Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt19e06
(773 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_05_0557 + 23243507-23243855,23243952-23244331,23244866-232449... 106 2e-23
03_01_0424 - 3253179-3253367,3253480-3253556,3253654-3253739,325... 100 1e-21
09_02_0018 + 3016137-3016186,3016529-3016776,3018717-3018811,302... 100 1e-21
10_08_0031 + 14281681-14282023,14282105-14282484,14282581-142826... 99 4e-21
01_06_0517 + 29981537-29981927,29982024-29982231,29982373-299825... 98 8e-21
03_02_0012 - 4914223-4914468,4914511-4914587,4914671-4914732,491... 97 2e-20
03_02_0015 + 4965894-4966214,4966339-4966387,4966504-4966890,496... 93 3e-19
03_02_0013 - 4921925-4922077,4922176-4922252,4922360-4922445,492... 92 5e-19
03_02_0014 + 4955759-4956106,4956229-4956277,4956372-4956579,495... 91 7e-19
08_02_0622 + 19422001-19422330,19422411-19422459,19422552-194227... 87 1e-17
06_01_0319 - 2292071-2292208,2292342-2292418,2292758-2293321,229... 77 2e-14
04_04_1399 - 33249210-33249359,33249521-33249597,33249735-332498... 70 2e-12
11_06_0142 - 20564572-20565951 32 0.58
04_04_0733 + 27639581-27641257 31 1.0
08_02_1123 + 24474434-24474538,24474800-24474860,24475050-244754... 31 1.3
05_07_0328 + 29286109-29286120,29286982-29287146,29288427-292885... 30 1.8
10_08_0804 + 20700414-20700723,20700813-20700924,20701380-207014... 29 4.1
06_01_0370 - 2660569-2661591,2661685-2662260 29 5.4
01_03_0298 + 14771001-14771360 29 5.4
>01_05_0557 +
23243507-23243855,23243952-23244331,23244866-23244931,
23245023-23245136,23245226-23245342,23245444-23245570,
23245660-23246486
Length = 659
Score = 106 bits (254), Expect = 2e-23
Identities = 64/200 (32%), Positives = 103/200 (51%), Gaps = 14/200 (7%)
Frame = +2
Query: 164 SWKIR---LPITIWLPRYTLESLFRDLIAGITVGLTSIPQGIAYAMIAGLPPQIGLYSSI 334
+W++ +P W Y+ S + DL+AG+T+ SIPQGI+YA +AG+PP IGLYS
Sbjct: 61 AWRVARYFVPALDWGAGYSAASFWYDLLAGVTIASLSIPQGISYATLAGIPPVIGLYSCF 120
Query: 335 FPGIVYSLFGSCKDITLGPTAILSALVAKYVA----YSDD------FAYLASFLSGCIVX 484
P +VY++ GS +++ +GP A S LVA V SDD + ++F +G +
Sbjct: 121 VPPLVYAVMGSSRNLGVGPVATSSLLVASIVGGKVRASDDQRLYTQLVFTSAFFTGVLQA 180
Query: 485 XXXXXXXXXXXXXXSKPVIAGFTTAAALQIGASQLRSLFGVSGSSGNTFVKAIINF-FRN 661
S+P I GF A+ I QL+ G++ + T + +++ + F N
Sbjct: 181 ALGLLRLGILVDFMSRPAITGFMGGTAIVIMLQQLKGFLGMTHFTTKTDIVSVLRYIFHN 240
Query: 662 ITTIQLNDSLLGVVTIISLM 721
Q ++LGV +I L+
Sbjct: 241 THQWQWQSTVLGVCFLIFLV 260
>03_01_0424 -
3253179-3253367,3253480-3253556,3253654-3253739,
3253844-3254321,3254393-3254519,3254624-3254740,
3254853-3254966,3256650-3256715,3257738-3258117,
3258217-3258496
Length = 637
Score = 100 bits (240), Expect = 1e-21
Identities = 64/189 (33%), Positives = 90/189 (47%), Gaps = 10/189 (5%)
