Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt19m05
(727 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16A3.17c |||membrane transporter|Schizosaccharomyces pombe|c... 39 8e-04
SPBC4F6.09 |str1||siderophore-iron transporter Str1 |Schizosacch... 33 0.042
SPCC18.02 |||membrane transporter|Schizosaccharomyces pombe|chr ... 33 0.055
SPAC14C4.07 |||membrane transporter|Schizosaccharomyces pombe|ch... 29 0.68
SPBC26H8.09c |snf59||SWI/SNF complex subunit Snf59|Schizosacchar... 28 1.6
SPBC13E7.11 ||SPBC30D10.19c|mitochondrial rhomboid protease|Schi... 27 2.1
SPBC1734.04 ||SPBC337.20|mannosyltransferase complex subunit, An... 27 2.7
SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|ch... 27 2.7
SPAC4F10.07c |atg13|apg13, mug78|autophagy associated protein At... 27 3.6
SPCC794.10 |||UTP-glucose-1-phosphate uridylyltransferase |Schiz... 27 3.6
SPAC23H4.15 |||ribosome biogenesis protein Tsr1 |Schizosaccharom... 26 4.8
SPAC17C9.12 |||MSP domain|Schizosaccharomyces pombe|chr 1|||Manual 26 4.8
SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces po... 26 4.8
SPAC10F6.01c ||SPAC4C5.05c|sulfite reductase beta subunit |Schiz... 26 6.3
SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomy... 26 6.3
SPAC31G5.12c |maf1|n150|repressor of RNA polymerase III Maf1 |Sc... 26 6.3
SPBC12C2.13c |fnx1|SPBC21D10.04c|MFS multidrug efflux transporte... 26 6.3
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 25 8.3
SPCC1393.06c |||rRNA processing protein Ipi1|Schizosaccharomyces... 25 8.3
SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces... 25 8.3
SPBC16A3.03c |lyn1||sequence orphan|Schizosaccharomyces pombe|ch... 25 8.3
>SPBC16A3.17c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 599
Score = 38.7 bits (86), Expect = 8e-04
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Frame = +3
Query: 360 PLIGALSDVWGRKFFLLVTVFFTCAPIPL--MTINTWWFFAMISISGV-FAVTFSIVFAY 530
P +G ++ GRK L + +FF L + N W +I G+ S+V
Sbjct: 149 PAVGVFCNILGRKIVLYICIFFFMLGSALCGASQNMIWLIVCRAIQGLGGGGIISLVNII 208
Query: 531 VADVTTEAERSRAYGLVSATFAASLVISPALG 626
++D+T R G+++ + A+LV P +G
Sbjct: 209 ISDITPLRTRPMYSGILATAWGAALVAGPIIG 240
>SPBC4F6.09 |str1||siderophore-iron transporter Str1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 612
Score = 33.1 bits (72), Expect = 0.042
Identities = 35/139 (25%), Positives = 59/139 (42%), Gaps = 7/139 (5%)
Frame = +3
Query: 222 IFLEFFAWGLLT---MPIISVLNATFPDHTFLMNGLIMGIKGILSFLSAPLIGALSDVWG 392
IFL FFA + + + F H+ L I I+S P + LSDV+G
Sbjct: 100 IFLLFFAISFQAECYYSLTAYATSAFAGHSLLST--IAVANNIISAAIKPPLARLSDVFG 157
Query: 393 RKFFLLVTVFFTCAPIPLM----TINTWWFFAMISISGVFAVTFSIVFAYVADVTTEAER 560
R L ++ + LM + T+ +++ +G V I+ ++AD ++ A R
Sbjct: 158 RLEAFLFSLLLYLVGLILMAASTNVQTYAGGSVLYNAGYTGVEL-IMTIFMADTSSMANR 216
