Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt19h08
(693 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 80 3e-16
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 38 0.001
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 37 0.002
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 37 0.002
SPAC823.10c |||mitochondrial carrier with solute carrier repeats... 36 0.004
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 35 0.013
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 35 0.013
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 34 0.017
SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces p... 33 0.030
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 33 0.039
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 32 0.068
SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr 2... 27 2.6
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 27 2.6
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 26 5.9
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 26 5.9
SPAC12B10.09 |||S-adenosylmethionine transporter |Schizosaccharo... 25 7.9
SPAC6G9.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 25 7.9
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 79.8 bits (188), Expect = 3e-16
Identities = 56/162 (34%), Positives = 75/162 (46%), Gaps = 3/162 (1%)
Frame = +1
Query: 211 VTDLLMGGVSAMFATMFTNPIEVVKTRLQLQGEMKARGHHAVFYKNVPHGLFVIARTEGM 390
V+ L GG++A A TNP EV+KTR QLQG++ YK+V +IAR EG+
Sbjct: 24 VSGFLSGGLAACGAVTLTNPFEVIKTRFQLQGQLTKLDPSKRIYKSVGQAFSLIARHEGI 83
Query: 391 AALQSGLPAMLGFQFFLNTFRLGVYRISERRGLTT---DKSGRTSXXXXXXXXXXXXXXX 561
LQ GL +Q LN RLG Y RR L T D
Sbjct: 84 RGLQRGLGTAYVYQICLNGCRLGFYE-PIRRTLNTWFLDDPKGNKLAINVASGAGSGLCG 142
Query: 562 XXXXTPFFLVKTRLQAQAARAIAVGHQHQHAGTAGALADIYR 687
+PFFLVKTR+Q+ + + VG Q+ + A + I +
Sbjct: 143 ALFGSPFFLVKTRMQSYSPK-FPVGQQYGYKHIFNAFSRIIK 183
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 37.9 bits (84), Expect = 0.001
Identities = 24/64 (37%), Positives = 31/64 (48%)
Frame = +1
Query: 217 DLLMGGVSAMFATMFTNPIEVVKTRLQLQGEMKARGHHAVFYKNVPHGLFVIARTEGMAA 396
D +MGGVSA + PIE VK +Q Q EM G + YK + A EG+ +
Sbjct: 30 DFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMIRAGRLSHRYKGIGECFKRTAAEEGVIS 89
Query: 397 LQSG 408
L G
Sbjct: 90 LWRG 93
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 37.1 bits (82), Expect = 0.002
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Frame = +1
Query: 220 LLMGGVSAMFATMFTNPIEVVKTRLQLQGEMKARGHHAVF-YKNVPHGLFVIARTEGMAA 396
LL G V +FA++ P EV+KTRLQLQG + + Y + + IA+ EGM
Sbjct: 114 LLAGFVGDLFASVVYVPSEVLKTRLQLQGRYNNPHFQSNYNYPSFRGAVKQIAKQEGMKT 173
Query: 397 LQSGLPAMLGFQFFLNTFRLGVY 465
G A + + F+L Y
Sbjct: 174 FFYGYRATILRDIPFSGFQLLFY 196
Score = 29.1 bits (62), Expect = 0.64
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Frame = +1
Query: 163 EQFRKMAARQDGVGRDV---TDLLMGGVSAMFATMFTNPIEVVKTRLQ 297
E+ R++A ++ G +D+ +L+ G ++ A T P++V KTRLQ
Sbjct: 197 EKLRQVAQKECGQ-KDIGVFRELITGSLAGAGAGFLTTPLDVAKTRLQ 243
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 37.1 bits (82), Expect = 0.002
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Frame = +1
Query: 199 VGRDVTDLLMGGVSAMFATMFTNPIEVVKTRLQLQGEMKAR--GHHAVFYKNVPHGLFVI 372
V + D + GG + + +++ P++VVKTR Q Q + G + + + I
Sbjct: 2 VDDSLKDAIAGGAAGLASSLVVAPLDVVKTRKQAQKAFYSTGGGKNTMVLGGTLSSMRTI 61
Query: 373 ARTEGMAALQSGL-PAMLGF 429
EG+A L G+ P MLG+
Sbjct: 62 FHNEGIAGLYRGVGPMMLGY 81
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 235 VSAMFATMFTNPIEVVKTRLQLQGEMKA 318
++ + TNPI VVKTRL Q +A
Sbjct: 142 IAGAASVTLTNPIWVVKTRLVTQSHPRA 169