Frame = +2
Query: 71 SLAYNMKMNGELGEPSRGRLRKTAAKFCGLGSWKIRLPITIWLPRYTLESLFRDLIAGIT 250
+L NMK +P R R+ + + P W P YTL +L DLIAGIT
Sbjct: 10 TLGGNMKETFLPDDPFRVVRRERGCGRRAAAALRYVFPFMEWAPSYTLGTLKSDLIAGIT 69
Query: 251 VGLTSIPQGIAYAMIAGLPPQIGLYSSIFPGIVYSLFGSCKDITLGPTAILSALVAKYV- 427
+ +IPQGI+YA +A LPP +GLYSS P +VY++ GS +D+ +G A+ S L+ +
Sbjct: 70 IASLAIPQGISYAKLANLPPVLGLYSSFVPPLVYAMMGSSRDLAVGTVAVASLLIGSMLS 129
Query: 428 ----AYSDDFAYL-----ASFLSGCIVXXXXXXXXXXXXXXXSKPVIAGFTTAAALQIGA 580
A D YL A+F +G S I GF AA +
Sbjct: 130 EEVSAAEDPALYLHVALTATFFAGVFQALLGVLRLGFIVDFLSHATIVGFMGGAATVVCL 189
Query: 581 SQLRSLFGV 607
QL+ +FG+
Sbjct: 190 QQLKGMFGL 198
>09_02_0018 +
3016137-3016186,3016529-3016776,3018717-3018811,
3020025-3020330,3021288-3021336,3021436-3021637,
3023364-3023532,3023605-3023634,3023742-3023807,
3025313-3025378,3029404-3029464,3029592-3029719,
3030716-3030757,3031074-3031190,3031280-3031339
Length = 562
Score = 100 bits (239), Expect = 1e-21
Identities = 63/187 (33%), Positives = 94/187 (50%), Gaps = 10/187 (5%)
Frame = +2
Query: 113 PSRGRLRKTAAKFCGLGSW-KIRLPITIWLPRYTL-ESLFRDLIAGITVGLTSIPQGIAY 286
PS + A+ G W + LP W+ Y L E L DL AGITVG+ +PQ ++Y
Sbjct: 178 PSWWSVVMVKARGMGPRDWAEAALPCLSWMRTYRLKEDLQADLAAGITVGVMLVPQAMSY 237
Query: 287 AMIAGLPPQIGLYSSIFPGIVYSLFGSCKDITLGPTAILSALVAKYVA--------YSDD 442
A +AGL P GLY+ P VY++FGS + + +GP A++S LV+ + +
Sbjct: 238 AKLAGLHPIYGLYTGFVPLFVYAIFGSSRQLAVGPVALVSLLVSNVLGGIVDSSSELYTE 297
Query: 443 FAYLASFLSGCIVXXXXXXXXXXXXXXXSKPVIAGFTTAAALQIGASQLRSLFGVSGSSG 622
A L +F+ G + S VI+GFTTA+A+ IG SQ++ G S +
Sbjct: 298 LAILLAFMVGVLECLMGLLRLGWLIRFISHSVISGFTTASAIVIGLSQIKYFLGYSVTRS 357
Query: 623 NTFVKAI 643
+ + I
Sbjct: 358 SKIIPLI 364
>10_08_0031 +
14281681-14282023,14282105-14282484,14282581-14282646,
14284078-14284191,14284302-14284418,14284526-14284652,
14284779-14285065,14285200-14285390,14285504-14285589,
14285718-14285794,14285902-14286090
Length = 658
Score = 98.7 bits (235), Expect = 4e-21
Identities = 56/189 (29%), Positives = 96/189 (50%), Gaps = 10/189 (5%)
Frame = +2
Query: 110 EPSRGRLRKTAAKFCGLGSWKIRLPITIWLPRYTLESLFRDLIAGITVGLTSIPQGIAYA 289
+P R R++ + L + + P WLP Y+L +L+ D++AG+T+ ++PQGI+YA
Sbjct: 45 DPFRAVARESGGRRA-LAALRYVFPFLEWLPSYSLAALWSDVVAGVTIASLAVPQGISYA 103
Query: 290 MIAGLPPQIGLYSSIFPGIVYSLFGSCKDITLGPTAILSALVAKYVAYSDD--------- 442
+ LPP +GLYSS P +VY++ GS +++ +G TA+ S L A +
Sbjct: 104 KLGDLPPIMGLYSSFVPPLVYAVMGSSRELAVGTTAVASLLFAATLGKEAPPGEKPELYA 163
Query: 443 -FAYLASFLSGCIVXXXXXXXXXXXXXXXSKPVIAGFTTAAALQIGASQLRSLFGVSGSS 619
A+ A+F +G + S I GF AA + QL+ + G++ +
Sbjct: 164 ALAFTATFFAGVLQAGLGVLRLGFLVDLLSHAAIVGFMAGAATIVCLQQLKGMLGLAHFT 223
Query: 620 GNTFVKAII 646
+T V A++
Sbjct: 224 TSTDVVAVV 232
>01_06_0517 +
