Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt19l03
(736 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC017708-1|AAH17708.1| 375|Homo sapiens ubiquitin-conjugating e... 124 3e-28
AY948200-1|AAY23342.1| 422|Homo sapiens galactosyl transferase-... 112 1e-24
AY112698-1|AAM60814.1| 422|Homo sapiens ubiquitin-conjugating e... 112 1e-24
AL592078-5|CAI16186.1| 422|Homo sapiens ubiquitin-conjugating e... 112 1e-24
BC107057-1|AAI07058.1| 341|Homo sapiens UBE2Q1 protein protein. 93 7e-19
BC061583-1|AAH61583.1| 223|Homo sapiens UBE2Q1 protein protein. 63 9e-10
BC087836-1|AAH87836.1| 256|Homo sapiens UBE2Q1 protein protein. 61 4e-09
BC070158-1|AAH70158.1| 294|Homo sapiens UBE2Q1 protein protein. 61 4e-09
BC000848-1|AAH00848.1| 230|Homo sapiens UBE2Q1 protein protein. 61 4e-09
AK056388-1|BAB71173.1| 217|Homo sapiens protein ( Homo sapiens ... 61 4e-09
BC006827-1|AAH06827.1| 199|Homo sapiens UBE2Q2 protein protein. 58 3e-08
BC107432-1|AAI07433.1| 188|Homo sapiens RWD domain containing 4... 30 7.5
BC067752-1|AAH67752.1| 188|Homo sapiens RWD domain containing 4... 30 7.5
BC017472-1|AAH17472.1| 188|Homo sapiens RWD domain containing 4... 30 7.5
>BC017708-1|AAH17708.1| 375|Homo sapiens ubiquitin-conjugating
enzyme E2Q (putative) 2 protein.
Length = 375
Score = 124 bits (300), Expect = 3e-28
Identities = 77/214 (35%), Positives = 120/214 (56%), Gaps = 8/214 (3%)
Frame = +3
Query: 117 LKLEIKTLEQVFPKNHERFQIMSASVDELTCRF-VGKNGKKYEI------HANITETYPT 275
LK E+K L +F KNHERF+I+S +DEL C+F V + G + + H NITE+YP+
Sbjct: 6 LKAELKFLASIFDKNHERFRIVSWKLDELHCQFLVPQQGSPHSLPPPLTLHCNITESYPS 65
Query: 276 TPPVWFAESEDPIVTNAVQILTNTQGRDNHVINQVGILLRELCKLHGVPEXXXXXXXXXX 455
+ P+WF +SEDP +T+ ++ L +T+ +N + Q+ L+ ELC L+ +P+
Sbjct: 66 SSPIWFVDSEDPNLTSVLERLEDTK-NNNLLRQQLKWLICELCSLYNLPKHLDVEMLDQP 124
Query: 456 VHPAPPQHRVPSVTSNXXXXXXXXXXXXXXXXXXXXXXXXLPLEMVEDAGRSNKDD-MET 632
+ P VTS E +G+ ++D+ +E
Sbjct: 125 L-PTGQNGTTEEVTSEEEEEEEEMAEDIEDLDHYEMK------EEEPISGKKSEDEGIEK 177
Query: 633 EHLATLERLRQNQRQDYLSGSVSGSLQATDRLMK 734
E+LA LE++R+ QRQD+L+G+VSGS+QA+DRLMK
Sbjct: 178 ENLAILEKIRKTQRQDHLNGAVSGSVQASDRLMK 211
>AY948200-1|AAY23342.1| 422|Homo sapiens galactosyl
transferase-associated protein protein.