>SPAC823.10c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 36.3 bits (80), Expect = 0.004
Identities = 20/68 (29%), Positives = 34/68 (50%)
Frame = +1
Query: 205 RDVTDLLMGGVSAMFATMFTNPIEVVKTRLQLQGEMKARGHHAVFYKNVPHGLFVIARTE 384
R++ +++ G +S AT TNP +++KTR+QL+ + YKN H ++ E
Sbjct: 209 RNIVNVMSGLISGATATAITNPFDMLKTRVQLEPHI---------YKNFLHSAKLVYANE 259
Query: 385 GMAALQSG 408
G G
Sbjct: 260 GFRGFLDG 267
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 34.7 bits (76), Expect = 0.013
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +1
Query: 199 VGRDVTDLLMGGVSAMFATMFTNPIEVVKTRLQLQGEMKARGHHAVFYKNVPHGLFVIAR 378
+G +L+ G + +F T + P +V+K+R+Q + + Y L +AR
Sbjct: 196 IGEIRNNLIAGTIGGIFGTFLSTPFDVIKSRIQTVPRIAGQ---VPKYNWAYPALVTVAR 252
Query: 379 TEGMAALQSG-LPAML 423
EG AL G +P +L
Sbjct: 253 EEGFTALYKGFVPKVL 268
Score = 28.3 bits (60), Expect = 1.1
Identities = 36/147 (24%), Positives = 54/147 (36%), Gaps = 1/147 (0%)
Frame = +1
Query: 169 FRKMAARQDGVGRDVTDLLMGGVSAMFATMFTNPIEVVKTRLQ-LQGEMKARGHHAVFYK 345
+RK+ R+D +L G + T P E++K RLQ ++ K G F K
Sbjct: 93 WRKVFKRKDS--SPALSILTGSCAGFTETFVVVPFELMKIRLQDVKNASKYNGTVDCFTK 150
Query: 346 NVPHGLFVIARTEGMAALQSGLPAMLGFQFFLNTFRLGVYRISERRGLTTDKSGRTSXXX 525
I + E + AL +G A + N GV + R LT S
Sbjct: 151 --------IVKQERILALYNGFEATMWRHVVWNAGYFGVIQ-KIRNSLTPASSRIGEIRN 201
Query: 526 XXXXXXXXXXXXXXXXTPFFLVKTRLQ 606
TPF ++K+R+Q
Sbjct: 202 NLIAGTIGGIFGTFLSTPFDVIKSRIQ 228
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 34.7 bits (76), Expect = 0.013
Identities = 24/68 (35%), Positives = 33/68 (48%)
Frame = +1
Query: 220 LLMGGVSAMFATMFTNPIEVVKTRLQLQGEMKARGHHAVFYKNVPHGLFVIARTEGMAAL 399
L+ ++ + + TNPI +VKTRLQL K G A Y++ + R EG L
Sbjct: 166 LMAAAIAGVITSAATNPIWLVKTRLQLD---KKSG-QAAQYRSSIDCIIKTIRLEGFRGL 221
Query: 400 QSGLPAML 423
GL A L
Sbjct: 222 YKGLSASL 229
Score = 31.9 bits (69), Expect = 0.090
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 211 VTDLLMGGVSAMFATMFTNPIEVVKTRLQ 297
++ + GGV+ M + T P++VVKTRLQ
Sbjct: 49 LSHFIAGGVAGMLGAIATAPLDVVKTRLQ 77
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 34.3 bits (75), Expect = 0.017
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = +1
Query: 220 LLMGGVSAMFATMFTNPIEVVKTRLQLQGEMKARGHHAVFYKNVPHGLFVIARTEGM 390
L +GG + + T P +V++ R Q+ + GH+ YKN+ +F I +TEG+
Sbjct: 230 LFLGGFTGIIGQTLTFPADVLRRRFQVN-RIPGIGHN---YKNIKSAIFHIYKTEGI 282
Score = 25.4 bits (53), Expect = 7.9
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +1
Query: 199 VGRDVTDLLMGGVSAMFATMFTNPIEVVKTRLQLQ 303
+ D+ +L GGV+A + +P+E +K Q+Q
Sbjct: 17 LSNDLISMLSGGVAATVSRTAVSPLERMKIIFQVQ 51
>SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 335
Score = 33.5 bits (73), Expect = 0.030
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 217 DLLMGGVSAMFATMFTNPIEVVKTRLQLQGEMKARG 324
+ + GG+S AT+ T P +V KT Q+ G RG
Sbjct: 249 NFVSGGISGTLATLLTQPFDVSKTAKQVHGHTLTRG 284
Score = 30.7 bits (66), Expect = 0.21
Identities = 18/67 (26%), Positives = 30/67 (44%)
Frame = +1
Query: 223 LMGGVSAMFATMFTNPIEVVKTRLQLQGEMKARGHHAVFYKNVPHGLFVIARTEGMAALQ 402
+ G + + +PIE+ +TR+Q G GH V GL ++ +G+ L
Sbjct: 141 IAGASARTISATIVSPIELFRTRVQAVGGHYPPGHAREIANEVFDGLKLMIHQKGILNLW 200
Query: 403 SGLPAML 423
SG+ L
Sbjct: 201 SGVSVTL 207
Score = 29.5 bits (63), Expect = 0.48
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 14/95 (14%)
Frame = +1
Query: 205 RDVTDLLMGGVSAMFATMFTNPIEVVKTRLQLQ-------------GEMKARGHHAVFYK 345
+ + +L V ++ T+ P++VVKTRLQ + ++ +G A
Sbjct: 23 KPIAKMLSACVGSVITTLTVTPLDVVKTRLQSESISQYSSTQPISSAKILGKGRPAPKPL 82
Query: 346 NVP-HGLFVIARTEGMAALQSGLPAMLGFQFFLNT 447
P GL+ IAR EG+ +L GL L NT
Sbjct: 83 GGPVSGLYQIARHEGVRSLWRGLVPSLTMLLPANT 117
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 33.1 bits (72), Expect = 0.039