29981537-29981927,29982024-29982231,29982373-29982544,
29984468-29984533,29984658-29984771,29984880-29984996,
29985097-29985223,29985317-29985603,29985701-29985891,
29985981-29986063,29986175-29986251,29986729-29986896
Length = 666
Score = 97.9 bits (233), Expect = 8e-21
Identities = 61/199 (30%), Positives = 99/199 (49%), Gaps = 11/199 (5%)
Frame = +2
Query: 170 KIRLPITIWLPRYTLESLFRDLIAGITVGLTSIPQGIAYAMIAGLPPQIGLYSSIFPGIV 349
K +P W+PRY L+ DL+AGIT+ +IPQGI+YA +A LPP IGLYSS P ++
Sbjct: 80 KYFVPALDWVPRYGLDKFKFDLLAGITIASLAIPQGISYARLANLPPIIGLYSSFVPPLM 139
Query: 350 YSLFGSCKDITLGPTAILSALVAKYV---AYSDD-------FAYLASFLSGCIVXXXXXX 499
Y++FGS ++ +G A S L+A + +D+ Y A+F +G
Sbjct: 140 YAVFGSSNNLAVGTVAAASLLLASIIETEVAADENPQLYLQLFYTAAFFTGLFQTALGVF 199
Query: 500 XXXXXXXXXSKPVIAGFTTAAALQIGASQLRSLFGVSGSSGNTFVKAII-NFFRNITTIQ 676
S+ I GF A+ I Q + L G+ + T + +++ + + +
Sbjct: 200 RLGLIVDFLSRSTITGFMGGTAMIIILQQFKGLLGMKHFTTKTDIISVLHSTYHYRHEWK 259
Query: 677 LNDSLLGVVTIISLMLLKH 733
++LG+ ++ LM KH
Sbjct: 260 WQSAVLGICFLLFLMSSKH 278
>03_02_0012 -
4914223-4914468,4914511-4914587,4914671-4914732,
4914825-4915018,4915153-4915439,4915520-4915646,
4916216-4916446,4917210-4917384,4917461-4917668,
4917745-4917793,4918016-4918300
Length = 646
Score = 96.7 bits (230), Expect = 2e-20
Identities = 56/164 (34%), Positives = 83/164 (50%), Gaps = 10/164 (6%)
Frame = +2
Query: 182 PITIWLPRYTLESLFRDLIAGITVGLTSIPQGIAYAMIAGLPPQIGLYSSIFPGIVYSLF 361
PI W Y L+ DL+AG+T+ SIPQ I YA +A L PQ GLY+S+ P +VY++
Sbjct: 65 PILDWWKTYNLKFFRSDLMAGLTLASLSIPQSIGYATLAKLDPQYGLYTSVVPPLVYAVT 124
Query: 362 GSCKDITLGPTAILSALVAKYV----------AYSDDFAYLASFLSGCIVXXXXXXXXXX 511
GS ++I +GP AI+S L++ + A+ + +FL+G
Sbjct: 125 GSSREIAIGPVAIVSLLLSSMIQKIVDPSVDPAFYRKMVFTVTFLTGVFQFAFGLFRLGF 184
Query: 512 XXXXXSKPVIAGFTTAAALQIGASQLRSLFGVSGSSGNTFVKAI 643
S I GF AA+ IG QL+ L G+S + T V ++
Sbjct: 185 LVDFLSHAAIVGFMGGAAIVIGLQQLKGLLGLSHFTNRTDVVSV 228
>03_02_0015 +
4965894-4966214,4966339-4966387,4966504-4966890,
4966976-4967034,4967128-4967241,4967344-4967460,
4967558-4967684,4967764-4968050,4968148-4968338,
4968801-4968886,4968975-4969051,4969161-4969304
Length = 652
Score = 92.7 bits (220), Expect = 3e-19
Identities = 51/165 (30%), Positives = 82/165 (49%), Gaps = 10/165 (6%)
Frame = +2
Query: 182 PITIWLPRYTLESLFRDLIAGITVGLTSIPQGIAYAMIAGLPPQIGLYSSIFPGIVYSLF 361
P+ W +YTL DLIAG+T+ IPQ I YA +A LPP+IGL+SS P ++Y+L
Sbjct: 77 PVFEWGRQYTLAKFKGDLIAGLTLASLVIPQDIGYAKLANLPPEIGLHSSFVPPLIYALM 136
Query: 362 GSCKDITLGPTAILSALVAKYVAYSDD----------FAYLASFLSGCIVXXXXXXXXXX 511
G+ +++ +GP A++S L+ + D A+ A+F +G
Sbjct: 137 GTSRELAMGPVAVISLLLGTLLQEEIDSKKNPLDYRRLAFTATFFAGVTQAALGFCRLGF 196
Query: 512 XXXXXSKPVIAGFTTAAALQIGASQLRSLFGVSGSSGNTFVKAII 646