Length = 422
Score = 112 bits (269), Expect = 1e-24
Identities = 72/227 (31%), Positives = 113/227 (49%), Gaps = 21/227 (9%)
Frame = +3
Query: 117 LKLEIKTLEQVFPKNHERFQIMSASVDELTCRFV-------------GKN--------GK 233
L+ E+K LE +F + HERF+I SA +DEL+C F+ G + G
Sbjct: 41 LRRELKLLESIFHRGHERFRIASACLDELSCEFLLAGAGGAGAGAAPGPHLPPRGSVPGD 100
Query: 234 KYEIHANITETYPTTPPVWFAESEDPIVTNAVQILTNTQGRDNHVINQVGILLRELCKLH 413
IH NITE+YP PP+W ES+DP + ++ L + + + ++ + ++ +LCKL+
Sbjct: 101 PVRIHCNITESYPAVPPIWSVESDDPNLAAVLERLVDIKKGNTLLLQHLKRIISDLCKLY 160
Query: 414 GVPEXXXXXXXXXXVHPAPPQHRVPSVTSNXXXXXXXXXXXXXXXXXXXXXXXXLPLEMV 593
+P+ P P + S+ + E
Sbjct: 161 NLPQHPDVEMLD---QPLPAEQCTQEDVSSEDEDEEMPEDTEDLDHYE------MKEEEP 211
Query: 594 EDAGRSNKDDMETEHLATLERLRQNQRQDYLSGSVSGSLQATDRLMK 734
+ +S D + E+LA LE++++NQRQDYL+G+VSGS+QATDRLMK
Sbjct: 212 AEGKKSEDDGIGKENLAILEKIKKNQRQDYLNGAVSGSVQATDRLMK 258
>AY112698-1|AAM60814.1| 422|Homo sapiens ubiquitin-conjugating
enzyme E2Q protein.
Length = 422
Score = 112 bits (269), Expect = 1e-24
Identities = 72/227 (31%), Positives = 113/227 (49%), Gaps = 21/227 (9%)
Frame = +3
Query: 117 LKLEIKTLEQVFPKNHERFQIMSASVDELTCRFV-------------GKN--------GK 233
L+ E+K LE +F + HERF+I SA +DEL+C F+ G + G
Sbjct: 41 LRRELKLLESIFHRGHERFRIASACLDELSCEFLLAGAGGAGAGAAPGPHLPPRGSVPGD 100
Query: 234 KYEIHANITETYPTTPPVWFAESEDPIVTNAVQILTNTQGRDNHVINQVGILLRELCKLH 413
IH NITE+YP PP+W ES+DP + ++ L + + + ++ + ++ +LCKL+
Sbjct: 101 PVRIHCNITESYPAVPPIWSVESDDPNLAAVLERLVDIKKGNTLLLQHLKRIISDLCKLY 160
Query: 414 GVPEXXXXXXXXXXVHPAPPQHRVPSVTSNXXXXXXXXXXXXXXXXXXXXXXXXLPLEMV 593
+P+ P P + S+ + E
Sbjct: 161 NLPQHPDVEMLD---QPLPAEQCTQEDVSSEDEDEEMPEDTEDLDHYE------MKEEEP 211
Query: 594 EDAGRSNKDDMETEHLATLERLRQNQRQDYLSGSVSGSLQATDRLMK 734
+ +S D + E+LA LE++++NQRQDYL+G+VSGS+QATDRLMK
Sbjct: 212 AEGKKSEDDGIGKENLAILEKIKKNQRQDYLNGAVSGSVQATDRLMK 258
>AL592078-5|CAI16186.1| 422|Homo sapiens ubiquitin-conjugating
enzyme E2Q (putative) 1 protein.
Length = 422
Score = 112 bits (269), Expect = 1e-24
Identities = 72/227 (31%), Positives = 113/227 (49%), Gaps = 21/227 (9%)
Frame = +3
Query: 117 LKLEIKTLEQVFPKNHERFQIMSASVDELTCRFV-------------GKN--------GK 233
L+ E+K LE +F + HERF+I SA +DEL+C F+ G + G
Sbjct: 41 LRRELKLLESIFHRGHERFRIASACLDELSCEFLLAGAGGAGAGAAPGPHLPPRGSVPGD 100
Query: 234 KYEIHANITETYPTTPPVWFAESEDPIVTNAVQILTNTQGRDNHVINQVGILLRELCKLH 413
IH NITE+YP PP+W ES+DP + ++ L + + + ++ + ++ +LCKL+
Sbjct: 101 PVRIHCNITESYPAVPPIWSVESDDPNLAAVLERLVDIKKGNTLLLQHLKRIISDLCKLY 160
Query: 414 GVPEXXXXXXXXXXVHPAPPQHRVPSVTSNXXXXXXXXXXXXXXXXXXXXXXXXLPLEMV 593
+P+ P P + S+ + E
Sbjct: 161 NLPQHPDVEMLD---QPLPAEQCTQEDVSSEDEDEEMPEDTEDLDHYE------MKEEEP 211
Query: 594 EDAGRSNKDDMETEHLATLERLRQNQRQDYLSGSVSGSLQATDRLMK 734
+ +S D + E+LA LE++++NQRQDYL+G+VSGS+QATDRLMK
Sbjct: 212 AEGKKSEDDGIGKENLAILEKIKKNQRQDYLNGAVSGSVQATDRLMK 258
>BC107057-1|AAI07058.1| 341|Homo sapiens UBE2Q1 protein protein.
