Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt19k22
         (315 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   2.0  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   2.0  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    20   8.1  
AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced prot...    20   8.1  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    20   8.1  

>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 2.0
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -2

Query: 191 EIRHWNGVTSKIYRLTAWLIGGVVPF 114
           E+RH   V +K Y     L  G+V F
Sbjct: 395 ELRHSRPVPAKKYDCVTLLFSGIVGF 420



 Score = 19.8 bits (39), Expect = 8.1
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +1

Query: 1   IPEECSGGC 27
           IP+ CSG C
Sbjct: 238 IPQVCSGNC 246


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 2.0
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -2

Query: 191 EIRHWNGVTSKIYRLTAWLIGGVVPF 114
           E+RH   V +K Y     L  G+V F
Sbjct: 395 ELRHSRPVPAKKYDCVTLLFSGIVGF 420



 Score = 19.8 bits (39), Expect = 8.1
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +1

Query: 1   IPEECSGGC 27
           IP+ CSG C
Sbjct: 238 IPQVCSGNC 246


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 19.8 bits (39), Expect = 8.1
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = +2

Query: 41  RWNILGV 61
           RWN+LGV
Sbjct: 441 RWNVLGV 447


>AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 87

 Score = 19.8 bits (39), Expect = 8.1
 Identities = 7/22 (31%), Positives = 15/22 (68%), Gaps = 2/22 (9%)
 Frame = -1

Query: 126 RCPVL--NRSLCEWAK*KFCVS 67
           +C +L  NR+ C++ + K C++
Sbjct: 60  QCSILRINRNRCQYCRLKKCIA 81


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 19.8 bits (39), Expect = 8.1
 Identities = 7/22 (31%), Positives = 15/22 (68%), Gaps = 2/22 (9%)
 Frame = -1

Query: 126 RCPVL--NRSLCEWAK*KFCVS 67
           +C +L  NR+ C++ + K C++
Sbjct: 109 QCSILRINRNRCQYCRLKKCIA 130


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,999
Number of Sequences: 438
Number of extensions: 1600
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6719922
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)