Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt19i24
(724 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 35 7e-04
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 30 0.025
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 29 0.044
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 27 0.18
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 25 0.72
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 25 0.72
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 25 0.72
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 25 0.96
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 1.3
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 23 2.2
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 23 2.2
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 23 2.2
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 23 2.2
AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier... 23 2.9
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 23 2.9
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 22 5.1
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 22 5.1
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 35.1 bits (77), Expect = 7e-04
Identities = 19/89 (21%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Frame = +1
Query: 397 KELQNKYEETSKK-LCELSNK-YEQLETLNNENIAKIKDLEKNKDSEAKLEEISLSKLNA 570
+ +QN + SK+ +C + + Y L +L N + KN+ ++E++ +
Sbjct: 20 RHIQNVHTRPSKEPICNICKRVYSSLNSLRNHKSIYHRQHSKNEQQRKEMEQMREREREQ 79
Query: 571 DIASDKIAAQKATEQNKILKQDMQNLEDA 657
SD++ +Q+ +Q + +QD Q + +
Sbjct: 80 REHSDRVTSQQQQQQQQQQQQDQQQQQQS 108
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 29.9 bits (64), Expect = 0.025
Identities = 28/118 (23%), Positives = 57/118 (48%), Gaps = 4/118 (3%)
Frame = +1
Query: 118 KNSSLEQQLKTLQKEKDNIHTHYQHYVIELNEHLKNMVSQNESLAGEVERLSNRETSLVD 297
K S + L LQ + + + +I+ + +++ + +L E + LS ++D
Sbjct: 308 KKSKVNFALPELQHNLNILVDMCEQDIIQNDRRTRHLSDRVVALEAEKKNLSK----VID 363
Query: 298 QISDLEIRLQNYSSYRTQVTETST--SRNNNSDDFKELQNKYEETSK--KLCELSNKY 459
Q S L L+N + ++ + + + +D FK+LQ+KY E K +L EL++ +
Sbjct: 364 QHSQLIDTLENVLAIVDRLMDETNQLTLQETADAFKDLQDKYYEEYKMYELGELASSF 421
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 29.1 bits (62), Expect = 0.044
Identities = 26/122 (21%), Positives = 49/122 (40%)
Frame = +1
Query: 103 ESLKQKNSSLEQQLKTLQKEKDNIHTHYQHYVIELNEHLKNMVSQNESLAGEVERLSNRE 282
E L + L ++ + ++ + + Y E E+ K + E ER ++E
Sbjct: 253 EKLHNEKEKLLEERTSRERYSRSREREQKSYKNE-REYRKYGETSKERSRDRTERERSKE 311
Query: 283 TSLVDQISDLEIRLQNYSSYRTQVTETSTSRNNNSDDFKELQNKYEETSKKLCELSNKYE 462
++ +S+ + NY++Y NNN +++ N Y KKL N E
Sbjct: 312 PKIISSLSN-NYKYSNYNNY-----------NNNYNNYNNYNNNYNNNYKKLYYNINYIE 359
Query: 463 QL 468
Q+
Sbjct: 360 QI 361
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 27.1 bits (57), Expect = 0.18
Identities = 30/129 (23%), Positives = 50/129 (38%), Gaps = 12/129 (9%)
Frame = +1
Query: 202 ELNEHLKNMVSQNESLAGEVERLSNRETSLVDQISDLEIRLQNYSSYRTQVTETSTSRNN 381
++ EH +V E E ++ + SL + D + YS E S SR+
Sbjct: 188 KIKEHDTVLVVNIEKSGNESKKYATSSNSLRSRTHDFQHTSSRYSR------ERSCSRDR 241
Query: 382 NSDDFKELQNKYEE------------TSKKLCELSNKYEQLETLNNENIAKIKDLEKNKD 525
N + +KE +YE+ TS+K S + EQ N + K ++ K +
Sbjct: 242 NRE-YKEKDRRYEKLHNEKEKLLEERTSRKRYSCSREREQKSYKNENSYRKYRETSKERS 300
Query: 526 SEAKLEEIS 552
+ E S
Sbjct: 301 RDRTERERS 309
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 25.0 bits (52), Expect = 0.72
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +1
Query: 58 YASTSDGRNTNVESNESLKQKNSSLEQQLKTLQKEKDN 171
YAS SD + N+E + S L + Q E DN
Sbjct: 327 YASRSDMHSDNIEKKYPPSETEQSTSMDLPSDQVEPDN 364
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 25.0 bits (52), Expect = 0.72
