10891139-10892341,
10892970-10893253,10893343-10893459,10894126-10894388,
10894557-10894725,10894838-10895110,10895674-10895718,
10896472-10896591,10896926-10896987,10897296-10897318,
10897911-10898128
Length = 1067
Score = 50.8 bits (116), Expect = 9e-07
Identities = 41/115 (35%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
Frame = +2
Query: 149 VTVQKARGL-LIKGKNGTNNCFVTIALGKEKFQTSVKHKATQNVEWLEECELPIPTQGNT 325
V V +AR L I G G ++ + + LG+++ +T V K T + W EE + +
Sbjct: 5 VQVSEARNLPAIDGGGGLSDPYAKLQLGRQRGKTRVA-KRTLSPTWDEEFAFRVVDLKD- 62
Query: 326 AEVVLKVYDED-FVKDHLLGQVSIPLKD-LDVYERP-RNRWYKLQGKSGKENDKD 481
E+V+ V DED + D LGQV +PL LD R +WY+L KS K KD
Sbjct: 63 -ELVVVVVDEDRYFSDDFLGQVRVPLSAVLDADNRSLGTQWYQLLPKSKKSKIKD 116
>05_04_0073 + 17669311-17671635
Length = 774
Score = 46.4 bits (105), Expect = 2e-05
Identities = 37/127 (29%), Positives = 64/127 (50%), Gaps = 5/127 (3%)
Frame = +2
Query: 140 HVQVTVQKARGLLIKGKNGTNNCFVTIALGKEKFQTSVKHKATQNVEWLEECELPIPT-Q 316
++ V V KA+ L K G+ + +V + LG K T K T N EW + Q
Sbjct: 41 YLYVRVVKAKDLPSKDITGSCDPYVEVKLGNYKGTTRHFEKKT-NPEWNQVFAFSKERIQ 99
Query: 317 GNTAEVVLKVYDEDFVKDHLLGQVSIPLKDLDVYERPRN----RWYKLQGKSGKENDKDR 484
+ E+++K D+DFVKD +G+V L ++ P + +WY+L+ ++G K +
Sbjct: 100 SSVVEIIVK--DKDFVKDDFIGRVLFDLNEVPKRVPPDSPLAPQWYRLEERNG---HKVK 154
Query: 485 GEIEVKI 505
GE+ + +
Sbjct: 155 GELMLAV 161
>02_03_0065 -
14629676-14629804,14631119-14631247,14631383-14631736,
14631817-14632063,14632155-14632231,14632574-14632648,
14632721-14632822,14632966-14633084,14633538-14633627,
14634866-14635022,14635085-14635098,14635425-14635548,
14635628-14635678,14635793-14635891,14636962-14637072
Length = 625
Score = 45.6 bits (103), Expect = 3e-05
Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 7/145 (4%)
Frame = +2
Query: 143 VQVTVQKARGLLIKGKNGTNNCFVTIALGKEKF---QTSVKHKATQNVEWLEECELPIPT 313
+ V + +A L K G ++ +V + L +EK +TSVK ++ N EW E+ +L +
Sbjct: 349 LHVNIVRAVKLTKKDFLGKSDPYVKLKLTEEKLPSKKTSVK-RSNLNPEWNEDFKLVVKD 407
Query: 314 QGNTAEVVLKVYDEDFVKDH-LLGQVSIPLKDL--DVYERPRNRWYKLQGKSGKENDKDR 484
+ A + L VYD + V H +G IPLK+L D + +K + NDK R
Sbjct: 408 PESQA-LELTVYDWEQVGKHDKIGMSVIPLKELIPDEAKSLTLDLHKTMDANDPANDKFR 466
Query: 485 GEIEVKIAF-TVKEGSLTDLSKKDK 556
G++ V + + KEG +D+ D+
Sbjct: 467 GQLTVDVTYKPFKEGD-SDVDTSDE 490
>04_04_1357 +
32860677-32860781,32861484-32861588,32861678-32861728,
32861829-32861949,32862495-32862616,32863032-32863133,
32863226-32863300,32863391-32863470,32863601-32863751,
32863850-32864080,32864221-32864517,32864638-32864751,
