Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt19e24
(731 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0627 + 4685077-4685155,4685978-4686336,4686761-4686862,468... 212 3e-55
07_01_0450 - 3395644-3395837,3396164-3396190,3396266-3396396,339... 42 7e-04
08_01_0382 - 3402015-3403604 39 0.005
02_02_0197 + 7689403-7691070 37 0.019
08_02_0301 - 15503184-15504773,15504790-15504873 31 0.71
11_04_0446 - 17825324-17825420,17825720-17825800,17826106-178262... 30 2.2
08_01_0106 - 762287-763393,763752-764414 29 2.9
06_03_0403 - 20435349-20435358,20435750-20436204,20436744-20438315 29 2.9
06_03_0400 - 20420257-20421837 29 2.9
11_04_0383 - 17004520-17005150,17005205-17005327,17005641-17007142 29 3.8
06_03_0408 - 20485027-20486598 29 3.8
03_05_0192 + 21809251-21809413,21809553-21809720,21809858-21810120 29 3.8
02_04_0157 + 20388761-20388763,20389807-20389935,20390206-203903... 29 3.8
01_01_0431 + 3271839-3273192,3273481-3275148,3275346-3275416 29 3.8
08_01_0383 - 3405986-3407359,3409283-3410827 29 5.0
08_02_1271 - 25762750-25764276 28 6.6
01_05_0607 + 23619271-23619426,23619479-23619552,23619917-236205... 28 6.6
10_01_0162 + 1820761-1821855 28 8.8
05_03_0410 + 13616708-13617691 28 8.8
04_04_0897 - 29186821-29187459 28 8.8
>07_01_0627 +
4685077-4685155,4685978-4686336,4686761-4686862,
4687528-4687598,4687871-4687989,4688327-4688422,
4688527-4688636,4688734-4688814,4689124-4689224,
4689663-4689771,4689971-4690076,4690140-4690225,
4690324-4690449,4690816-4690902
Length = 543
Score = 212 bits (517), Expect = 3e-55
Identities = 104/192 (54%), Positives = 135/192 (70%), Gaps = 1/192 (0%)
Frame = +3
Query: 159 SSEKYNVKRKQ-FGTVQESDINYFKSILSEERVLTDENDVLPFNIDWIKNCRGQSKVVLK 335
SS +V+R + + D++YFKSIL + V+ DE+ V N+DW+ +G S+++L
Sbjct: 81 SSAAAHVQRNPAYSVLNSDDVSYFKSILGDSGVVQDEDRVSVANMDWMGKYKGSSQLLLL 140
Query: 336 PRSTEEVSKIVKYCNDKHLAVCPQGGNTGLVGGSVPVFDEVVLCLGLLNKIISLDEISGV 515
P+ST EVSKI+ YCN + LAV PQGGNTGLVGGSVPV+DEV +G+
Sbjct: 141 PKSTAEVSKILSYCNSRRLAVVPQGGNTGLVGGSVPVYDEV----------------NGI 184
Query: 516 LICEAGCILESLDTCVRERNLIMPLDLGAKGTCQIGGNASTNAGGLRLLRYGNLHGSILG 695
L CEAGC+LE+L + V + IMPLDLGAKG+C IGGN STNAGGLR +RYG+LHGS+LG
Sbjct: 185 LTCEAGCVLENLSSYVENKGFIMPLDLGAKGSCHIGGNISTNAGGLRFIRYGSLHGSVLG 244
Query: 696 IEAVKADGTVID 731
+E V ADGTV+D
Sbjct: 245 LEVVLADGTVLD 256
>07_01_0450 -
3395644-3395837,3396164-3396190,3396266-3396396,
3396612-3396691,3397283-3397345,3397588-3397697,
3398316-3398424,3398783-3398857,3399363-3399459,
3399622-3399683,3399966-3400026,3400330-3400469,
3400747-3400839,3401345-3401393,3401534-3401634,
3401723-3401816,3401904-3402139
Length = 573
Score = 41.5 bits (93), Expect = 7e-04
Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 7/99 (7%)
Frame = +3
Query: 324 VVLKPRSTEEVSKIVKYCNDKHLAVCPQGGNTGLVGGSVPVFDEVVLCLGLL-------N 482
VV+ PRS +EV KIV CN + + P GG T + G ++ V + + L+
Sbjct: 139 VVVFPRSQDEVQKIVMACNKYKVPIVPYGGATSIEGHTLAPHGGVCINMSLMKFALNRSQ 198
Query: 483 KIISLDEISGVLICEAGCILESLDTCVRERNLIMPLDLG 599
KI SL ++ E G L+ ++ L PLD G
