Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt19h07
(651 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 25 0.48
AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 25 0.48
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 25 0.63
DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protei... 24 1.5
AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength rhodo... 24 1.5
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 22 5.9
AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength rhodo... 22 5.9
AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive... 22 5.9
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 21 7.8
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 21 7.8
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 21 7.8
>AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 25.4 bits (53), Expect = 0.48
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +1
Query: 247 RYGEGIEDYGNFILHYKGETPGLYGVGFLVKKGLAEKI 360
R E ED G ILHY + PGL + + K +A+K+
Sbjct: 121 RCTERPED-GALILHYYSDRPGLEHIVIGIVKTVAKKL 157
>AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 25.4 bits (53), Expect = 0.48
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +1
Query: 247 RYGEGIEDYGNFILHYKGETPGLYGVGFLVKKGLAEKI 360
R E ED G ILHY + PGL + + K +A+K+
Sbjct: 121 RCTERPED-GALILHYYSDRPGLEHIVIGIVKTVAKKL 157
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 25.0 bits (52), Expect = 0.63
Identities = 16/72 (22%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +1
Query: 397 LNIELPVKNAEKWSIIQAYSPTESNKKDDIRKIEKFYE-DLHLTIENSHKN-IIVMGDFN 570
LN+E N E W +I T+ E++ + D+++ +E K+ +I F+
Sbjct: 1081 LNVETAKTNEEMWELIDTEKLTDRLPYPWTMDNERYVKVDMYMNLEGEQKDPVIFSTSFD 1140
Query: 571 GQIGKRNNFGEE 606
++ R + E
Sbjct: 1141 SKVMTRPDTDSE 1152
Score = 24.6 bits (51), Expect = 0.84
Identities = 16/63 (25%), Positives = 28/63 (44%)
Frame = +1
Query: 241 MRRYGEGIEDYGNFILHYKGETPGLYGVGFLVKKGLAEKIGEIKGVSERIAVLNIELPVK 420
MR G GIE ++++ + PG ++ +E E KG + +E+P
Sbjct: 1178 MREAGRGIESAKSYVVDVRVHVPGESESETVLTLAWSESNVESKG--RLLGFWRVEMPRS 1235
Query: 421 NAE 429
NA+
Sbjct: 1236 NAD 1238
>DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protein
protein.
Length = 424
Score = 23.8 bits (49), Expect = 1.5
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +2
Query: 35 HFTAIIFHLSQADWSSWGRMTNTL*WKRRDF 127
+F+AI+F L+ +D + ++ N WK +F
Sbjct: 5 YFSAILFLLAISDSQAQEKLKNIYSWKALEF 35
>AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength
rhodopsin protein.
Length = 152
Score = 23.8 bits (49), Expect = 1.5
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1
Query: 151 NARSLRTPEKLQELELALSD 210
+ +SLRTP L + LA+SD
Sbjct: 45 STKSLRTPSNLFVINLAISD 64
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 21.8 bits (44), Expect = 5.9
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +1
Query: 151 NARSLRTPEKLQELELALSD 210
+ +SLRTP L + LA+S+
Sbjct: 79 STKSLRTPSNLFVINLAISN 98
Score = 21.8 bits (44), Expect = 5.9
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +1
Query: 433 WSIIQAYSPTESNKKDDIRKI 495
W IIQA + E N ++ +K+
Sbjct: 237 WFIIQAVAAHEKNMREQAKKM 257
>AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength
rhodopsin protein.
Length = 154
Score = 21.8 bits (44), Expect = 5.9
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +1
Query: 433 WSIIQAYSPTESNKKDDIRKI 495
W IIQA + E N ++ +K+
Sbjct: 113 WFIIQAVAAHEKNMREQAKKM 133
>AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive
opsin protein.
Length = 371
Score = 21.8 bits (44), Expect = 5.9
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 154 ARSLRTPEKLQELELALSD 210
A+SLRTP + + LA+ D
Sbjct: 76 AKSLRTPSNMFVVNLAICD 94
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 21.4 bits (43), Expect = 7.8
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +1
Query: 154 ARSLRTPEKLQELELALSDI 213
++SLRTP + + LA+ DI
Sbjct: 85 SKSLRTPSNMFIVSLAIFDI 104
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 21.4 bits (43), Expect = 7.8
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +1
Query: 160 SLRTPEKLQELELALSDIKWDIIGI 234
S++TP LA+SD+ + I+G+
Sbjct: 63 SMQTPTNYYLFNLAVSDLLFLILGL 87
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 21.4 bits (43), Expect = 7.8
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +1
Query: 154 ARSLRTPEKLQELELALSDI 213
++SLRTP + + LA+ DI
Sbjct: 85 SKSLRTPSNMFIVSLAIFDI 104
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,199
Number of Sequences: 438
Number of extensions: 3319
Number of successful extensions: 21
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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