32864857-32865030
Length = 575
Score = 44.4 bits (100), Expect = 8e-05
Identities = 36/136 (26%), Positives = 67/136 (49%), Gaps = 4/136 (2%)
Frame = +2
Query: 116 DLKMWDPTHVQVTVQKARGLLIKGKNGTNNCFVTIALGK--EKFQTSVKHKATQNVEWLE 289
DL++ ++V + +AR L K G ++ F + + +K + S N W E
Sbjct: 255 DLELKPVGTLEVKLVQARDLTNKDLIGKSDPFAIVYVRPLPDKMKRSKTINNDLNPIWNE 314
Query: 290 ECELPIPTQGNTAEVVLKVYDEDFVKD-HLLGQVSIPLKDLDVYERPRNRWYKLQGKSGK 466
E I +T V +K+YD+D +++ L+G + LKDL + ++ W KL
Sbjct: 315 HFEF-IVEDADTQTVTVKIYDDDGIQESELIGCAQVTLKDLQP-GKVKDVWLKLVKDLEI 372
Query: 467 END-KDRGEIEVKIAF 511
+ D KDRG++ +++ +
Sbjct: 373 QRDRKDRGQVHLELLY 388
Score = 34.7 bits (76), Expect = 0.063
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 3/113 (2%)
Frame = +2
Query: 143 VQVTVQKARGLLIKGKNGTNNCFVTIAL--GKEKFQTSVKHKATQNVEWLEECELPIPTQ 316
+ VTV L NG ++ +V ++L K K++T V ++ V W + + +
Sbjct: 443 LSVTVISGEDLPAMDMNGKSDPYVVLSLKKSKTKYKTRVVSESLNPV-WNQTFDFVVE-D 500
Query: 317 GNTAEVVLKVYDEDFVKDHLLGQVSIPLKDLDVYERPRNRWYKLQG-KSGKEN 472
G ++L+VYD D +G+ + L + + E ++ +KL+G KSGK N
Sbjct: 501 GLHDMLMLEVYDHDTFSRDYMGRCILTLTKVLIEEDYKDS-FKLEGAKSGKLN 552
>04_04_1695 + 35433975-35437040
Length = 1021
Score = 41.5 bits (93), Expect = 5e-04
Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 6/155 (3%)
Frame = +2
Query: 137 THVQVTVQKARGLLIKGKNGTNNCFVTIALGKEKFQTSVKHKATQNVEWLEECELPIP-T 313
+++ V+V KAR L G + +V + LG K T K N W +
Sbjct: 289 SYLYVSVVKARDLPNMDITGALDPYVEVRLGNFKGVTRHLEK-NPNPVWRQVFAFSRDHL 347
Query: 314 QGNTAEVVLKVYDEDFVKDHLLGQVSIPLKDLDVYERPRN----RWYKLQGKSGKENDKD 481
Q + EVV+K D+D +KD +G+V + D+ P + +WY+L +SG++
Sbjct: 348 QSSQLEVVVK--DKDVLKDDFVGRVVFDMTDIPNRVPPDSPLAPQWYRLADRSGEK--IR 403
Query: 482 RGEIEVKI-AFTVKEGSLTDLSKKDKHRSSLSSLA 583
GEI + + T + + + D H SL SLA
Sbjct: 404 HGEIMLAVWNGTQADEAFPEAWHSDAHSVSLDSLA 438
>02_02_0710 + 13173074-13173187,13173495-13173590,13174624-13174911
Length = 165
Score = 41.5 bits (93), Expect = 5e-04
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Frame = +2
Query: 149 VTVQKARGLLIKGKN-GTNNCFVTIALGKEKFQTSVKHKATQNVEWLEECELPIPTQGNT 325
V V+ RG+ + ++ +++ +V + +GK+K +T V K T N EW +E L I +
Sbjct: 9 VKVRVVRGVNLAVRDLRSSDPYVIVRMGKQKLKTRVIKKTT-NPEWNDELTLSI--EDPA 65
Query: 326 AEVVLKVYDEDFVKDHLLGQVSIPLKDL 409
V L+VYD+D D +G + ++ L
Sbjct: 66 VPVRLEVYDKDTFIDDAMGNAELDIRPL 93
>07_01_0061 - 451093-451377,451501-451596,451714-451824
Length = 163
Score = 40.7 bits (91), Expect = 0.001
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Frame = +2