Sbjct: 199 KIKSLHVEDMDVVVEPGVGWIELNEYLKPYGLFFPLDPG 237
>08_01_0382 - 3402015-3403604
Length = 529
Score = 38.7 bits (86), Expect = 0.005
Identities = 34/138 (24%), Positives = 59/138 (42%), Gaps = 3/138 (2%)
Frame = +3
Query: 327 VLKPRSTEEVSKIVKYCNDKHLAVCPQGGNTGLVGGSVPVFDEV---VLCLGLLNKIISL 497
++ P S E++ + + + LA+ + G G S + V V+ L LN++ +
Sbjct: 77 IVLPWSKEDLRRAILCARNSSLAIRVRSGGHSYEGLSYTTENHVPFVVIDLMNLNRV-QV 135
Query: 498 DEISGVLICEAGCILESLDTCVRERNLIMPLDLGAKGTCQIGGNASTNAGGLRLLRYGNL 677
D +S EAG L L V + + G+ T +GG S GL ++G
Sbjct: 136 DSVSATAWAEAGATLGELYYAVGRSSQSLAFSGGSCSTIGLGGVISGGGFGLLSRKFGLA 195
Query: 678 HGSILGIEAVKADGTVID 731
++L V +G V+D
Sbjct: 196 ADNVLDAVLVDPNGRVLD 213
>02_02_0197 + 7689403-7691070
Length = 555
Score = 36.7 bits (81), Expect = 0.019
Identities = 39/143 (27%), Positives = 60/143 (41%), Gaps = 7/143 (4%)
Frame = +3
Query: 324 VVLKPRSTEEVSKIVKYCNDKHLAVCPQGGNTGLVG------GSVPVFDEVVLCLGLLNK 485
+VL P + +EV V C L V + G G G P F V+ + L +
Sbjct: 92 LVLTPVTADEVRACVVCCRAHGLTVRARSGGHDYEGLSYRSLGRSPRF--AVVDVAAL-R 148
Query: 486 IISLDEISGVLICEAGCILESLDTCVRERNL-IMPLDLGAKGTCQIGGNASTNAGGLRLL 662
+ +D GV EAG L L V E + + G T +GG+ S G +
Sbjct: 149 AVRVDAARGVARAEAGATLGELYYAVAEGSGGRLGFPAGICPTVCVGGHLSGGGFGPMMR 208
Query: 663 RYGNLHGSILGIEAVKADGTVID 731
+YG +++ E V A+G ++D
Sbjct: 209 KYGLAADNVVDAEVVDAEGRLLD 231
>08_02_0301 - 15503184-15504773,15504790-15504873
Length = 557
Score = 31.5 bits (68), Expect = 0.71
Identities = 24/92 (26%), Positives = 40/92 (43%)
Frame = +3
Query: 456 VVLCLGLLNKIISLDEISGVLICEAGCILESLDTCVRERNLIMPLDLGAKGTCQIGGNAS 635
VV+ L +N++ +D S E+G L + V + + G+ T GG+ S
Sbjct: 138 VVIDLTRMNRV-RVDAASATAWVESGATLGEIYYAVASSSSSLAFPAGSCSTVGAGGHIS 196
Query: 636 TNAGGLRLLRYGNLHGSILGIEAVKADGTVID 731
GL ++ ++L V ADG V+D
Sbjct: 197 GGGFGLLSRKFKLAADNVLDAILVDADGRVLD 228
>11_04_0446 -
17825324-17825420,17825720-17825800,17826106-17826249,
17826387-17826458,17827042-17827174,17827276-17827354
Length = 201
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +3
Query: 573 NLIMPLDLGAKGTCQIGGNASTNAGGLRLLRYGNLHGSIL 692
N ++ +DLG+ G + G+ GGL L+Y NLHG+ L
Sbjct: 66 NSVIRVDLGSAG---LSGSLIPQLGGLSNLQYLNLHGNNL 102
>08_01_0106 - 762287-763393,763752-764414
Length = 589
Score = 29.5 bits (63), Expect = 2.9
Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Frame = +3
Query: 450 DEVVLCLGLLNKIISLDEISGVLICEAGCILESLDTCVRERNLIMPLDLGAKGTCQIGGN 629
D ++ LN+ +++D + + E+G +L L L +P G +GG
Sbjct: 99 DGTIISTRFLNRTVAVDAAARRITVESGVVLRDLIRAAAAAGLALPHSPYWYG-LTVGGL 157
Query: 630 ASTNAGGLRLLRYGN-LHGSILGIEAV 707
+T A G L G+ +H ++G+ V
Sbjct: 158 LATGAHGSSLWGKGSAVHEYVVGLRIV 184
>06_03_0403 - 20435349-20435358,20435750-20436204,20436744-20438315
Length = 678
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/69 (27%), Positives = 31/69 (44%)
Frame = +3
Query: 525 EAGCILESLDTCVRERNLIMPLDLGAKGTCQIGGNASTNAGGLRLLRYGNLHGSILGIEA 704
E+G L L V + N + G T +GG+ S + +YG +IL +
Sbjct: 149 ESGASLGELYYTVAKSNPGLAFPAGVCPTIGVGGHLSGGGISMMSRKYGLAADNILDAKL 208
Query: 705 VKADGTVID 731
V A+G ++D
Sbjct: 209 VNANGELVD 217
