Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt19f05
(356 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF560717-1|ABQ59027.1| 983|Homo sapiens PHC3 protein protein. 32 0.60
BC131772-1|AAI31773.1| 983|Homo sapiens PHC3 protein protein. 32 0.60
AJ320486-1|CAC86587.2| 983|Homo sapiens homolog of polyhomeotic... 32 0.60
AF444193-1|AAM51781.1| 983|Homo sapiens polyhomeotic 3 protein ... 32 0.60
AF326592-1|AAL37371.1| 1171|Homo sapiens homeodomain interacting... 31 1.4
AF208291-1|AAG41236.1| 1198|Homo sapiens protein kinase HIPK2 pr... 31 1.4
AF207702-1|AAG35710.1| 911|Homo sapiens homeodomain-interacting... 31 1.4
AC005531-1|AAS00368.1| 292|Homo sapiens unknown protein. 31 1.4
Y11192-1|CAA72076.1| 535|Homo sapiens succinic semialdehyde deh... 29 5.6
L34820-1|AAA67057.1| 323|Homo sapiens succinate semialdehyde de... 29 5.6
BC034321-1|AAH34321.1| 535|Homo sapiens aldehyde dehydrogenase ... 29 5.6
AL031230-4|CAA20248.1| 535|Homo sapiens aldehyde dehydrogenase ... 29 5.6
AJ427355-1|CAD20884.1| 535|Homo sapiens succinic semialdehyde d... 29 5.6
AJ427354-1|CAD20883.2| 480|Homo sapiens succinic semialdehyde d... 29 5.6
>EF560717-1|ABQ59027.1| 983|Homo sapiens PHC3 protein protein.
Length = 983
Score = 31.9 bits (69), Expect = 0.60
Identities = 21/79 (26%), Positives = 40/79 (50%)
Frame = -1
Query: 254 SGRPETSPSCPTALRSPEAFTIVSSSKASLNSRL*MKNRTSFSYLAGWKNHCSLVLSALL 75
SGRP TSP+ +S + T ++ S + ++L +++ S S +G +++L +
Sbjct: 105 SGRPSTSPTGSVTQQSSMSQTSINLSTSPTPAQLISRSQAS-SSTSGSITQQTMLLGSTS 163
Query: 74 PPYTTRSRALQLQVDVLIF 18
P T + L+ +LIF
Sbjct: 164 PTLTASQAQMYLRAQMLIF 182
>BC131772-1|AAI31773.1| 983|Homo sapiens PHC3 protein protein.
Length = 983
Score = 31.9 bits (69), Expect = 0.60
Identities = 21/79 (26%), Positives = 40/79 (50%)
Frame = -1
Query: 254 SGRPETSPSCPTALRSPEAFTIVSSSKASLNSRL*MKNRTSFSYLAGWKNHCSLVLSALL 75
SGRP TSP+ +S + T ++ S + ++L +++ S S +G +++L +
Sbjct: 105 SGRPSTSPTGSVTQQSSMSQTSINLSTSPTPAQLISRSQAS-SSTSGSITQQTMLLGSTS 163
Query: 74 PPYTTRSRALQLQVDVLIF 18
P T + L+ +LIF
Sbjct: 164 PTLTASQAQMYLRAQMLIF 182
>AJ320486-1|CAC86587.2| 983|Homo sapiens homolog of polyhomeotic 3
protein.
Length = 983
Score = 31.9 bits (69), Expect = 0.60
Identities = 21/79 (26%), Positives = 40/79 (50%)
Frame = -1
Query: 254 SGRPETSPSCPTALRSPEAFTIVSSSKASLNSRL*MKNRTSFSYLAGWKNHCSLVLSALL 75
SGRP TSP+ +S + T ++ S + ++L +++ S S +G +++L +
Sbjct: 105 SGRPSTSPTGSVTQQSSMSQTSINLSTSPTPAQLISRSQAS-SSTSGSITQQTMLLGSTS 163
Query: 74 PPYTTRSRALQLQVDVLIF 18
P T + L+ +LIF
Sbjct: 164 PTLTASQAQMYLRAQMLIF 182
>AF444193-1|AAM51781.1| 983|Homo sapiens polyhomeotic 3 protein
protein.
Length = 983
Score = 31.9 bits (69), Expect = 0.60
Identities = 21/79 (26%), Positives = 40/79 (50%)
Frame = -1
Query: 254 SGRPETSPSCPTALRSPEAFTIVSSSKASLNSRL*MKNRTSFSYLAGWKNHCSLVLSALL 75
SGRP TSP+ +S + T ++ S + ++L +++ S S +G +++L +
Sbjct: 105 SGRPSTSPTGSVTQQSSMSQTSINLSTSPTPAQLISRSQAS-SSTSGSITQQTMLLGSTS 163
Query: 74 PPYTTRSRALQLQVDVLIF 18
P T + L+ +LIF
Sbjct: 164 PTLTASQAQMYLRAQMLIF 182
>AF326592-1|AAL37371.1| 1171|Homo sapiens homeodomain interacting
protein kinase 2 protein.