Query: 143 VQVTVQKARGLLIKGKNGTNNCFVTIALGKEKFQTSVKHKATQNVEWLEECELPIPTQGN 322
+++ V + L + G++ +V + LGK+K +TSVK K+ N W EE L I
Sbjct: 8 LKIRVVRGINLAYRDTRGSDP-YVVLRLGKQKVKTSVKKKSV-NPIWHEELTLSI--MNP 63
Query: 323 TAEVVLKVYDED-FVKDHLLGQVSIPLK 403
A + L V+D+D F +D +G I L+
Sbjct: 64 IAPIKLGVFDKDTFSRDDPMGDAEIDLE 91
>04_04_1636 +
34951841-34954322,34954440-34954627,34955737-34955838,
34956101-34956177,34956258-34956319,34956504-34956511
Length = 972
Score = 40.3 bits (90), Expect = 0.001
Identities = 38/124 (30%), Positives = 57/124 (45%), Gaps = 5/124 (4%)
Frame = +2
Query: 149 VTVQKARGLLIKGKNGTNNCFVTIALGKEKFQTSVKHKATQNVEWLEECELPIPT-QGNT 325
V V KAR L G+ + +V + +G + T K +N EW Q
Sbjct: 278 VRVVKARDLPDMDVTGSLDPYVEVRVGNYRGITRHFEKQ-KNPEWNAVFAFSRDRMQATI 336
Query: 326 AEVVLKVYDEDFVKDHLLGQVSIPLKDLDVYERPRN----RWYKLQGKSGKENDKDRGEI 493
EVV+K D+D +KD +G V L D+ + P + WY+L K+G DK RGE+
Sbjct: 337 LEVVVK--DKDLLKDDFVGLVRFDLNDVPMRVPPDSPLAPEWYRLVHKTG---DKSRGEL 391
Query: 494 EVKI 505
+ +
Sbjct: 392 MLAV 395
>09_04_0741 -
19852339-19852497,19853185-19853246,19853352-19853415,
19853561-19853614,19853744-19853890,19854460-19854564,
19854651-19854794,19854987-19855093,19855613-19855712,
19855804-19855833,19856492-19856608,19856705-19856828,
19857143-19857189,19857272-19857400,19857777-19857852,
19858446-19858543,19858630-19858671,19858811-19859044
Length = 612
Score = 38.3 bits (85), Expect = 0.005
Identities = 30/109 (27%), Positives = 55/109 (50%), Gaps = 1/109 (0%)
Frame = +2
Query: 143 VQVTVQKARGLLIKGKNGTNNCFVTIALGKEKFQTSVKHKATQNVEWLEECELPIPTQGN 322
V++ + A+ L+ NGT++ + I G+EK +S+ ++N W EE + +
Sbjct: 91 VKLELLAAKNLIAANLNGTSDPYALITCGEEKRFSSMV-PGSRNPMWGEEFNFFVDSL-- 147
Query: 323 TAEVVLKVYDEDFV-KDHLLGQVSIPLKDLDVYERPRNRWYKLQGKSGK 466
++ + +YD D V K +LG V +P++ + P WY L SG+
Sbjct: 148 PVKINVTIYDWDIVWKSTVLGSVIVPVES-EGQSGP--VWYTLDSTSGQ 193
>06_03_0752 - 24171847-24174321
Length = 824
Score = 38.3 bits (85), Expect = 0.005
Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 7/134 (5%)
Frame = +2
Query: 113 VDLKMWDPTHVQVTVQKARGLLIKGKNGTNNCFVTIALGKEKFQTSVKHKATQNVEWLEE 292
V K+W +++V V +A+ + + + FV +G + +TSV T N W E+
Sbjct: 231 VSPKLW---YLRVNVIEAQDVQPQARGRAPEVFVKAQVGNQILKTSVVAAPTLNPRWNED 287
Query: 293 CELPIPTQGNTAEVVLKVYDEDFV-KDHLLGQVSIPL----KDLDVYERPRNRWYKLQ-- 451
+ + +++L V D KD LLG+ ++PL K LD ++RW+ L+
Sbjct: 288 LVF-VVAEPFEEQLLLTVEDRVTPRKDDLLGRAALPLALFEKRLDHRPFVQSRWFDLEKF 346
Query: 452 GKSGKENDKDRGEI 493
G G + R E+
Sbjct: 347 GIGGAIEGETRREL 360
>10_05_0093 -
9108883-9109068,9109156-9109248,9109363-9109441,