S I GF AA+ I QL+ G++ + T + +++
Sbjct: 197 IIAFLSHAAIIGFMAGAAITIALQQLKGFLGIANFTKKTDIISVM 241
>03_02_0013 -
4921925-4922077,4922176-4922252,4922360-4922445,
4922527-4922720,4922829-4923115,4923219-4923345,
4923586-4923816,4923982-4924047,4925300-4925474,
4925563-4925770,4925886-4925934,4926249-4926578
Length = 660
Score = 91.9 bits (218), Expect = 5e-19
Identities = 53/165 (32%), Positives = 85/165 (51%), Gaps = 10/165 (6%)
Frame = +2
Query: 182 PITIWLPRYTLESLFRDLIAGITVGLTSIPQGIAYAMIAGLPPQIGLYSSIFPGIVYSLF 361
P+ W Y + D++AG+T+ IPQ I YA +A L PQ GLY+S+ P ++Y++
Sbjct: 80 PVLQWGRTYNFKLFRSDVMAGLTLASLGIPQSIGYANLAKLDPQYGLYTSVVPPLIYAVM 139
Query: 362 GSCKDITLGPTAI----LSALVAKYVAYSDD------FAYLASFLSGCIVXXXXXXXXXX 511
G+ ++I +GP A+ LS++V+K V + D + +FL+G
Sbjct: 140 GTSREIAIGPVAVVSLLLSSMVSKIVDPAVDPVTYRALVFTVTFLAGVFQVSFGLFRLGF 199
Query: 512 XXXXXSKPVIAGFTTAAALQIGASQLRSLFGVSGSSGNTFVKAII 646
S I GF AA+ IG QL+ L G+S + +T V ++I
Sbjct: 200 LVDFLSHAAIVGFMAGAAIVIGLQQLKGLLGLSHFTNSTDVVSVI 244
>03_02_0014 +
4955759-4956106,4956229-4956277,4956372-4956579,
4956700-4956874,4956981-4957046,4957150-4957263,
4957366-4957482,4957589-4957715,4957826-4958112,
4958209-4958399,4958937-4959022,4959117-4959193,
4959330-4959473
Length = 662
Score = 91.5 bits (217), Expect = 7e-19
Identities = 50/165 (30%), Positives = 78/165 (47%), Gaps = 10/165 (6%)
Frame = +2
Query: 182 PITIWLPRYTLESLFRDLIAGITVGLTSIPQGIAYAMIAGLPPQIGLYSSIFPGIVYSLF 361
P+ W YT DL++G+T+ IPQ I YA +AGL P GLYSS P ++Y++
Sbjct: 86 PVLDWGRHYTFRKFRGDLVSGLTIASLCIPQDIGYAKLAGLLPNYGLYSSFVPPLIYAMM 145
Query: 362 GSCKDITLGPTAILSALVAKYVAYSDD----------FAYLASFLSGCIVXXXXXXXXXX 511
GS +DI +GP A++S L+ + D A+ A+F +G
Sbjct: 146 GSSRDIAIGPVAVVSLLLGTLLQNEFDPKKNQEEYTRLAFTATFFAGVTQAALGFLRLGF 205
Query: 512 XXXXXSKPVIAGFTTAAALQIGASQLRSLFGVSGSSGNTFVKAII 646
S I GF AA+ I QL+ G++ + T + +++
Sbjct: 206 IIEFLSHAAIVGFMAGAAITIALQQLKGFLGIANFTKKTDIISVM 250
>08_02_0622 +
19422001-19422330,19422411-19422459,19422552-19422759,
19422832-19423006,19423101-19423166,19423264-19423377,
19423473-19423589,19423677-19423803,19423893-19424179,
19424279-19424469,19424571-19424656,19424749-19424825,
19425057-19425200
Length = 656
Score = 87.4 bits (207), Expect = 1e-17
Identities = 56/173 (32%), Positives = 79/173 (45%), Gaps = 10/173 (5%)
Frame = +2
Query: 182 PITIWLPRYTLESLFRDLIAGITVGLTSIPQGIAYAMIAGLPPQIGLYSSIFPGIVYSLF 361
PI W Y L DLIAG+T+ IPQ I Y+ +A L Q GLYSS P ++Y+
Sbjct: 80 PIFEWGRCYNLRKFKGDLIAGLTIASLCIPQDIGYSKLANLDAQYGLYSSFVPPLIYAAM 139
Query: 362 GSCKDITLGPTAILSALVAKYVAYSDD----------FAYLASFLSGCIVXXXXXXXXXX 511
GS KDI +GP A++S L+ + D A+ A+F +G
Sbjct: 140 GSSKDIAIGPVAVVSLLIGSLLQNEVDPVKNKEEYLRLAFTATFFAGITQAALGFLRLGF 199
