Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt19e11
         (319 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119096-1|AAM50956.1|  397|Drosophila melanogaster LP12305p pro...    26   9.1  
AE014297-3263|AAO41592.1|  363|Drosophila melanogaster CG17119-P...    26   9.1  
AE014297-3262|AAF56088.2|  397|Drosophila melanogaster CG17119-P...    26   9.1  

>AY119096-1|AAM50956.1|  397|Drosophila melanogaster LP12305p
           protein.
          Length = 397

 Score = 26.2 bits (55), Expect = 9.1
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -1

Query: 319 FFF**LNLITFVLYSLFNVLLY 254
           F F  LN++ F LYS+FN  LY
Sbjct: 165 FDFLALNIVGFTLYSMFNCGLY 186


>AE014297-3263|AAO41592.1|  363|Drosophila melanogaster CG17119-PB,
           isoform B protein.
          Length = 363

 Score = 26.2 bits (55), Expect = 9.1
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -1

Query: 319 FFF**LNLITFVLYSLFNVLLY 254
           F F  LN++ F LYS+FN  LY
Sbjct: 165 FDFLALNIVGFTLYSMFNCGLY 186


>AE014297-3262|AAF56088.2|  397|Drosophila melanogaster CG17119-PA,
           isoform A protein.
          Length = 397

 Score = 26.2 bits (55), Expect = 9.1
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -1

Query: 319 FFF**LNLITFVLYSLFNVLLY 254
           F F  LN++ F LYS+FN  LY
Sbjct: 165 FDFLALNIVGFTLYSMFNCGLY 186


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,949,775
Number of Sequences: 53049
Number of extensions: 137161
Number of successful extensions: 163
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 163
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 652945002
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)