>06_03_0400 - 20420257-20421837
Length = 526
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/69 (24%), Positives = 33/69 (47%)
Frame = +3
Query: 525 EAGCILESLDTCVRERNLIMPLDLGAKGTCQIGGNASTNAGGLRLLRYGNLHGSILGIEA 704
E+G + L + + + + G T +GG+ S G+ L ++G ++L ++
Sbjct: 150 ESGAQIGELYYGISKASPTLAFPAGVCPTIGVGGHFSGGGFGMLLRKFGLASDNVLDVKV 209
Query: 705 VKADGTVID 731
V A+G V D
Sbjct: 210 VDANGKVQD 218
>11_04_0383 - 17004520-17005150,17005205-17005327,17005641-17007142
Length = 751
Score = 29.1 bits (62), Expect = 3.8
Identities = 20/69 (28%), Positives = 30/69 (43%)
Frame = +3
Query: 525 EAGCILESLDTCVRERNLIMPLDLGAKGTCQIGGNASTNAGGLRLLRYGNLHGSILGIEA 704
++G L L V N GA T +GG S GL + ++G ++L
Sbjct: 153 DSGATLGELYYAVGTANPGFAFPGGACSTVGVGGYLSGGGIGLMMRKFGIGADNVLDAMI 212
Query: 705 VKADGTVID 731
V ADG ++D
Sbjct: 213 VNADGELLD 221
>06_03_0408 - 20485027-20486598
Length = 523
Score = 29.1 bits (62), Expect = 3.8
Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 1/94 (1%)
Frame = +3
Query: 453 EVVLCLGLLN-KIISLDEISGVLICEAGCILESLDTCVRERNLIMPLDLGAKGTCQIGGN 629
E L L+N + + +D S ++G L + + + + G T +GG+
Sbjct: 120 ETFAVLDLVNIRAVRVDAASATAWVDSGATLGEMYYAIGKAGGRIAFPAGLCPTVGVGGH 179
Query: 630 ASTNAGGLRLLRYGNLHGSILGIEAVKADGTVID 731
S G+ L +YG +++ V A G ++D
Sbjct: 180 FSGGGFGMLLRKYGLAADNVVDAVLVDAKGRLLD 213
>03_05_0192 + 21809251-21809413,21809553-21809720,21809858-21810120
Length = 197
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -3
Query: 441 ALSLPPVQCSRLADIPPNVCHYNT*QFSKPPLCFW 337
AL L V+ RL PP+ CH S PP C+W
Sbjct: 83 ALPLSLVRSCRLTPSPPDTCHAPDLILSGPP-CWW 116
>02_04_0157 +
20388761-20388763,20389807-20389935,20390206-20390349,
20390690-20390835,20390915-20391071,20391312-20391370,
20391466-20391664,20392232-20392381,20392471-20392607,
20392717-20392863,20392975-20393076,20395655-20395712,
20395816-20395917,20396236-20396273,20396409-20396535,
20397092-20397259,20397356-20397487,20400222-20400331,
20400400-20400460,20400929-20401106,20401194-20401399,
20401552-20401671,20402523-20402621,20404177-20404386,
20404704-20404843,20404945-20405053,20405351-20405431,
20405523-20405693,20405825-20405974,20407029-20407202,
20407453-20407479,20407688-20407758,20407843-20407942,
20408305-20408361,20409457-20409513,20409656-20409736,
20410336-20410421,20410535-20410649
Length = 1466
Score = 29.1 bits (62), Expect = 3.8
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = -1
Query: 548 AFKDASRFTNENTRYFIQTYYFVQKTKTKNDFIEDRH*ASHQSSVPALRTY--RQMFVIT 375
AF +A N N+ Y FV + F+E + S + S A+RTY + V
Sbjct: 200 AFGNAKTVRNNNSSYMSSHISFVSQCSRFGKFVEIQFDQSGKISGAAIRTYLLERSRVCQ 259
Query: 374 ILDNFRNLLC 345
I D RN C
Sbjct: 260 ISDPERNYHC 269
>01_01_0431 + 3271839-3273192,3273481-3275148,3275346-3275416
Length = 1030
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -1
Query: 293 VDIKWQNIIFVS*HSFFAEYRFKVIYIRLLNRSKLFPLNVV 171
+D+ W N + V F R +V+ + L NRS P +VV
Sbjct: 296 IDLYWNNKLCVQLPEFLPGSRLEVLDLILTNRSNAIPASVV 336
>08_01_0383 - 3405986-3407359,3409283-3410827
Length = 972
Score = 28.7 bits (61), Expect = 5.0