Identities = 21/66 (31%), Positives = 30/66 (45%)
Frame = +1
Query: 211 VTDLLMGGVSAMFATMFTNPIEVVKTRLQLQGEMKARGHHAVFYKNVPHGLFVIARTEGM 390
VT L+G V+ + T PI+ VK+R+Q K YKN H + I +G+
Sbjct: 204 VTTFLVGSVAGIITVYCTQPIDTVKSRMQSLSASKE-------YKNSIHCAYKILTQDGL 256
Query: 391 AALQSG 408
SG
Sbjct: 257 LRFWSG 262
Score = 28.3 bits (60), Expect = 1.1
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +1
Query: 211 VTDLLMGGVSAMFATMFTNPIEVVKTRLQL 300
V ++ GGV+ T P E KTRLQL
Sbjct: 18 VKSIIAGGVAGAIEISITYPAEFAKTRLQL 47
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 32.3 bits (70), Expect = 0.068
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 220 LLMGGVSAMFATMFTNPIEVVKTRLQLQG 306
++ GG+S A+ T P++VVKT LQ +G
Sbjct: 208 IISGGLSGAIASSLTTPLDVVKTLLQTRG 236
Score = 30.7 bits (66), Expect = 0.21
Identities = 19/87 (21%), Positives = 31/87 (35%)
Frame = +1
Query: 205 RDVTDLLMGGVSAMFATMFTNPIEVVKTRLQLQGEMKARGHHAVFYKNVPHGLFVIARTE 384
R + L G + + F P +V+K R+QL YK+ H + R E
Sbjct: 112 RPLASALAGACAITISDAFMTPFDVIKQRMQLPSRK---------YKSALHCATTVFRNE 162
Query: 385 GMAALQSGLPAMLGFQFFLNTFRLGVY 465
G+ A P + ++ Y
Sbjct: 163 GLGAFYISYPTCIAMSIPFTAIQVATY 189
Score = 28.7 bits (61), Expect = 0.84
Identities = 17/68 (25%), Positives = 33/68 (48%)
Frame = +1
Query: 220 LLMGGVSAMFATMFTNPIEVVKTRLQLQGEMKARGHHAVFYKNVPHGLFVIARTEGMAAL 399
LL G S + P++ +KTR+Q+ G N+ + + I+ TEG+ +L
Sbjct: 23 LLAGAFSGILEHSVMYPVDAIKTRMQM-----LNGVSRSVSGNIVNSVIKISSTEGVYSL 77
Query: 400 QSGLPAML 423
G+ +++
Sbjct: 78 WRGISSVI 85
>SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 277
Score = 27.1 bits (57), Expect = 2.6
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +1
Query: 220 LLMGGVSAMFATMFTNPIEVVKTRLQLQGEMKARGHHAVFYKNVPHGLFVIARTEGMAAL 399
L G + TNPI VVK+R+ + R V Y N G + + + EG+
Sbjct: 102 LCSSGFAGCIVAALTNPIWVVKSRI-----LSKR----VNYTNPFFGFYDLIKNEGLRGC 152
Query: 400 QSGL-PAMLG 426
+G P++LG
Sbjct: 153 YAGFAPSLLG 162
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 27.1 bits (57), Expect = 2.6
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 223 LMGGVSAMFATMFTNPIEVVKTRLQLQGEMKARGHH 330
L GG++ A MF P++ +K R+Q +RG H
Sbjct: 233 LAGGMAGSVAQMFIYPVDTLKFRIQCSD--LSRGQH 266
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 25.8 bits (54), Expect = 5.9
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +1
Query: 223 LMGGVSAMFATMFTNPIEVVKTRLQL 300
L GG+S++ P +V+K R+Q+
Sbjct: 21 LAGGISSVICRFMIAPFDVIKIRMQI 46
>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 488
Score = 25.8 bits (54), Expect = 5.9
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -2
Query: 488 SPRRSLIR*TPNRNVFKKNWNPSIAGNP 405
SP+ S IR +P +V +W+ + G+P
Sbjct: 50 SPKSSFIRNSPKIDVVNTDWSIPLCGSP 77
>SPAC12B10.09 |||S-adenosylmethionine transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 345
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = +1
Query: 268 PIEVVKTRLQLQGE-MKARGHHAVF 339
PI+ +KTRLQ +G +K G H V+
Sbjct: 102 PIDTLKTRLQAKGGFVKNGGFHGVY 126
>SPAC6G9.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 681
Score = 25.4 bits (53), Expect = 7.9
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = -2
Query: 455 NRNVFKKN-WNPSIAGNPLCRAAIPS 381
N++V K N W+P A P+ + IPS
Sbjct: 31 NKDVLKSNSWDPYAANAPIALSEIPS 56
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,691,760
Number of Sequences: 5004
Number of extensions: 52391
Number of successful extensions: 145
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 142
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 321951680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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