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +1
Query: 58 YASTSDGRNTNVESNESLKQKNSSLEQQLKTLQKEKDN 171
YAS SD + N+E + S L + Q E DN
Sbjct: 327 YASRSDMHSDNIEKKYPPSETEQSTSMDLPSDQVEPDN 364
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 25.0 bits (52), Expect = 0.72
Identities = 17/74 (22%), Positives = 30/74 (40%)
Frame = +1
Query: 115 QKNSSLEQQLKTLQKEKDNIHTHYQHYVIELNEHLKNMVSQNESLAGEVERLSNRETSLV 294
+K LE+ +T +K Q N + K + E +ER +RE ++
Sbjct: 258 EKEKLLEE--RTSRKRYSRSREREQRSYKNENSYRKYRETSKERSRDRIERERSREPKII 315
Query: 295 DQISDLEIRLQNYS 336
+S+ I NY+
Sbjct: 316 SSLSNNTIHNNNYN 329
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 24.6 bits (51), Expect = 0.96
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +1
Query: 361 TSTSRNNNSDDFKELQNKYEETSKKLCELSNKYEQL 468
+S S N N ++ N Y +KKL N EQ+
Sbjct: 83 SSLSNNYNYSNYNNYNNNYNNYNKKLYYNINYIEQI 118
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 1.3
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = +1
Query: 340 YRTQVTETSTSRNNNSDDFKELQNKYEETSKKLCELSNKYEQLETLNNENIAKIKDL 510
++ E T NSD + E T K C S+ + N EN+ K+K+L
Sbjct: 159 FKQNKEEEQTINRKNSDYLDNQEVSMENTENKSCTDSDIEKYKMFCNLENV-KLKEL 214
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 23.4 bits (48), Expect = 2.2
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = +1
Query: 367 TSRNNNSDDFKELQNKYEETSKKLCELSNKYEQL 468
T NNN+ + N Y KKL N EQ+
Sbjct: 89 TIHNNNNYKYNYNNNNYNNNCKKLYYNINYIEQI 122
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.4 bits (48), Expect = 2.2
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = +1
Query: 367 TSRNNNSDDFKELQNKYEETSKKLCELSNKYEQL 468
T NNN+ + N Y KKL N EQ+
Sbjct: 89 TIHNNNNYKYNYNNNNYNNNCKKLYYNINYIEQI 122
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.4 bits (48), Expect = 2.2
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = +1
Query: 367 TSRNNNSDDFKELQNKYEETSKKLCELSNKYEQL 468
T NNN+ + N Y KKL N EQ+
Sbjct: 89 TIHNNNNYKYNYNNNNYNNNCKKLYYNINYIEQI 122
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.4 bits (48), Expect = 2.2
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = +1
Query: 367 TSRNNNSDDFKELQNKYEETSKKLCELSNKYEQL 468
T NNN+ + N Y KKL N EQ+
Sbjct: 89 TIHNNNNYKYNYNNNNYNNNCKKLYYNINYIEQI 122
>AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier
protein JHBP-1 protein.
Length = 253
Score = 23.0 bits (47), Expect = 2.9
Identities = 12/18 (66%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
Frame = +1
Query: 376 NNNSDD-FKELQNKYEET 426
N NS+ FKELQ YEET
Sbjct: 211 NENSELLFKELQAAYEET 228
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 23.0 bits (47), Expect = 2.9
Identities = 9/32 (28%), Positives = 18/32 (56%)
Frame = +1
Query: 94 ESNESLKQKNSSLEQQLKTLQKEKDNIHTHYQ 189
E S+K + + ++KT +K + +TH+Q
Sbjct: 661 EFRSSIKASDKLKDSRIKTTEKLSTDPNTHFQ 692
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 22.2 bits (45), Expect = 5.1
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1
Query: 172 IHTHYQHYVI 201
+H HYQHY I
Sbjct: 4 LHIHYQHYHI 13
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 22.2 bits (45), Expect = 5.1
Identities = 8/31 (25%), Positives = 19/31 (61%)
Frame = +1
Query: 439 CELSNKYEQLETLNNENIAKIKDLEKNKDSE 531
C +N+ + ++ NN+N K+ +KN +++
Sbjct: 414 CVNNNQNDNIQNTNNQNDNNQKNNKKNANNQ 444
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.301 0.119 0.296
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,522
Number of Sequences: 438
Number of extensions: 2764
Number of successful extensions: 18
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22413960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 17 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.8 bits)
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