Query: 561 SRAYGLVSATFAASLVISP 617
S G+ F ++ I P
Sbjct: 217 SLVLGISYLPFVVTIWIGP 235
>SPCC18.02 |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 448
Score = 32.7 bits (71), Expect = 0.055
Identities = 35/141 (24%), Positives = 59/141 (41%), Gaps = 20/141 (14%)
Frame = +3
Query: 285 TFPDHTFLMNGLIMGIKGILSFLSAPLIGALSDVWG------RKFFLL-VTVFFTCAPIP 443
T D L GL+ G+ F GA+ D G R + +L T+F C P
Sbjct: 277 TLFDFNSLQCGLMFGVLSTPYFFCGAWAGAMVDRRGSRTIGKRAYAILGCTLFLLCIPRT 336
Query: 444 LMTINTWWFFAMISISG-VFAVTFSIVFA----YVADVTTE--------AERSRAYGLVS 584
++N + F A ++I+G V A T S F YVA+ E ++ + +
Sbjct: 337 NTSLNIYLFSAFLAINGVVLAFTSSPGFVQSSHYVAEYELEHPTFFGHNGPYTQLFSAYN 396
Query: 585 ATFAASLVISPALGAYLMDLY 647
++ ++I P + +L D +
Sbjct: 397 IVYSLGMIIGPLVAGFLRDQF 417
>SPAC14C4.07 |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 644
Score = 29.1 bits (62), Expect = 0.68
Identities = 22/112 (19%), Positives = 44/112 (39%), Gaps = 9/112 (8%)
Frame = +3
Query: 330 IKGILSFLSAPLIGALSDVWGRKFFLLVTVFFTC---------APIPLMTINTWWFFAMI 482
+ L S G + D++GR+ L +TV F + P + A+
Sbjct: 195 LAAFLGLFSTAYYGTMGDIYGRRLVLFITVSFLLLGDLWLLYQSYAPKHPYFVLFAAALK 254
Query: 483 SISGVFAVTFSIVFAYVADVTTEAERSRAYGLVSATFAASLVISPALGAYLM 638
+ G + + ++VAD + R+ GL A + + P+L +++
Sbjct: 255 GLGGYISTVVASQNSFVADCSKTEFRAWYLGLNFAAYHLGTALGPSLSGFIV 306
>SPBC26H8.09c |snf59||SWI/SNF complex subunit
Snf59|Schizosaccharomyces pombe|chr 2|||Manual
Length = 515
Score = 27.9 bits (59), Expect = 1.6
Identities = 29/139 (20%), Positives = 46/139 (33%)
Frame = -3
Query: 719 HRDHNKEHVQYSNSGSGSHDEGLSIQIHKVGTQSG*YD*TSRKRSGDEAVRARPLRFGRH 540
H NKE NS + + +I + SG + K+ D + L
Sbjct: 121 HDSSNKESTNLDNSNMDESENQKNFKIEEP-KPSGDFRNEGPKQCDDSKIEKPELHVN-- 177
Query: 539 VSHVREHYRKRDREHSADADHREEPPGIDSHERDRGTCEEYRHQQKELAAPHVRQGSDEW 360
S + E + D EH+ H E H E H + P + ++
Sbjct: 178 -SKIEEPIHRIDSEHNEPEYHTESKNEESEHNTKSIREEPIHHVDSKNEEPVYSKIPEKM 236
Query: 359 RGEERQYALDSHDQSVHQE 303
E + +L D +V QE
Sbjct: 237 GDEFSENSLSKSDSAVKQE 255
>SPBC13E7.11 ||SPBC30D10.19c|mitochondrial rhomboid
protease|Schizosaccharomyces pombe|chr 2|||Manual
Length = 298
Score = 27.5 bits (58), Expect = 2.1
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 228 LEFFAWGLLTMPIISVLNATFPDHTFLMNGLIMG 329
+ F AWGL++ S N T DH + G I G
Sbjct: 232 MAFDAWGLISRGFSSFANFTLIDHAAHLGGGIFG 265
>SPBC1734.04 ||SPBC337.20|mannosyltransferase complex subunit, Anp
family |Schizosaccharomyces pombe|chr 2|||Manual
Length = 430
Score = 27.1 bits (57), Expect = 2.7
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -3
Query: 425 EEYRHQQKELAAPHVRQGSDEWRGEERQYALDSHDQS 315
E+ K++ P+V + +W G E+ Y L+S +S
Sbjct: 233 EDLMRHDKDIIVPNVYRPLPDWLGNEQPYDLNSWAES 269
>SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 628