Length = 1171
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = -1
Query: 230 SCPTALRSPEAFTIVSSSKASLNSRL*MKNRTSFSYLAGWKNHCS-LVLSALLPPYTTRS 54
SC T SP + + ++S S+ R N +F +NHC+ + ++PP T++
Sbjct: 890 SCVTVHDSPYSDSSSNTSPYSVQQRAGHNNANAFDTKGSLENHCTGNPRTIIVPPLKTQA 949
Query: 53 RALQLQVDVLI 21
+ ++ D L+
Sbjct: 950 SEVLVECDSLV 960
>AF208291-1|AAG41236.1| 1198|Homo sapiens protein kinase HIPK2
protein.
Length = 1198
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = -1
Query: 230 SCPTALRSPEAFTIVSSSKASLNSRL*MKNRTSFSYLAGWKNHCS-LVLSALLPPYTTRS 54
SC T SP + + ++S S+ R N +F +NHC+ + ++PP T++
Sbjct: 917 SCVTVHDSPYSDSSSNTSPYSVQQRAGHNNANAFDTKGSLENHCTGNPRTIIVPPLKTQA 976
Query: 53 RALQLQVDVLI 21
+ ++ D L+
Sbjct: 977 SEVLVECDSLV 987
>AF207702-1|AAG35710.1| 911|Homo sapiens homeodomain-interacting
protein kinase 2 protein.
Length = 911
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = -1
Query: 230 SCPTALRSPEAFTIVSSSKASLNSRL*MKNRTSFSYLAGWKNHCS-LVLSALLPPYTTRS 54
SC T SP + + ++S S+ R N +F +NHC+ + ++PP T++
Sbjct: 810 SCVTVHDSPYSDSSSNTSPYSVQQRAGHNNANAFDTKGSLENHCTGNPRTIIVPPLKTQA 869
Query: 53 RALQLQVDVLI 21
+ ++ D L+
Sbjct: 870 SEVLVECDSLV 880
>AC005531-1|AAS00368.1| 292|Homo sapiens unknown protein.
Length = 292
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = -1
Query: 230 SCPTALRSPEAFTIVSSSKASLNSRL*MKNRTSFSYLAGWKNHCS-LVLSALLPPYTTRS 54
SC T SP + + ++S S+ R N +F +NHC+ + ++PP T++
Sbjct: 11 SCVTVHDSPYSDSSSNTSPYSVQQRAGHNNANAFDTKGSLENHCTGNPRTIIVPPLKTQA 70
Query: 53 RALQLQVDVLI 21
+ ++ D L+
Sbjct: 71 SEVLVECDSLV 81
>Y11192-1|CAA72076.1| 535|Homo sapiens succinic semialdehyde
dehydrogenase precursor protein.
Length = 535
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -3
Query: 255 FRKTGDFTVVSNGLAVSRGVHD 190
FR TG V SN V RG+HD
Sbjct: 333 FRNTGQTCVCSNQFLVQRGIHD 354
>L34820-1|AAA67057.1| 323|Homo sapiens succinate semialdehyde
dehydrogenase protein.
Length = 323
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -3
Query: 255 FRKTGDFTVVSNGLAVSRGVHD 190
FR TG V SN V RG+HD
Sbjct: 121 FRNTGQTCVCSNQFLVQRGIHD 142
>BC034321-1|AAH34321.1| 535|Homo sapiens aldehyde dehydrogenase 5
family, member A1 (succinate-semialdehyde dehydrogenas
protein.
Length = 535
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -3
Query: 255 FRKTGDFTVVSNGLAVSRGVHD 190
FR TG V SN V RG+HD
Sbjct: 333 FRNTGQTCVCSNQFLVQRGIHD 354
>AL031230-4|CAA20248.1| 535|Homo sapiens aldehyde dehydrogenase 5
family, member A1 (succinate-semialdehyde dehydrogenas
protein.
Length = 535
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -3
Query: 255 FRKTGDFTVVSNGLAVSRGVHD 190
FR TG V SN V RG+HD
Sbjct: 333 FRNTGQTCVCSNQFLVQRGIHD 354
>AJ427355-1|CAD20884.1| 535|Homo sapiens succinic semialdehyde
dehydrogenase precursor protein.
Length = 535
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -3
Query: 255 FRKTGDFTVVSNGLAVSRGVHD 190
FR TG V SN V RG+HD
Sbjct: 333 FRNTGQTCVCSNQFLVQRGIHD 354
>AJ427354-1|CAD20883.2| 480|Homo sapiens succinic semialdehyde
dehydrogenase protein.
Length = 480
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -3
Query: 255 FRKTGDFTVVSNGLAVSRGVHD 190
FR TG V SN V RG+HD
Sbjct: 278 FRNTGQTCVCSNQFLVQRGIHD 299
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,693,960
Number of Sequences: 237096
Number of extensions: 797739
Number of successful extensions: 1666
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1666
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2133208582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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