Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt19m01
         (262 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    21   3.3  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    21   3.3  
DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein ...    20   4.4  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    20   4.4  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    20   4.4  
AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor prot...    20   4.4  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    20   5.8  

>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 20.6 bits (41), Expect = 3.3
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -1

Query: 244 TVYCYTKIQQSFPSGQSEA 188
           T  C++ +  + PSGQ++A
Sbjct: 75  TAGCHSNLLSTSPSGQNKA 93


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 20.6 bits (41), Expect = 3.3
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -1

Query: 244 TVYCYTKIQQSFPSGQSEA 188
           T  C++ +  + PSGQ++A
Sbjct: 75  TAGCHSNLLSTSPSGQNKA 93


>DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein 5
           protein.
          Length = 104

 Score = 20.2 bits (40), Expect = 4.4
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +3

Query: 42  MKFLLFCAMCILVYGNSEDDLS 107
           +K LLF  +  L+   ++DD+S
Sbjct: 3   IKILLFFTILALINVKAQDDIS 24


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 20.2 bits (40), Expect = 4.4
 Identities = 11/41 (26%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = +1

Query: 46  SFYYFVQCAF*FTETVKMICP*KRPDVGSTAENV-SRKATA 165
           + YY++   F F ++  ++ P   P  G+T + +  +K+TA
Sbjct: 17  ALYYYLTSTFDFWKSRGVVGPKPVPFFGTTKDLILVKKSTA 57


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 20.2 bits (40), Expect = 4.4
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = +3

Query: 153 KGYCSQSLIYEEASDCPEGNDC 218
           KG+  +S+       C  GN+C
Sbjct: 208 KGFFRRSITKNAVYQCKYGNNC 229


>AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor
           protein.
          Length = 72

 Score = 20.2 bits (40), Expect = 4.4
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = +3

Query: 153 KGYCSQSLIYEEASDCPEGNDC 218
           KG+  +S+       C  GN+C
Sbjct: 5   KGFFRRSITKNAVYQCKYGNNC 26


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 19.8 bits (39), Expect = 5.8
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -1

Query: 232 YTKIQQSFPSG 200
           Y ++QQS P G
Sbjct: 75  YARVQQSMPDG 85


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,696
Number of Sequences: 438
Number of extensions: 1283
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  4762122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)