Score = 27.1 bits (57), Expect = 2.7
Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Frame = +3
Query: 204 FHALVVIFLEFFAWGLLTMPIISVLNATFPDHTFLMNGLIMGIKGILSFLSAPLIGA-LS 380
F ++ V L W + I++VL P H ++ + L L+ LI +S
Sbjct: 449 FSSVTVSLLVAPIWVFDAIAILTVL----PLHDRFHKKMLFFVGSCLFVLAGLLITTFVS 504
Query: 381 DVWGRKFFLLVTVFFTCAPIPLMTINTWWFFAM 479
+VWGR LL+ F +P+ I TW AM
Sbjct: 505 NVWGRYVGLLILGFGLGPTVPI--IMTWVSSAM 535
>SPAC4F10.07c |atg13|apg13, mug78|autophagy associated protein Atg13
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 758
Score = 26.6 bits (56), Expect = 3.6
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = -1
Query: 415 VTNRKNLRPHTSDRAPMSGAERKDSMPLIPMINPFIRNVWSGKVA 281
++N NLR +S P E S +P++N IR+++ V+
Sbjct: 417 ISNTPNLRRFSSSFGPRERKESFSSRNRLPLVNHPIRSIFKHNVS 461
>SPCC794.10 |||UTP-glucose-1-phosphate uridylyltransferase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 499
Score = 26.6 bits (56), Expect = 3.6
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +2
Query: 170 NDNVWNRRAFCFSRSGRYFFGVFRVGLAHYADNIGTERDLSRPHVPDERIDHGN 331
N V +++ F FF ++R L H + D RP P++ ID+G+
Sbjct: 38 NSRVSDKKTFGIQMDN--FFALYRRYLLHTVKGYECDWDSIRPLGPEDMIDYGD 89
>SPAC23H4.15 |||ribosome biogenesis protein Tsr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 26.2 bits (55), Expect = 4.8
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = -3
Query: 536 SHVREHYRKRDREHSADADHREEPPGIDSHERDRGTCEEYRHQQKEL 396
+HV E D E + D D + E S E + EEYR +QKEL
Sbjct: 423 NHVAEEKIDSDEEETID-DAKSEMFVDLSEEEEVRQYEEYRKKQKEL 468
>SPAC17C9.12 |||MSP domain|Schizosaccharomyces pombe|chr 1|||Manual
Length = 319
Score = 26.2 bits (55), Expect = 4.8
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = -1
Query: 595 ANVAETRPYARDRSASVVTSATYANTIENVTAN 497
A VAE PY + +S TS N TAN
Sbjct: 218 ATVAENEPYPKPQSVPTTTSPNNENNALRSTAN 250
>SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 26.2 bits (55), Expect = 4.8
Identities = 15/61 (24%), Positives = 24/61 (39%)
Frame = -3
Query: 596 RKRSGDEAVRARPLRFGRHVSHVREHYRKRDREHSADADHREEPPGIDSHERDRGTCEEY 417
RKRS D + +H+ + +Y KRDR+ H DR + + Y
Sbjct: 289 RKRSRDNNLSRESSVSSKHLDYNSRNYNKRDRDPDRTKYREYHSERRKQHRTDRYSDDYY 348
Query: 416 R 414
+
Sbjct: 349 Q 349
>SPAC10F6.01c ||SPAC4C5.05c|sulfite reductase beta subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1473
Score = 25.8 bits (54), Expect = 6.3
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = -3
Query: 539 VSHVREHYRKRDREHSADADHREEPPGIDSHERDRGTCE 423
V+H+ ++ D E + PP D ERD T E
Sbjct: 208 VAHIPIEEKQEDSEKEGNIKEAFVPPKFDQPERDAATSE 246
>SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 559
Score = 25.8 bits (54), Expect = 6.3
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 7/94 (7%)
Frame = +3