9109529-9109639,9109715-9109857,9110050-9110522,
9110568-9111075,9111241-9111810,9111883-9112119,
9112196-9112465
Length = 889
Score = 33.9 bits (74), Expect = 0.11
Identities = 32/127 (25%), Positives = 61/127 (48%), Gaps = 7/127 (5%)
Frame = +2
Query: 134 PTHVQVTVQKARGLLIKGKNGTNNCFVTIALGKEKFQTSVKHKATQNVEWLEECELPIPT 313
PTH +TV L+ + N F +A G K KH++ ++ EE ++P+PT
Sbjct: 434 PTHDGITVLGDVVDLVILWHKKNIIFSNVAAGPGKPPRPPKHRSLKDKA--EEAKIPLPT 491
Query: 314 QG-NTAEVVLKVYDEDFVKDHLLGQVSIP----LKDLD--VYERPRNRWYKLQGKSGKEN 472
+G +T ++ K ++ V D V++P L ++ ++E P ++ + +
Sbjct: 492 KGPDTPDLPHKEHEVQSVPDVEEPDVALPDVQVLSSIEPTIHEDPNPTRDPVEETTVEAT 551
Query: 473 DKDRGEI 493
DKD+ E+
Sbjct: 552 DKDKSEV 558
>12_01_0549 +
4396159-4397327,4397341-4398353,4398609-4398676,
4399229-4399291
Length = 770
Score = 33.5 bits (73), Expect = 0.14
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 7/112 (6%)
Frame = +2
Query: 149 VTVQKARGLLIKGKNGTNNCFVTIALGKEKFQTSVKHKATQNVEWLEECELPIPTQGNTA 328
V V KAR L NG+ + +V + G + K +N EW E +
Sbjct: 202 VRVIKARKLPDMDANGSLDPYVEVKFGAYNRGVTRCFKRNKNPEWNETFAFSFQHDKIPS 261
Query: 329 EVV-LKVYDEDFVKDHLLGQVSIPLKDL------DVYERPRNRWYKLQGKSG 463
V + V D+D V+D +G++ + LK++ DV P WY L + G
Sbjct: 262 PTVDIVVNDKDLVRDDFVGKLHLDLKNIPKRSLDDVPLEP--TWYPLLDQDG 311
>10_08_0683 -
19860777-19861070,19861677-19861874,19862498-19862659,
19862763-19862911,19863089-19863236,19863317-19863385,
19863471-19863719,19863937-19864131,19864444-19864560,
19864978-19866537
Length = 1046
Score = 33.1 bits (72), Expect = 0.19
Identities = 29/101 (28%), Positives = 43/101 (42%)
Frame = +2
Query: 164 ARGLLIKGKNGTNNCFVTIALGKEKFQTSVKHKATQNVEWLEECELPIPTQGNTAEVVLK 343
A G + N T++ +VTI + + +N W + +P + AEV
Sbjct: 274 AVGSKMSSANMTSDPYVTIQVSYATVARTYVVPNNENPVWTQN--FLVPVGHDAAEVEFV 331
Query: 344 VYDEDFVKDHLLGQVSIPLKDLDVYERPRNRWYKLQGKSGK 466
V D D L+G VSIP + L ER N Y + +GK
Sbjct: 332 VKDNDVFGAQLIGTVSIPAEKLLFGER-INGIYDVLESNGK 371
>03_01_0130 -
1007433-1007712,1007739-1007803,1007804-1008001,
1008103-1008273,1008405-1008553,1008780-1008927,
1009015-1009083,1009168-1009416,1009516-1009710,
1009869-1009985,1010205-1011329
Length = 921
Score = 32.3 bits (70), Expect = 0.33
Identities = 22/97 (22%), Positives = 41/97 (42%), Gaps = 2/97 (2%)
Frame = +2
Query: 182 KGKNG--TNNCFVTIALGKEKFQTSVKHKATQNVEWLEECELPIPTQGNTAEVVLKVYDE 355
K NG T++ +VT+ L + +N W + +P+ + ++K D
Sbjct: 133 KAANGAMTSDPYVTVQLASATVARTYVVNDDENPVWAQHFLIPVAHEAPAVHFLVK--DS 190
Query: 356 DFVKDHLLGQVSIPLKDLDVYERPRNRWYKLQGKSGK 466
