Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt19k15
         (669 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC003550-1|AAH03550.2|  327|Homo sapiens chromosome 7 open readi...   189   7e-48
AF132954-1|AAD27729.1|  320|Homo sapiens CGI-20 protein protein.      186   8e-47
AF265555-1|AAF75772.1| 4829|Homo sapiens ubiquitin-conjugating B...    30   8.6  
AB033115-1|BAA86603.2| 2793|Homo sapiens KIAA1289 protein protein.     30   8.6  

>BC003550-1|AAH03550.2|  327|Homo sapiens chromosome 7 open reading
           frame 20 protein.
          Length = 327

 Score =  189 bits (461), Expect = 7e-48
 Identities = 90/191 (47%), Positives = 123/191 (64%), Gaps = 1/191 (0%)
 Frame = +3

Query: 93  RGERGVVRVLDKLEASINSGQYYEAHQMYRTLYFRYLTQKKYPEXXXXXXXXXXXXXERD 272
           R   GV RV  KL AS+  G YYEAHQMYRTL+FRY++Q K+ E                
Sbjct: 18  RNRGGVQRVEGKLRASVEKGDYYEAHQMYRTLFFRYMSQSKHTEARELMYSGALLFFSHG 77

Query: 273 QQGSGADLAILFVEVLTKSETKPNEEWVSKLAKLFELISSSVPERETFLTNSIKWSM-DN 449
           QQ S ADL++L +E L K+E +  +E +  LAK+F L+  + PER TF++ ++KWS   +
Sbjct: 78  QQNSAADLSMLVLESLEKAEVEVADELLENLAKVFSLMDPNSPERVTFVSRALKWSSGGS 137

Query: 450 NKKGDPLLHKKIAEVFWKEKKYTAAHRHFLHSSDGSAYANMLIELHTTKGLKSEIDLFIA 629
            K G P LH+ +A   WKE+ Y  +  HFLHS+DG   ANML+E  T++G +SE+D+F+A
Sbjct: 138 GKLGHPRLHQLLALTLWKEQNYCESRYHFLHSADGEGCANMLVEYSTSRGFRSEVDMFVA 197

Query: 630 QAVLQILCLRN 662
           QAVLQ LCL+N
Sbjct: 198 QAVLQFLCLKN 208


>AF132954-1|AAD27729.1|  320|Homo sapiens CGI-20 protein protein.
          Length = 320

 Score =  186 bits (452), Expect = 8e-47
 Identities = 88/188 (46%), Positives = 122/188 (64%), Gaps = 1/188 (0%)
 Frame = +3

Query: 102 RGVVRVLDKLEASINSGQYYEAHQMYRTLYFRYLTQKKYPEXXXXXXXXXXXXXERDQQG 281
           R V RV  KL AS+  G YYEAHQMYRTL+FRY++Q K+ E                QQ 
Sbjct: 14  RAVQRVEGKLRASVEKGDYYEAHQMYRTLFFRYMSQSKHTEARELMYSGALLFFSHGQQN 73

Query: 282 SGADLAILFVEVLTKSETKPNEEWVSKLAKLFELISSSVPERETFLTNSIKWSM-DNNKK 458
           S ADL++L +E L K+E +  +E +  LAK+F L+  + PER TF++ ++KWS   + K 
Sbjct: 74  SAADLSMLVLESLEKAEVEVADELLENLAKVFSLMDPNSPERVTFVSRALKWSSGGSGKL 133

Query: 459 GDPLLHKKIAEVFWKEKKYTAAHRHFLHSSDGSAYANMLIELHTTKGLKSEIDLFIAQAV 638
           G P LH+ +A   WKE+ Y  +  HFLHS+DG   A+ML+E  T++G +SE+D+F+AQAV
Sbjct: 134 GHPRLHQLLALTLWKEQNYCESRYHFLHSADGEGCADMLVEYSTSRGFRSEVDMFVAQAV 193

Query: 639 LQILCLRN 662
           LQ LCL+N
Sbjct: 194 LQFLCLKN 201


>AF265555-1|AAF75772.1| 4829|Homo sapiens ubiquitin-conjugating
            BIR-domain enzyme APOLLON protein.
          Length = 4829

 Score = 29.9 bits (64), Expect = 8.6
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = -1

Query: 525  EQLCTFFPSKILLLFSCVGVGHLFCCYPLTILLNLLERFLA 403
            EQL  F   ++ +L SC+G   L     L  LLNLL+  L+
Sbjct: 2079 EQLLIFPQDRVFMLLSCIGQRSLSNSGVLESLLNLLDNLLS 2119


>AB033115-1|BAA86603.2| 2793|Homo sapiens KIAA1289 protein protein.
          Length = 2793

 Score = 29.9 bits (64), Expect = 8.6
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = -1

Query: 525 EQLCTFFPSKILLLFSCVGVGHLFCCYPLTILLNLLERFLA 403
           EQL  F   ++ +L SC+G   L     L  LLNLL+  L+
Sbjct: 43  EQLLIFPQDRVFMLLSCIGQRSLSNSGVLESLLNLLDNLLS 83


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,755,864
Number of Sequences: 237096
Number of extensions: 1979590
Number of successful extensions: 3218
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3216
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7591280850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)