Identities = 21/92 (22%), Positives = 41/92 (44%)
Frame = +3
Query: 456 VVLCLGLLNKIISLDEISGVLICEAGCILESLDTCVRERNLIMPLDLGAKGTCQIGGNAS 635
VV+ L LN++ +D +SG ++G L L + + N + G+ T +GG S
Sbjct: 566 VVIDLMNLNRV-HVDSVSGTAWVKSGATLGELYYAIGQLNRSLAFSAGSCSTVGMGGFVS 624
Query: 636 TNAGGLRLLRYGNLHGSILGIEAVKADGTVID 731
GL ++ ++L + +G ++
Sbjct: 625 GGGFGLISRKFALAADNVLDAILMDPNGNALN 656
Score = 28.3 bits (60), Expect = 6.6
Identities = 18/81 (22%), Positives = 33/81 (40%)
Frame = +3
Query: 489 ISLDEISGVLICEAGCILESLDTCVRERNLIMPLDLGAKGTCQIGGNASTNAGGLRLLRY 668
+ +D S E+G L + V + + G+ T GG+ + G +Y
Sbjct: 133 VRVDAASRTAWVESGATLGQVYQAVAAASPALAFSAGSCPTVGSGGHIAGGGFGFLSRKY 192
Query: 669 GNLHGSILGIEAVKADGTVID 731
G +++ + ADG V+D
Sbjct: 193 GLAGDNVIDAVLIAADGRVLD 213
>08_02_1271 - 25762750-25764276
Length = 508
Score = 28.3 bits (60), Expect = 6.6
Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 5/96 (5%)
Frame = +3
Query: 435 SVPVFDEVVLCLGLLNKIISLDEISGVLICEAGCILESLDTCVRERNLIMP-----LDLG 599
S P D +V+ LN+++ ++ + E+G L L L +P LDL
Sbjct: 99 SCPGGDGLVISTNALNRVVGVNAARMEITVESGVTLSELIDAAAHAGLALPHAPYWLDLT 158
Query: 600 AKGTCQIGGNASTNAGGLRLLRYGNLHGSILGIEAV 707
G G + S+ +G + G +H + G+ V
Sbjct: 159 VGGLLSTGAHGSSVSG-----KGGAVHEYVTGMRVV 189
>01_05_0607 +
23619271-23619426,23619479-23619552,23619917-23620594,
23620711-23620815,23620877-23621003,23621613-23621773,
23621858-23622028,23622195-23622324,23622532-23622747,
23626821-23627348
Length = 781
Score = 28.3 bits (60), Expect = 6.6
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Frame = +3
Query: 150 PQLSSEKYNVKRKQFGTVQESDINYFKSIL--SEERVLTDENDVLPFNID-WIKNCRGQS 320
P +S YN+++KQ V + D+ Y K+ L S R+L E + N+D W+ R Q
Sbjct: 358 PSMSQVNYNLRKKQNVQVWQLDMVYSKTSLGFSRCRMLVYEY-INNGNLDQWLHGARSQH 416
Query: 321 KVVLKPRSTEEVSKIVKYCNDKHLAVCPQ 407
V+ + + I K H + P+
Sbjct: 417 GVLTWEARMKIILDIAKALAYLHEGIEPK 445
>10_01_0162 + 1820761-1821855
Length = 364
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -3
Query: 630 HYHQFDKYLLPLSPVALLDCAHGHMYLSFQGCI 532
H H+ D + VAL CAHG ++ F C+
Sbjct: 77 HRHRQDAAAAAAATVALRVCAHGRRHVVFYVCV 109
>05_03_0410 + 13616708-13617691
Length = 327
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/48 (29%), Positives = 18/48 (37%)
Frame = -2
Query: 472 PRQRTTSSKTGTEPPTSPVFPPCGHTAKCLSLQYLTIFETSSVLLGFK 329
P Q +S+ PP P++PP G L T LL K
Sbjct: 160 PTQEMQASRLAGYPPHVPIYPPIGQMGTQHKLSPFTFMMQGESLLNMK 207
>04_04_0897 - 29186821-29187459
Length = 212
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 471 QDKERLHRRPALSLPPVQCSRLAD 400
QD R HR PA +LPP Q R A+
Sbjct: 55 QDHAREHRAPAQALPPQQQHRRAE 78
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,447,749
Number of Sequences: 37544
Number of extensions: 430620
Number of successful extensions: 1274
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1232
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1271
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1921741964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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