Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt19f05
         (356 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021252-1|AAX33400.1|  553|Drosophila melanogaster RE60459p pro...    29   1.3  
AE014297-2215|AAN13711.1|  698|Drosophila melanogaster CG14897-P...    29   1.3  
AE014297-2214|AAF55320.1| 1298|Drosophila melanogaster CG14897-P...    29   1.3  
BT016143-1|AAV37028.1| 1240|Drosophila melanogaster AT25839p pro...    27   5.3  
AY051540-1|AAK92964.1|  777|Drosophila melanogaster GH19061p pro...    27   5.3  
AE013599-727|AAF59033.1| 1240|Drosophila melanogaster CG8266-PA,...    27   5.3  
AE013599-726|AAM71085.1| 1241|Drosophila melanogaster CG8266-PB,...    27   5.3  
BT022214-1|AAY54630.1|  446|Drosophila melanogaster IP12388p pro...    27   7.0  

>BT021252-1|AAX33400.1|  553|Drosophila melanogaster RE60459p
           protein.
          Length = 553

 Score = 29.5 bits (63), Expect = 1.3
 Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = +1

Query: 148 IYNREFNDALEL-DTIVNASGDRKAVGHDGEVSGLPEIYSW 267
           IYN+   D + L D  ++A+G R  + H G+++   ++Y+W
Sbjct: 61  IYNKSSGDPIHLNDVAIHAAGKRPLL-HGGKITIRDKVYTW 100


>AE014297-2215|AAN13711.1|  698|Drosophila melanogaster CG14897-PA,
           isoform A protein.
          Length = 698

 Score = 29.5 bits (63), Expect = 1.3
 Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = +1

Query: 148 IYNREFNDALEL-DTIVNASGDRKAVGHDGEVSGLPEIYSW 267
           IYN+   D + L D  ++A+G R  + H G+++   ++Y+W
Sbjct: 61  IYNKSSGDPIHLNDVAIHAAGKRPLL-HGGKITIRDKVYTW 100


>AE014297-2214|AAF55320.1| 1298|Drosophila melanogaster CG14897-PB,
           isoform B protein.
          Length = 1298

 Score = 29.5 bits (63), Expect = 1.3
 Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = +1

Query: 148 IYNREFNDALEL-DTIVNASGDRKAVGHDGEVSGLPEIYSW 267
           IYN+   D + L D  ++A+G R  + H G+++   ++Y+W
Sbjct: 61  IYNKSSGDPIHLNDVAIHAAGKRPLL-HGGKITIRDKVYTW 100


>BT016143-1|AAV37028.1| 1240|Drosophila melanogaster AT25839p
           protein.
          Length = 1240

 Score = 27.5 bits (58), Expect = 5.3
 Identities = 21/51 (41%), Positives = 26/51 (50%)
 Frame = -1

Query: 227 CPTALRSPEAFTIVSSSKASLNSRL*MKNRTSFSYLAGWKNHCSLVLSALL 75
           C  A R PEA  I S+  A + +     NRT   YL   KN  S V+SAL+
Sbjct: 561 CLEAQRIPEALIIAST--AGIETL----NRTQTRYLLQQKNELSHVISALV 605


>AY051540-1|AAK92964.1|  777|Drosophila melanogaster GH19061p
           protein.
          Length = 777

 Score = 27.5 bits (58), Expect = 5.3
 Identities = 21/51 (41%), Positives = 26/51 (50%)
 Frame = -1

Query: 227 CPTALRSPEAFTIVSSSKASLNSRL*MKNRTSFSYLAGWKNHCSLVLSALL 75
           C  A R PEA  I S+  A + +     NRT   YL   KN  S V+SAL+
Sbjct: 98  CLEAQRIPEALIIAST--AGIETL----NRTQTRYLLQQKNELSHVISALV 142


>AE013599-727|AAF59033.1| 1240|Drosophila melanogaster CG8266-PA,
           isoform A protein.
          Length = 1240

 Score = 27.5 bits (58), Expect = 5.3
 Identities = 21/51 (41%), Positives = 26/51 (50%)
 Frame = -1

Query: 227 CPTALRSPEAFTIVSSSKASLNSRL*MKNRTSFSYLAGWKNHCSLVLSALL 75
           C  A R PEA  I S+  A + +     NRT   YL   KN  S V+SAL+
Sbjct: 561 CLEAQRIPEALIIAST--AGIETL----NRTQTRYLLQQKNELSHVISALV 605


>AE013599-726|AAM71085.1| 1241|Drosophila melanogaster CG8266-PB,
           isoform B protein.
          Length = 1241

 Score = 27.5 bits (58), Expect = 5.3
 Identities = 21/51 (41%), Positives = 26/51 (50%)
 Frame = -1

Query: 227 CPTALRSPEAFTIVSSSKASLNSRL*MKNRTSFSYLAGWKNHCSLVLSALL 75
           C  A R PEA  I S+  A + +     NRT   YL   KN  S V+SAL+
Sbjct: 562 CLEAQRIPEALIIAST--AGIETL----NRTQTRYLLQQKNELSHVISALV 606


>BT022214-1|AAY54630.1|  446|Drosophila melanogaster IP12388p
           protein.
          Length = 446

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 15/32 (46%), Positives = 16/32 (50%)
 Frame = -3

Query: 288 RLERCNEPRVDFRKTGDFTVVSNGLAVSRGVH 193
           RL   N  R D R+T DF VVSNG       H
Sbjct: 33  RLTVTNRIRSDKRETLDFNVVSNGECTVNTTH 64


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,849,111
Number of Sequences: 53049
Number of extensions: 248263
Number of successful extensions: 922
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 922
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 880179048
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)