Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt19k12
         (732 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D17516-1|BAA04466.1|  525|Homo sapiens PACAP receptor protein.         33   1.4  
BC117116-1|AAI17117.1|  496|Homo sapiens ADCYAP1R1 protein protein.    33   1.4  
AY366498-1|AAQ72806.1|  468|Homo sapiens pituitary adenyl cyclas...    33   1.4  
AB065700-1|BAC05923.1|  468|Homo sapiens seven transmembrane hel...    33   1.4  
BC032846-1|AAH32846.2|  304|Homo sapiens developmental pluripote...    30   9.8  
AY196326-1|AAO40749.1|  930|Homo sapiens truncated ABCC12 protei...    30   9.8  
AK001575-1|BAA91765.1|  294|Homo sapiens protein ( Homo sapiens ...    30   9.8  

>D17516-1|BAA04466.1|  525|Homo sapiens PACAP receptor protein.
          Length = 525

 Score = 32.7 bits (71), Expect = 1.4
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +2

Query: 122 LFNLYLNVIVYKP*NDWQRERLILKCGLGIFVGGKINIALRRLN 253
           LF ++  V  + P N  +RERL+ + GLG F G  + +    LN
Sbjct: 418 LFGIHYTVFAFSPENVSKRERLVFELGLGSFQGFVVAVLYCFLN 461


>BC117116-1|AAI17117.1|  496|Homo sapiens ADCYAP1R1 protein protein.
          Length = 496

 Score = 32.7 bits (71), Expect = 1.4
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +2

Query: 122 LFNLYLNVIVYKP*NDWQRERLILKCGLGIFVGGKINIALRRLN 253
           LF ++  V  + P N  +RERL+ + GLG F G  + +    LN
Sbjct: 389 LFGIHYTVFAFSPENVSKRERLVFELGLGSFQGFVVAVLYCFLN 432


>AY366498-1|AAQ72806.1|  468|Homo sapiens pituitary adenyl cyclase
           activating polypeptide 1 receptor type 1 protein.
          Length = 468

 Score = 32.7 bits (71), Expect = 1.4
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +2

Query: 122 LFNLYLNVIVYKP*NDWQRERLILKCGLGIFVGGKINIALRRLN 253
           LF ++  V  + P N  +RERL+ + GLG F G  + +    LN
Sbjct: 361 LFGIHYTVFAFSPENVSKRERLVFELGLGSFQGFVVAVLYCFLN 404


>AB065700-1|BAC05923.1|  468|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 468

 Score = 32.7 bits (71), Expect = 1.4
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +2

Query: 122 LFNLYLNVIVYKP*NDWQRERLILKCGLGIFVGGKINIALRRLN 253
           LF ++  V  + P N  +RERL+ + GLG F G  + +    LN
Sbjct: 361 LFGIHYTVFAFSPENVSKRERLVFELGLGSFQGFVVAVLYCFLN 404


>BC032846-1|AAH32846.2|  304|Homo sapiens developmental pluripotency
           associated 4 protein.
          Length = 304

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -1

Query: 246 RLSAMFIFPPTNIPNPHLRIN 184
           R+SA+F+ P +N P PHL  N
Sbjct: 264 RVSALFLLPASNFPPPHLEDN 284


>AY196326-1|AAO40749.1|  930|Homo sapiens truncated ABCC12 protein
           protein.
          Length = 930

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 23/93 (24%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
 Frame = -3

Query: 718 SISLSVSFRVISRLRYWSSAFLSEP--SPVTGTHSTIGEVFADRCIAAYSITAMLITMLT 545
           +++ ++++R   RL+   S  + E   S  T TH ++GE+F  +  +A+  +A+L+T   
Sbjct: 181 ALAWAINYRTAIRLKVALSTLVFENLVSFKTLTHISVGEMFMAKLNSAFRRSAILVTDKR 240

Query: 544 LNIKFRRFATMIAMIRHFYRGKQQRFAITSSDV 446
           +      F T I +I+ +    ++ F  T  D+
Sbjct: 241 VQ-TMNEFLTCIRLIKMY--AWEKSFTNTIQDI 270


>AK001575-1|BAA91765.1|  294|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10713 fis, clone NT2RP3000980. ).
          Length = 294

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -1

Query: 246 RLSAMFIFPPTNIPNPHLRIN 184
           R+SA+F+ P +N P PHL  N
Sbjct: 254 RVSALFLLPASNFPPPHLEDN 274


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,118,588
Number of Sequences: 237096
Number of extensions: 2408276
Number of successful extensions: 4808
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4548
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4808
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8679165170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)