Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt19e11
         (319 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48045-5|CAD56564.1|  374|Caenorhabditis elegans Hypothetical pr...    28   1.3  
Z48045-4|CAA88102.2|  404|Caenorhabditis elegans Hypothetical pr...    28   1.3  
AF022974-3|AAC48037.1|  346|Caenorhabditis elegans Seven tm rece...    27   2.2  
Z82095-4|CAE18057.1|   65|Caenorhabditis elegans Hypothetical pr...    26   5.1  
Z81129-6|CAB03412.1|  799|Caenorhabditis elegans Hypothetical pr...    26   6.8  
Z81129-5|CAB03411.1|  779|Caenorhabditis elegans Hypothetical pr...    26   6.8  
Z81038-6|CAB02756.1|  233|Caenorhabditis elegans Hypothetical pr...    25   8.9  
U49945-1|AAC47925.1|  414|Caenorhabditis elegans Hypothetical pr...    25   8.9  
DQ340627-1|ABC65815.1|  233|Caenorhabditis elegans chondroitin p...    25   8.9  

>Z48045-5|CAD56564.1|  374|Caenorhabditis elegans Hypothetical
           protein C41C4.7b protein.
          Length = 374

 Score = 28.3 bits (60), Expect = 1.3
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = -1

Query: 319 FFF**LNLITFVLYSLFNVLLYRN 248
           F F  LNL+ F  Y++FN+L+Y N
Sbjct: 162 FDFLSLNLVGFCAYAIFNLLMYYN 185


>Z48045-4|CAA88102.2|  404|Caenorhabditis elegans Hypothetical
           protein C41C4.7a protein.
          Length = 404

 Score = 28.3 bits (60), Expect = 1.3
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = -1

Query: 319 FFF**LNLITFVLYSLFNVLLYRN 248
           F F  LNL+ F  Y++FN+L+Y N
Sbjct: 162 FDFLSLNLVGFCAYAIFNLLMYYN 185


>AF022974-3|AAC48037.1|  346|Caenorhabditis elegans Seven tm
           receptor protein 207 protein.
          Length = 346

 Score = 27.5 bits (58), Expect = 2.2
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 76  LLTKYYIGIFCFFFLFSICKRN 141
           L+T +Y G  C+  L  ICK+N
Sbjct: 215 LITVFYFGFRCYISLQKICKQN 236


>Z82095-4|CAE18057.1|   65|Caenorhabditis elegans Hypothetical
           protein ZK849.6 protein.
          Length = 65

 Score = 26.2 bits (55), Expect = 5.1
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = +1

Query: 46  LSWSGW*ATKLLTKYYIGIFCFFFLFSI 129
           L+W  + A+ ++  +Y+G+F  F LF +
Sbjct: 8   LAWFDYLASPIILCWYLGVFSAFLLFVV 35


>Z81129-6|CAB03412.1|  799|Caenorhabditis elegans Hypothetical
           protein T23F1.7b protein.
          Length = 799

 Score = 25.8 bits (54), Expect = 6.8
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = -3

Query: 197 YKIDGTANTTKTF*NQIIEFLLQIENKKKKQNIPI*YFVNNLVAYH 60
           Y ID   +  KTF   +  + L I NKK +Q+  +   + + ++YH
Sbjct: 279 YPIDTNFHYPKTFAKVLPTYTLSIWNKKTEQSRQLDVQLKDSLSYH 324


>Z81129-5|CAB03411.1|  779|Caenorhabditis elegans Hypothetical
           protein T23F1.7a protein.
          Length = 779

 Score = 25.8 bits (54), Expect = 6.8
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = -3

Query: 197 YKIDGTANTTKTF*NQIIEFLLQIENKKKKQNIPI*YFVNNLVAYH 60
           Y ID   +  KTF   +  + L I NKK +Q+  +   + + ++YH
Sbjct: 259 YPIDTNFHYPKTFAKVLPTYTLSIWNKKTEQSRQLDVQLKDSLSYH 304


>Z81038-6|CAB02756.1|  233|Caenorhabditis elegans Hypothetical
           protein C25A1.8 protein.
          Length = 233

 Score = 25.4 bits (53), Expect = 8.9
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +1

Query: 106 CFFFLFSICKRNSII 150
           C + L+SIC+RNS I
Sbjct: 214 CTYMLYSICERNSTI 228


>U49945-1|AAC47925.1|  414|Caenorhabditis elegans Hypothetical
           protein C02H7.2 protein.
          Length = 414

 Score = 25.4 bits (53), Expect = 8.9
 Identities = 9/20 (45%), Positives = 16/20 (80%)
 Frame = +1

Query: 4   FIDFFIT*VNVLFILSWSGW 63
           FI FF+  V+++F+L+W+ W
Sbjct: 273 FIQFFV--VSLVFLLTWTTW 290


>DQ340627-1|ABC65815.1|  233|Caenorhabditis elegans chondroitin
           proteoglycan-5 protein.
          Length = 233

 Score = 25.4 bits (53), Expect = 8.9
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +1

Query: 106 CFFFLFSICKRNSII 150
           C + L+SIC+RNS I
Sbjct: 214 CTYMLYSICERNSTI 228


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,545,347
Number of Sequences: 27780
Number of extensions: 83378
Number of successful extensions: 219
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 219
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 366105812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)