Length = 341
Score = 93.5 bits (222), Expect = 7e-19
Identities = 53/169 (31%), Positives = 85/169 (50%)
Frame = +3
Query: 228 GKKYEIHANITETYPTTPPVWFAESEDPIVTNAVQILTNTQGRDNHVINQVGILLRELCK 407
G IH NITE+YP PP+W ES+DP + ++ L + + + ++ + ++ +LCK
Sbjct: 18 GDPVRIHCNITESYPAVPPIWSVESDDPNLAAVLERLVDIKKGNTLLLQHLKRIISDLCK 77
Query: 408 LHGVPEXXXXXXXXXXVHPAPPQHRVPSVTSNXXXXXXXXXXXXXXXXXXXXXXXXLPLE 587
L+ +P+ P P + S+ + E
Sbjct: 78 LYNLPQHPDVEMLD---QPLPAEQCTQEDVSSEDEDEEMPEDTEDLDHYE------MKEE 128
Query: 588 MVEDAGRSNKDDMETEHLATLERLRQNQRQDYLSGSVSGSLQATDRLMK 734
+ +S D + E+LA LE++++NQRQDYL+G+VSGS+QATDRLMK
Sbjct: 129 EPAEGKKSEDDGIGKENLAILEKIKKNQRQDYLNGAVSGSVQATDRLMK 177
>BC061583-1|AAH61583.1| 223|Homo sapiens UBE2Q1 protein protein.
Length = 223
Score = 63.3 bits (147), Expect = 9e-10
Identities = 32/56 (57%), Positives = 45/56 (80%), Gaps = 4/56 (7%)
Frame = +3
Query: 579 PLEMVEDA---GRSNKDD-METEHLATLERLRQNQRQDYLSGSVSGSLQATDRLMK 734
P EM E+ G+ ++DD + E+LA LE++++NQRQDYL+G+VSGS+QATDRLMK
Sbjct: 4 PYEMKEEEPAEGKKSEDDGIGKENLAILEKIKKNQRQDYLNGAVSGSVQATDRLMK 59
>BC087836-1|AAH87836.1| 256|Homo sapiens UBE2Q1 protein protein.
Length = 256
Score = 61.3 bits (142), Expect = 4e-09
Identities = 28/45 (62%), Positives = 40/45 (88%), Gaps = 1/45 (2%)
Frame = +3
Query: 603 GRSNKDD-METEHLATLERLRQNQRQDYLSGSVSGSLQATDRLMK 734
G+ ++DD + E+LA LE++++NQRQDYL+G+VSGS+QATDRLMK
Sbjct: 48 GKKSEDDGIGKENLAILEKIKKNQRQDYLNGAVSGSVQATDRLMK 92
>BC070158-1|AAH70158.1| 294|Homo sapiens UBE2Q1 protein protein.
Length = 294
Score = 61.3 bits (142), Expect = 4e-09
Identities = 28/45 (62%), Positives = 40/45 (88%), Gaps = 1/45 (2%)
Frame = +3
Query: 603 GRSNKDD-METEHLATLERLRQNQRQDYLSGSVSGSLQATDRLMK 734
G+ ++DD + E+LA LE++++NQRQDYL+G+VSGS+QATDRLMK
Sbjct: 86 GKKSEDDGIGKENLAILEKIKKNQRQDYLNGAVSGSVQATDRLMK 130
>BC000848-1|AAH00848.1| 230|Homo sapiens UBE2Q1 protein protein.