Query: 512 XXXXXSKPVIAGFTTAAALQIGASQLRSLFGVSGSSGNTFVKAIINFFRNITT 670
S I GF AA+ I QL+ + G+ + T II+ R++ T
Sbjct: 200 LIEFLSHAAIVGFMGGAAITIALQQLKYVLGIKSFTKKT---DIISVMRSVWT 249
>06_01_0319 -
2292071-2292208,2292342-2292418,2292758-2293321,
2293978-2294104,2294207-2294323,2294440-2294547,
2296567-2296804,2296915-2297122,2297199-2297247,
2297384-2297728
Length = 656
Score = 77.0 bits (181), Expect = 2e-14
Identities = 50/164 (30%), Positives = 80/164 (48%), Gaps = 11/164 (6%)
Frame = +2
Query: 275 GIAYAMIAGLPPQIGLYSSIFPGIVYSLFGSCKDITLGPTAILSALVAKYV--AYSDD-- 442
GI+YA +A LPP IGLYSS P ++YSL GS +D+ +GP +I S ++ + A S D
Sbjct: 116 GISYAKLANLPPIIGLYSSFVPPLIYSLLGSSRDLAVGPVSIASLVMGSMLRQAVSPDQE 175
Query: 443 ------FAYLASFLSGCIVXXXXXXXXXXXXXXXSKPVIAGFTTAAALQIGASQLRSLFG 604
A+ ++F +G SK + GF AA+ + QL+ L G
Sbjct: 176 PILYLQLAFTSTFFAGVFQASLGFLRLGFIVDFLSKATLTGFMGGAAIIVSLQQLKGLLG 235
Query: 605 -VSGSSGNTFVKAIINFFRNITTIQLNDSLLGVVTIISLMLLKH 733
+ +S FV+ + + F++ L+GV + L+ +H
Sbjct: 236 IIHFTSQMGFVQVMHSVFKHHDEWAWQTILMGVAFLAVLLTTRH 279
>04_04_1399 -
33249210-33249359,33249521-33249597,33249735-33249814,
33249904-33250094,33250183-33250469,33250595-33250721,
33250878-33250994,33251085-33251198,33251510-33251671,
33252909-33252974,33253098-33253269,33253377-33253584,
33253728-33253776,33254132-33254305
Length = 657
Score = 70.1 bits (164), Expect = 2e-12
Identities = 45/167 (26%), Positives = 79/167 (47%), Gaps = 11/167 (6%)
Frame = +2
Query: 275 GIAYAMIAGLPPQIGLYSSIFPGIVYSLFGSCKDITLGPTAILSALVAKYV--AYSD--- 439
GI+YA +A LPP IGLYSS P +VY++ GS +D+ +GP +I S ++ + A S
Sbjct: 59 GISYAKLASLPPIIGLYSSFVPPMVYAVLGSSRDLAVGPVSIASLIMGSMLRQAVSPAAE 118
Query: 440 -----DFAYLASFLSGCIVXXXXXXXXXXXXXXXSKPVIAGFTTAAALQIGASQLRSLFG 604
A+ ++F +G + SK + GF AA+ + QL++L G
Sbjct: 119 PLLFLQLAFTSTFFAGLVQASLGILRLGFIIDFLSKATLVGFMAGAAIIVSLQQLKALLG 178
Query: 605 -VSGSSGNTFVKAIINFFRNITTIQLNDSLLGVVTIISLMLLKHATI 742
V ++ V + + + L+ V ++ L+ +H ++
Sbjct: 179 IVHFTTEMGLVPVMASVIHHTKEWSWQTILMAVCFLVLLLTARHVSV 225
>11_06_0142 - 20564572-20565951
Length = 459
Score = 31.9 bits (69), Expect = 0.58
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -1
Query: 758 SPDPPESSRASTALMILS*PRPAKSHLAESL 666
+P PP SS +T LM + PRP HL +++
Sbjct: 272 APPPPPSSPVATMLMFATPPRPCNHHLKKTM 302
>04_04_0733 + 27639581-27641257
Length = 558
Score = 31.1 bits (67), Expect = 1.0
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = -3
Query: 618 EEPETPNRDLSWDA--PI*SAAAVVKPAITGFDMKSNMNPSCKIPNSRTIHPDKNEAKYA 445
+ PE P DLS A P+ ++AA V+P + G + P IP+S I +N+A
Sbjct: 435 DAPE-PALDLSIAANPPLLASAATVRPKVGGSSFHLDAPPPVYIPSSPAIPSQRNKATAT 493
Query: 444 KSSEYA 427
S+ A
Sbjct: 494 TGSQNA 499
>08_02_1123 +
24474434-24474538,24474800-24474860,24475050-24475477,