Query: 390 GRKFFLLVTVFFTCAPIPLM-----TINTWWFFAMISISGVFAV--TFSIVFAYVADVTT 548
GRK+ L +F T ++ TI+T FA I+ F+ + F Y A+V
Sbjct: 407 GRKWIQLQGLFITGLMFAILAGSWDTISTGGRFACFVIAQFFSNFGPNATTFLYPAEVFP 466
Query: 549 EAERSRAYGLVSATFAASLVISPALGAYLMDLYG 650
R A+GL +A +++ L +L + G
Sbjct: 467 ARVRGTAHGLSAALGKCGAILASLLFNFLTSVIG 500
>SPAC31G5.12c |maf1|n150|repressor of RNA polymerase III Maf1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 215
Score = 25.8 bits (54), Expect = 6.3
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +3
Query: 258 MPIISVLNATFPDHTF 305
M I++ LNA++PDH F
Sbjct: 66 MYIVATLNASYPDHDF 81
>SPBC12C2.13c |fnx1|SPBC21D10.04c|MFS multidrug efflux
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 531
Score = 25.8 bits (54), Expect = 6.3
Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = +3
Query: 252 LTMPIISVLNATFPDHTFLMNGLIMGIKGILSFLSA--PLIGALSDVWGRKFFLLVTVFF 425
L M I++ L LMN + L +A PL G LSD++GR+ TV F
Sbjct: 46 LDMTIVASLYPVIGSEFKLMNNASYIVTAYLITNTAFQPLYGRLSDIFGRR----PTVVF 101
Query: 426 TCAPIPLMTINTWW 467
A T+ T+W
Sbjct: 102 ANA---AFTLGTFW 112
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 25.4 bits (53), Expect = 8.3
Identities = 15/70 (21%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = -3
Query: 416 RHQQKELAAPHVRQGSDEWRGEERQYALDSHDQSVHQERVVGKGRVQYRYYRH--SEQAP 243
R Q+K+ ++ ++ + +ER+ L Q +E++ + R++ + E+
Sbjct: 648 REQEKKQQELERQKREEKQKQKEREKKLKKQQQEADREKMAREQRLREEEEKRILEERKR 707
Query: 242 REKLQKNNDQ 213
REKL K ++
Sbjct: 708 REKLDKEEEE 717
>SPCC1393.06c |||rRNA processing protein Ipi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 408
Score = 25.4 bits (53), Expect = 8.3
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -1
Query: 337 PLIPMINPFIRNVWS 293
PLIP I FIRN WS
Sbjct: 298 PLIPGIIEFIRNSWS 312
>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3699
Score = 25.4 bits (53), Expect = 8.3
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +3
Query: 231 EFFAWGLLTMPIISVLNATFPDHTFLMNGLIMGIKG 338
E +A LT+PI L+ P FLM LI+ +KG
Sbjct: 815 ELYAELCLTLPIR--LSVLLPHMNFLMKPLIVALKG 848
>SPBC16A3.03c |lyn1||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 658
Score = 25.4 bits (53), Expect = 8.3
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2
Query: 149 NSYERRDNDNVWNRRAFCFSRSGRYFFGVFR 241
NS+ D+ V N + FCFS S + F R
Sbjct: 232 NSHLGMDSSTVSNLKRFCFSESLGHIFAPLR 262
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,681,300
Number of Sequences: 5004
Number of extensions: 54859
Number of successful extensions: 229
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 228
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 341222980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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