Length = 230
Score = 61.3 bits (142), Expect = 4e-09
Identities = 28/45 (62%), Positives = 40/45 (88%), Gaps = 1/45 (2%)
Frame = +3
Query: 603 GRSNKDD-METEHLATLERLRQNQRQDYLSGSVSGSLQATDRLMK 734
G+ ++DD + E+LA LE++++NQRQDYL+G+VSGS+QATDRLMK
Sbjct: 22 GKKSEDDGIGKENLAILEKIKKNQRQDYLNGAVSGSVQATDRLMK 66
>AK056388-1|BAB71173.1| 217|Homo sapiens protein ( Homo sapiens
cDNA FLJ31826 fis, clone NT2RP6000086, highly similar to
Homo sapiens mRNA for NICE-5 protein. ).
Length = 217
Score = 61.3 bits (142), Expect = 4e-09
Identities = 28/45 (62%), Positives = 40/45 (88%), Gaps = 1/45 (2%)
Frame = +3
Query: 603 GRSNKDD-METEHLATLERLRQNQRQDYLSGSVSGSLQATDRLMK 734
G+ ++DD + E+LA LE++++NQRQDYL+G+VSGS+QATDRLMK
Sbjct: 9 GKKSEDDGIGKENLAILEKIKKNQRQDYLNGAVSGSVQATDRLMK 53
>BC006827-1|AAH06827.1| 199|Homo sapiens UBE2Q2 protein protein.
Length = 199
Score = 58.0 bits (134), Expect = 3e-08
Identities = 26/46 (56%), Positives = 41/46 (89%), Gaps = 1/46 (2%)
Frame = +3
Query: 600 AGRSNKDD-METEHLATLERLRQNQRQDYLSGSVSGSLQATDRLMK 734
+G+ ++D+ +E E+LA LE++R+ QRQD+L+G+VSGS+QA+DRLMK
Sbjct: 51 SGKKSEDEGIEKENLAILEKIRKTQRQDHLNGAVSGSVQASDRLMK 96
>BC107432-1|AAI07433.1| 188|Homo sapiens RWD domain containing 4A
protein.
Length = 188
Score = 30.3 bits (65), Expect = 7.5
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Frame = +3
Query: 120 KLEIKTLEQVFPKNHERFQIMSASVDELTCRFVGKNG--KKYEIHANITETYPTTPPV 287
++E++ L ++ + E F+ +S + +G+NG K + I + TETYP TPP+
Sbjct: 8 EMELEALRSIY-EGDESFRELSPVSFQYR---IGENGDPKAFLIEISWTETYPQTPPI 61
>BC067752-1|AAH67752.1| 188|Homo sapiens RWD domain containing 4A
protein.
Length = 188
Score = 30.3 bits (65), Expect = 7.5
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Frame = +3
Query: 120 KLEIKTLEQVFPKNHERFQIMSASVDELTCRFVGKNG--KKYEIHANITETYPTTPPV 287
++E++ L ++ + E F+ +S + +G+NG K + I + TETYP TPP+
Sbjct: 8 EMELEALRSIY-EGDESFRELSPVSFQYR---IGENGDPKAFLIEISWTETYPQTPPI 61
>BC017472-1|AAH17472.1| 188|Homo sapiens RWD domain containing 4A
protein.
Length = 188
Score = 30.3 bits (65), Expect = 7.5
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Frame = +3
Query: 120 KLEIKTLEQVFPKNHERFQIMSASVDELTCRFVGKNG--KKYEIHANITETYPTTPPV 287
++E++ L ++ + E F+ +S + +G+NG K + I + TETYP TPP+
Sbjct: 8 EMELEALRSIY-EGDESFRELSPVSFQYR---IGENGDPKAFLIEISWTETYPQTPPI 61
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,640,934
Number of Sequences: 237096
Number of extensions: 2232931
Number of successful extensions: 4677
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4676
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8735159784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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