Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt19e17
         (617 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        22   4.2  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     22   5.5  
DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    21   7.3  
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    21   7.3  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   9.6  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   9.6  

>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +2

Query: 278 SPCRRSVVRDYAVSWPCPRFLKMKSLERFMQPS 376
           +P     VR++ V W  P F+  K   RF + S
Sbjct: 33  TPDNNKTVREFNVYWNVPTFMCHKYGLRFEEVS 65


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 615 RIKNNAFIKFYTNNTNYRISRK 550
           RI NN   + YT N  Y+ +R+
Sbjct: 579 RIANNTIQELYTLNNMYKPTRE 600


>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
           protein.
          Length = 128

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -2

Query: 517 FTNCL*NTTPCPSQQTEVRASNSEAL 440
           + NCL +  PC     E++ +  +AL
Sbjct: 46  YVNCLLDQGPCTPDAAELKRNLPDAL 71


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
           protein.
          Length = 128

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -2

Query: 517 FTNCL*NTTPCPSQQTEVRASNSEAL 440
           + NCL +  PC     E++ +  +AL
Sbjct: 46  YVNCLLDQGPCTPDAAELKRNLPDAL 71


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 525 DFTSQIVCRTQHLVHHSK 472
           DFTS +  R  HLV+  K
Sbjct: 122 DFTSDVTERDNHLVNAFK 139


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +2

Query: 161 EDRSFGAPPYLRWSKMKPKRSTRK 232
           E  S+G  PY  WS     +S  K
Sbjct: 830 EVMSYGERPYWNWSNQDVIKSIEK 853


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,743
Number of Sequences: 438
Number of extensions: 2973
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)