BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt19e06
(773 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 25 0.78
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 25 0.78
DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor p... 23 3.2
DQ091183-1|AAZ42363.1| 128|Apis mellifera lipophorin receptor p... 23 3.2
AY343324-1|AAQ21381.1| 156|Apis mellifera vacuolar H+ ATP synth... 23 3.2
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 3.2
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 23 4.2
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 22 7.3
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 22 7.3
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 22 7.3
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 22 7.3
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 21 9.6
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 21 9.6
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 21 9.6
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 21 9.6
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 21 9.6
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 25.0 bits (52), Expect = 0.78
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = -2
Query: 637 LHERIARGARNSKQGSQLGCSDLKRRGRCE 548
+ ++ G ++ KQGS G S + + CE
Sbjct: 771 IRRKVTMGDKSKKQGSSAGTSSITKYTGCE 800
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 25.0 bits (52), Expect = 0.78
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = -2
Query: 637 LHERIARGARNSKQGSQLGCSDLKRRGRCE 548
+ ++ G ++ KQGS G S + + CE
Sbjct: 861 IRRKVTMGDKSKKQGSSAGTSSITKYTGCE 890
>DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor
protein.
Length = 157
Score = 23.0 bits (47), Expect = 3.2
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 209 TLESLFRDLIAGITVGLTSI 268
T ES L+AGI +G+TS+
Sbjct: 124 TSESTDPGLVAGIVIGVTSL 143
>DQ091183-1|AAZ42363.1| 128|Apis mellifera lipophorin receptor
protein.
Length = 128
Score = 23.0 bits (47), Expect = 3.2
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 209 TLESLFRDLIAGITVGLTSI 268
T ES L+AGI +G+TS+
Sbjct: 95 TSESTDPGLVAGIVIGVTSL 114
>AY343324-1|AAQ21381.1| 156|Apis mellifera vacuolar H+ ATP synthase
16 kDa proteolipidsubunit protein.
Length = 156
Score = 23.0 bits (47), Expect = 3.2
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 206 YTLESLFRDLIAGITVGLTSIPQGIAYAMI 295
YTL F L AG+ VG + + G A ++
Sbjct: 85 YTLFKGFVHLGAGLAVGFSGLAAGFAIGIV 114
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 23.0 bits (47), Expect = 3.2
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -1
Query: 758 SPDPPESSRASTALMI 711
SP+PP+SS +ST I
Sbjct: 352 SPEPPKSSESSTGSSI 367
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 22.6 bits (46), Expect = 4.2
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +1
Query: 85 YEDEW*IRGTLKGPVKENSGKVLRPGLVEDKTSNHDMASTLYI 213
Y D W + L PV + ++ GL + S HD + L +
Sbjct: 312 YMDNWKMMMYLGTPVMPDLNALIATGLYINDLSMHDFSRDLML 354
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 21.8 bits (44), Expect = 7.3
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 290 MIAGLPPQIGLYSSIFPGIVYSLF 361
+I+GLPP+I S FP + F
Sbjct: 103 LISGLPPEIYYIWSHFPYVFGEAF 126
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.8 bits (44), Expect = 7.3
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +2
Query: 197 LPRYTLESLFRD 232
LPR+TLE F D
Sbjct: 206 LPRFTLEKFFTD 217
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.8 bits (44), Expect = 7.3
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +2
Query: 197 LPRYTLESLFRD 232
LPR+TLE F D
Sbjct: 206 LPRFTLEKFFTD 217
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 21.8 bits (44), Expect = 7.3
Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Frame = +2
Query: 248 TVGLTSIPQGIAY--AMIAGLPPQIGLYSSIFPGIVYSL--FGSCKDITLGPTAILSALV 415
TV L GI + ++ LP G S+ I+ SL F + PT++ L+
Sbjct: 253 TVNLIIPCVGITFLTVLVFYLPSDSGEKVSLCSSILLSLTVFFLLLAEIIPPTSLAIPLL 312
Query: 416 AKYVAYSDDFAYLASFLSGCIV 481
KY+ ++ L+ +++ C++
Sbjct: 313 GKYLLFTMILVTLSIWITVCVL 334
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 21.4 bits (43), Expect = 9.6
Identities = 8/18 (44%), Positives = 11/18 (61%), Gaps = 1/18 (5%)
Frame = +3
Query: 192 YGFHVIHWNLCLG-ILLP 242
Y F ++ W LC G + LP
Sbjct: 777 YAFGILFWYLCAGHVRLP 794
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 21.4 bits (43), Expect = 9.6
Identities = 8/18 (44%), Positives = 11/18 (61%), Gaps = 1/18 (5%)
Frame = +3
Query: 192 YGFHVIHWNLCLG-ILLP 242
Y F ++ W LC G + LP
Sbjct: 815 YAFGILFWYLCAGHVRLP 832
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 21.4 bits (43), Expect = 9.6
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = -3
Query: 132 LNRPLEGSPNSPFIFIL 82
L RP +G+ + PF F++
Sbjct: 306 LKRPSDGATSEPFPFLM 322
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 21.4 bits (43), Expect = 9.6
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = -3
Query: 132 LNRPLEGSPNSPFIFIL 82
L RP +G+ + PF F++
Sbjct: 306 LKRPSDGATSEPFPFLM 322
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 21.4 bits (43), Expect = 9.6
Identities = 9/34 (26%), Positives = 16/34 (47%)
Frame = -3
Query: 501 CKIPNSRTIHPDKNEAKYAKSSEYATYLATRADN 400
C+ PN+ +KN K+ + + T T +N
Sbjct: 436 CRYPNASVTPYNKNYTKFCSTEKRLTKQNTAFEN 469
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 225,423
Number of Sequences: 438
Number of extensions: 4933
Number of successful extensions: 17
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24275400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -