Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt19e14
(695 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0336 + 22121913-22122111,22122295-22122344,22122538-221226... 126 2e-29
10_01_0315 - 3454846-3455465,3455562-3455663,3455828-3455954,345... 122 4e-28
04_04_0116 + 22877296-22877482,22877578-22877627,22879057-228791... 110 9e-25
04_04_0115 + 22868554-22868749,22868863-22868912,22870009-228701... 100 2e-21
03_03_0155 - 14933469-14934335,14934529-14934578,14935435-14935447 96 2e-20
09_01_0042 + 764349-764763,764853-764902,765096-765172,766179-76... 87 2e-17
02_04_0314 - 21950400-21950639,21951384-21951680,21951791-219519... 30 2.0
03_01_0566 - 4184379-4184491,4184616-4184726,4184800-4184889,418... 29 2.7
10_08_0414 + 17755427-17756000,17756181-17756308,17756434-177566... 29 4.7
04_03_0780 - 19550106-19550809,19550982-19551003 29 4.7
12_02_1018 - 25344954-25344991,25345133-25345194,25345351-253454... 28 8.1
08_01_0066 - 455589-455687,455902-455976,456531-456677,457158-45... 28 8.1
01_01_0385 + 2981293-2981345,2981803-2981851,2982215-2984953 28 8.1
>02_04_0336 +
22121913-22122111,22122295-22122344,22122538-22122661,
22122810-22122917,22123610-22124265
Length = 378
Score = 126 bits (303), Expect = 2e-29
Identities = 68/163 (41%), Positives = 93/163 (57%), Gaps = 6/163 (3%)
Frame = +2
Query: 182 FSVSVISYGATIQSIQVPDKYGITSDVVLGFDELDGYVNRNTPYLGTTVGRCANRIGGAK 361
FS+ V ++GATI S+ +PD G +DVVLG+D + YVN T Y G +GR ANRI A+
Sbjct: 46 FSIRVTNWGATIMSVILPDSKGNLADVVLGYDTVAEYVN-GTAYFGGLIGRVANRIANAR 104
Query: 362 FSIDGTTYQLANNIGKDHLHGGINGFNKANWN-----STVDGTKVIFSYLSKDGEEGYPG 526
F++DG TY+L N G + LHGG GF+K W + D ++ Y S DGE+G+PG
Sbjct: 105 FTLDGKTYRLFRNDGNNSLHGGHRGFSKVIWTVKEHVAGGDSPRITLYYHSFDGEQGFPG 164
Query: 527 DLITNITYEVTEDNALHVDF-MSXXXXXXXXXXXXHSYFNLAG 652
DL +TYE+ L V + H+Y+NLAG
Sbjct: 165 DLDVFVTYELPRPYVLAVRMNATARGKATPVNLAHHAYWNLAG 207
>10_01_0315 -
3454846-3455465,3455562-3455663,3455828-3455954,
3456698-3456727,3456828-3456877,3457004-3457106
Length = 343
Score = 122 bits (293), Expect = 4e-28
Identities = 67/170 (39%), Positives = 93/170 (54%), Gaps = 14/170 (8%)
Frame = +2
Query: 185 SVSVISYGATIQSIQVPDKYGITSDVVLGFDELDGYVNRN----------TPYLGTTVGR 334
+ + ++GATI S+ VPD +G +DVVLGFD L+ Y+ +PY G VGR
Sbjct: 15 TAKIAAWGATITSLIVPDAHGNLADVVLGFDTLEPYMEYVGTGKGGQKGISPYFGCIVGR 74
Query: 335 CANRIGGAKFSIDGTTYQLANNIGKDHLHGGINGFNKANWN---STVDGTKVIFSYLSKD 505
ANRI KF+++G Y LA N G + LHGG+ GF+K W+ + + F Y SKD
Sbjct: 75 VANRIKEGKFTLNGVEYSLAINNGPNSLHGGLKGFDKVVWDVVERKSECPSITFQYHSKD 134
Query: 506 GEEGYPGDLITNITYEVTEDNALHVDFMS-XXXXXXXXXXXXHSYFNLAG 652
GEEGYPGD+ TY + + L +D + H+Y+NLAG
Sbjct: 135 GEEGYPGDVTVRATYSLPDSTTLRLDMEAVAENKATPINLAQHTYWNLAG 184
>04_04_0116 +
22877296-22877482,22877578-22877627,22879057-22879180,
22879266-22879373,22879462-22880084
Length = 363
Score = 110 bits (265), Expect = 9e-25
Identities = 62/176 (35%), Positives = 91/176 (51%), Gaps = 6/176 (3%)
Frame = +2
Query: 143 ETVSKFTWRASDGFSVSVISYGATIQSIQVPDKYGITSDVVLGFDELDGYVNRNTPYLGT 322
+TV ++ R D FSV + ++GAT+ S+ +PD G +DVVLG D + YVN +T Y G
Sbjct: 30 KTVGEYVLRKGD-FSVKITNWGATMMSVVLPDSKGNLADVVLGLDTIAEYVN-DTNYFGP 87
Query: 323 TVGRCANRIGGAKFSIDGTTYQLANNIGKDHLHGGINGFNKANWN-----STVDGTKVIF 487
GR RI +F +DG Y N G++ +HGG GF+K W D +
Sbjct: 88 VTGRVGQRIARGRFVLDGKVYHTYINDGRNAIHGGHRGFSKVIWTVKEYVGGGDSPYITL 147
Query: 488 SYLSKDGEEGYPGDLITNITYEVTEDNALHVDF-MSXXXXXXXXXXXXHSYFNLAG 652
Y S DGE+G+PGDL +TY+++ L + + H+Y+NL G
Sbjct: 148 YYRSFDGEQGFPGDLDAYVTYQLSSPYVLALRMNATALNKATPVNFLQHTYWNLGG 203
>04_04_0115 +
22868554-22868749,22868863-22868912,22870009-22870195,
22870226-22870333,22872501-22873165
Length = 401
Score = 99.5 bits (237), Expect = 2e-21
Identities = 70/204 (34%), Positives = 93/204 (45%), Gaps = 27/204 (13%)
Frame = +2
Query: 122 DFGQHHGETVSKFTWRASDGFSVSVISYGATIQSIQVPDKYGITSDVVLGFDELDGYVNR 301
D + TV + R D FS+ V ++GA I S+ +PD G DVVLG+D + YVN
Sbjct: 26 DAAERKATTVGVYELRKGD-FSIRVTNWGAVIMSVVLPDSRGKLDDVVLGYDTIAEYVNS 84
Query: 302 NTPYLGTTVGRCANRIGGAKFSIDGTTYQLANNIGKDHLHG------------------- 424
+T Y G VGR ANRI A+F +DG Y L N GK+ LHG
Sbjct: 85 ST-YFGALVGRVANRIAKARFVLDGKAYHLYPNDGKNTLHGILEKFPEVQEIHGAWFIST 143
Query: 425 --GINGFNKANWN-----STVDGTKVIFSYLSKDGEEGYPGDLITNITYEVTEDNALHVD 583
G GF+ W D + Y S DGE+G+PG L +TY+++ L V
Sbjct: 144 NSGHRGFSNVTWTVKEHVGGGDAPYITLYYHSFDGEQGFPGALDVYVTYQLSGPYVLSVH 203
Query: 584 F-MSXXXXXXXXXXXXHSYFNLAG 652
+ HSY+NL G
Sbjct: 204 MNATAAGKATPVNLAQHSYWNLGG 227
>03_03_0155 - 14933469-14934335,14934529-14934578,14935435-14935447
Length = 309
Score = 96.3 bits (229), Expect = 2e-20
Identities = 54/146 (36%), Positives = 76/146 (52%), Gaps = 7/146 (4%)
Frame = +2
Query: 245 GITSDVVLGFDELDGYVNRNTPYLGTTVGRCANRIGGAKFSIDGTTYQLANNIGKDHLHG 424
G DVVLG+ ++ YVN +T Y G VGR ANRI G +F++ G + N GK+ LHG
Sbjct: 5 GHIDDVVLGYKDIGSYVN-DTTYFGALVGRVANRIAGGRFTVKGHAFHTYKNDGKNTLHG 63
Query: 425 GINGFNKANWN----STVDGTKVIFSYLSKDGEEGYPGDLITNITYEVTEDNALHVDFMS 592
G GFN+ W+ +T + F Y S DGE+G+PG L +TY++ D + V +
Sbjct: 64 GHRGFNQVFWSVRERATGHFPYITFYYRSYDGEQGFPGALDVLVTYKIDGDYSFSVTMYA 123
Query: 593 ---XXXXXXXXXXXXHSYFNLAGPRN 661
H+Y+NL G N
Sbjct: 124 RPVDDGKPTPVNLAQHTYWNLRGHGN 149
>09_01_0042 +
764349-764763,764853-764902,765096-765172,766179-766236,
767481-767607,768665-768769,768842-769424,769470-769775,
770048-770139,770391-770440
Length = 620
Score = 86.6 bits (205), Expect = 2e-17
Identities = 46/127 (36%), Positives = 62/127 (48%), Gaps = 5/127 (3%)
Frame = +2
Query: 287 GYVNRNTPYLGTTVGRCANRIGGAKFSIDGTTYQLANNIGKDHLHGGINGFNKANWNSTV 466
G N +PY G VGR ANRI KF+++ Y LA N + LHGG GF+K W
Sbjct: 198 GVPNGTSPYFGCIVGRVANRIKDGKFTLNDKQYSLAINNPPNTLHGGFKGFDKIIWEVAE 257
Query: 467 ----DGTKVIFSYLSKDGEEGYPGDLITNITYEVTEDNALHVDFMS-XXXXXXXXXXXXH 631
+ + F Y SKDGEEG+PGD+ Y + L ++ + H
Sbjct: 258 YVKGENPSITFKYYSKDGEEGFPGDVSVTARYSILASTTLKLEMEAIPLNKATPISLAQH 317
Query: 632 SYFNLAG 652
+Y+NLAG
Sbjct: 318 TYWNLAG 324
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/33 (54%), Positives = 23/33 (69%)
Frame = +2
Query: 194 VISYGATIQSIQVPDKYGITSDVVLGFDELDGY 292
+ + GAT+ S+ VPD G+ DVVLGFD LD Y
Sbjct: 122 ITNVGATVTSLLVPDNNGVLGDVVLGFDSLDPY 154
>02_04_0314 -
21950400-21950639,21951384-21951680,21951791-21951920,
21952377-21952699,21953385-21953606,21953693-21954089,
21954488-21954540
Length = 553
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = -3
Query: 327 TVVPKY-GVFLFTYPSSSSKPRTTSLVIPYLSGT*IDCMVAPY--EMTDTEKPSDALHVN 157
TV+PK V YP++ S T S+++P +S + C+ + E DTE+ D+
Sbjct: 76 TVLPKSTSVRGQDYPTADSVLPTESIIVPEISNAGLKCVADMFSDEDKDTEQDLDSPTEG 135
Query: 156 FETVS 142
F ++S
Sbjct: 136 FSSIS 140
>03_01_0566 -
4184379-4184491,4184616-4184726,4184800-4184889,
4184996-4185113
Length = 143
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 92 IINMVTLNVEDFGQHHGETVSKFTWR 169
I ++VTL D QHHG++ KFT R
Sbjct: 82 IRSLVTLAFADLLQHHGQSARKFTTR 107
>10_08_0414 +
17755427-17756000,17756181-17756308,17756434-17756694,
17756774-17757036,17758662-17759019
Length = 527
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = -3
Query: 378 VPSMLNFAPPILLAQRPTVVPKYGVFLFTYPSSSSK---PRTTSLVIPYLSGT 229
+ S ++F P LL T +G LF PS+ K PR SL++ +LS +
Sbjct: 26 IQSPMDFGPLNLLPTTTTASSDFGRILFHSPSAVLKPQAPRDISLLLSFLSAS 78
>04_03_0780 - 19550106-19550809,19550982-19551003
Length = 241
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 227 QVPDKYGITSDVVLGFDELDGYVNRNTPYLGTTVGRCANR 346
+V DK G+T +LGFD G + TT+GR + R
Sbjct: 66 KVLDKRGLTMWNLLGFDTKAGIATDRPLIVRTTIGRASKR 105
>12_02_1018 -
25344954-25344991,25345133-25345194,25345351-25345483,
25346119-25346182
Length = 98
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +2
Query: 425 GINGFNKANWNSTVDGTKVIFSYLSKDGEEGYPGDL 532
G+NG N++ ++G++ + +Y KDG+ GD+
Sbjct: 28 GVNGMNESKIADLLNGSEYVPTYEDKDGDWMLVGDV 63
>08_01_0066 -
455589-455687,455902-455976,456531-456677,457158-457292,
457380-457508,457719-457814,458212-458403
Length = 290
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = -3
Query: 357 APPILLAQRPTVVPKYGVFLFTYPSSSSKPRTTS 256
+PP+L A+RPTV + G+FL P++S R S
Sbjct: 12 SPPVLSAERPTV--RGGLFLPPSPATSRSLRLQS 43
>01_01_0385 + 2981293-2981345,2981803-2981851,2982215-2984953
Length = 946
Score = 27.9 bits (59), Expect = 8.1
Identities = 21/74 (28%), Positives = 26/74 (35%)
Frame = +2
Query: 296 NRNTPYLGTTVGRCANRIGGAKFSIDGTTYQLANNIGKDHLHGGINGFNKANWNSTVDGT 475
N NTP G T G A + Q A + L G GF K DGT
Sbjct: 557 NANTPGGGATPGMAAAASSSPSYRFPFAALQDATGNFDEGLVIGEGGFGKVYAAVLQDGT 616
Query: 476 KVIFSYLSKDGEEG 517
KV + + +G
Sbjct: 617 KVAVKRANPESRQG 630
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,480,863
Number of Sequences: 37544
Number of extensions: 418722
Number of successful extensions: 951
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 941
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1780264028
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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