D L+G+V +P + L+ E + L +GK
Sbjct: 191 DVFGAELIGEVVVPAEQLEAGEHVEGVYPVLDPAAGK 227
>12_01_0770 +
7010266-7010557,7010805-7010920,7011009-7011206,
7011354-7011530
Length = 260
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = +3
Query: 156 YKKLVDY*SKGKTVQITVLLPLPSVKKNSKLPLNIKPHRMWNG*KNANYQYLLKETPLKL 335
YKK+ + S+G +++T+ PS+K LP + P W G N + ETP +L
Sbjct: 108 YKKVHERRSEGNIIELTIHGFCPSLKGTKCLPTKVGP---WGG--NGGTPQDITETPKRL 162
>12_01_0199 -
1467137-1467172,1467302-1467391,1468304-1468396,
1468488-1469515,1470005-1470552,1470656-1470695,
1473774-1475196
Length = 1085
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +2
Query: 146 QVTVQKARGLLIKGKNGTNNCFVTIALGKEKFQTSVKHKATQN 274
Q +K+ KG NG+N+ + I ++F +HK T N
Sbjct: 803 QAEYEKSMATYTKGSNGSNDFIIAIGSLDDQFILEDEHKVTAN 845
>02_05_1297 -
35536193-35536312,35536405-35536467,35536610-35536942,
35537098-35537184,35538337-35538399,35538604-35538750,
35538900-35539001,35539069-35539197,35539506-35539664,
35539726-35539967,35540317-35540506,35540692-35540907,
35541536-35541760
Length = 691
Score = 29.1 bits (62), Expect = 3.1
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Frame = +2
Query: 371 HLLGQVSIPLK-DLDVYERPRNRWYKLQGKSGKENDKDRGEIEV---KIAFTVKEGSL 532
HL GQ K D D +ER R K Q K+ + N+K R ++ K + K SL
Sbjct: 428 HLHGQKLHAYKGDYDTFERTREEHLKNQQKAFETNEKARSHMQAFIDKFRYNAKRASL 485
>10_08_0785 - 20536265-20537032
Length = 255
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -1
Query: 614 QCS*GFHQHFVPGWIRRIGACLSC*DP 534
QC GFH V W+R +C SC P
Sbjct: 176 QCGHGFHVACVDTWLRSNSSCPSCRRP 202
>04_04_0906 - 29297188-29297706
Length = 172
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = -1
Query: 629 VFQYCQCS*GFHQHFVPGWIRRIGACLSC*DP 534
V + CS FH + GW+ G C C P
Sbjct: 132 VAELSSCSHAFHAACIDGWVVEAGTCPLCRTP 163
>10_08_1058 + 22608852-22609172,22609257-22610651
Length = 571
Score = 27.5 bits (58), Expect = 9.5
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = -2
Query: 280 FHILCGF-MFNG--SLEFFFTEGNGNKTVICTVFPFD**STSFLYGHLNVSRV 131
F +L G +F+G LEFF+ E G+ IC+ F F S F L V+ V
Sbjct: 457 FVVLAGSDVFSGIAQLEFFYGEAPGSMRSICSAFSFLALSLGFYVNSLVVTIV 509
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,225,078
Number of Sequences: 37544
Number of extensions: 314497
Number of successful extensions: 843
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 836
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1573040476
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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