24475915-24476231,24476991-24477216,24477302-24477547,
24477635-24477745,24478051-24478182,24478297-24478325,
24478352-24478502
Length = 601
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +2
Query: 641 IINFFRNITTIQLNDSLLGVVTIISL 718
I NFF N +T+QLN +L T++S+
Sbjct: 487 IRNFFENTSTVQLNHRILATTTLLSV 512
>05_07_0328 +
29286109-29286120,29286982-29287146,29288427-29288589,
29288625-29288903,29289047-29289122,29289725-29289787,
29292116-29292164,29292413-29292504,29293017-29293068,
29293209-29293271,29293382-29293431,29293941-29294016,
29294444-29294656,29294763-29294869,29294966-29295074,
29295489-29295689,29295773-29296033,29296154-29296171,
29296287-29296397,29296755-29297030,29297108-29297382,
29297814-29298165,29298371-29298655,29298715-29299261,
29301658-29301781,29301871-29301946,29302062-29302136,
29302300-29302353,29302833-29302892,29302977-29303093,
29303228-29303361,29303480-29303682,29303879-29303976,
29304358-29304461,29304537-29304702,29304803-29304925,
29305047-29305129,29305217-29305358,29305523-29305549,
29305784-29305854,29305930-29306518
Length = 2046
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = -3
Query: 747 TGIVACFNSINDIIVTTPSKESFS*IVVMFLKKLMMAFTNVLPEEPETPNRDL--SWDAP 574
T + C N+IND+++ P + S I V FL++ +++ T +R+L W+AP
Sbjct: 647 TQTLFCQNAINDLLIQVPFLITASFIFVAFLRQKVVSVTANSVRLVSCTSRELVDQWNAP 706
>10_08_0804 +
20700414-20700723,20700813-20700924,20701380-20701467,
20702530-20702910
Length = 296
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +1
Query: 565 ASNRSIPAEIPVWSFWLLGQYVREGHH*LLQKHHNDSAK*LFAGR--GHDNIINAVEAR 735
++N + + +W FW+ GQY + H ++ SA AGR G+ I N + R
Sbjct: 193 STNAVVSFKTAIW-FWMTGQYNKPSSHDVILGRWTPSAADTAAGRVPGYGVITNIINGR 250
>06_01_0370 - 2660569-2661591,2661685-2662260
Length = 532
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +2
Query: 74 LAYNMKMNGELGEPSRGRLRKTAAKFCGLGSWKIRLPITIWLPR 205
L Y+ NG L + G L +++ + SWK+R+ + + + R
Sbjct: 313 LVYDYMENGSLADQLHGHLSSSSSSSPVMASWKMRIKMLLGVSR 356
>01_03_0298 + 14771001-14771360
Length = 119
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +2
Query: 89 KMNGELGEPSRGRLRK-TAAKFCGLGSWKIRLPITIWLPRYTLESLFRDLIAGITVGL 259
K G+ G+ GR RK T G+ K + + +WLP +E L ++ G+ G+
Sbjct: 20 KRCGDKGDGGGGRKRKKTYLNVLGVCCSKEGVEVLMWLPAPAMERLVAEVARGLVGGV 77
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,333,490
Number of Sequences: 37544
Number of extensions: 505260
Number of successful extensions: 1268
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1236
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1265
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2068401984
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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