Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt19d24
(721 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 66 6e-12
SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 54 3e-08
SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces pomb... 53 4e-08
SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr ... 52 6e-08
SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 47 3e-06
SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces pomb... 44 2e-05
SPAC23D3.11 |ayr1||1-acyldihydroxyacetone phosphate reductase |S... 40 3e-04
SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar... 39 6e-04
SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces pomb... 38 0.002
SPBC16H5.14c ||SPBC21H7.08|short chain dehydrogenase DHRS family... 31 0.13
SPBC2A9.02 |||NAD dependent epimerase/dehydratase family protein... 31 0.17
SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 29 0.51
SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces po... 29 0.51
SPAP7G5.04c |lys1||aminoadipate-semialdehyde dehydrogenase |Schi... 29 0.67
SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces pom... 27 2.7
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 27 2.7
SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase |Schizosa... 27 3.6
SPBC16H5.03c |fub2|uba2|SUMO E1-like activator enzyme Fub2|Schiz... 27 3.6
SPAC890.07c |rmt1|prmt1|type I protein arginine N-methyltransfer... 26 4.7
SPAC3F10.04 |gsa1|gsh2|glutathione synthetase large subunit Gsa1... 26 4.7
SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory sub... 26 6.2
>SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 259
Score = 65.7 bits (153), Expect = 6e-12
Identities = 51/189 (26%), Positives = 90/189 (47%), Gaps = 4/189 (2%)
Frame = +1
Query: 46 KVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGQSLQAELNSKYGNKTKFYRSDV 225
K + ITGA++GIG+S + + + + + EL SKY + DV
Sbjct: 7 KTILITGASSGIGKSTAFEIAKVAKVKLILAARRFSTVEEIAKELESKYEVSVLPLKLDV 66
Query: 226 TDEEHFLGILNAVVQEQGGIDVVINNAALMNDSIGIYKKAIEVNVTALITSTLKAI---- 393
+D + G++ ++ +E IDV+INNA L + + I+ VT + T+ L +
Sbjct: 67 SDLKSIPGVIESLPKEFADIDVLINNAGLALGTDKVIDLNIDDAVTMITTNVLGMMAMTR 126
Query: 394 EIMGKHSGGKGGTVINVSSVAALTQSHVMPIYFATKSAVLQFSNCIGRPEHFSKTGVRVL 573
++ G ++NV S+A +Y +TKSA+ QF++ + R E T +R++
Sbjct: 127 AVLPIFYSKNKGDILNVGSIAGRESYVGGSVYCSTKSALAQFTSAL-RKETID-TRIRIM 184
Query: 574 TVCFGATDT 600
V G +T
Sbjct: 185 EVDPGLVET 193
>SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 292
Score = 53.6 bits (123), Expect = 3e-08
Identities = 49/168 (29%), Positives = 80/168 (47%), Gaps = 6/168 (3%)
Frame = +1
Query: 52 VFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGQSLQAELNSKYGNKTKFYRSDVTD 231
V ITG++ G+G ++V++ L +G IA A ++ E +K + DVTD
Sbjct: 8 VLITGSSKGLGYALVKVGLAQGYNVIA----CSRAPDTITIE-----HSKLLKLKLDVTD 58
Query: 232 EEHFLGILNAVVQEQGGIDVVINNAA--LMND----SIGIYKKAIEVNVTALITSTLKAI 393
+ + G +D+VINNA L+ + +I + + VN + T +A+
Sbjct: 59 VKSVETAFKDAKRRFGNVDIVINNAGYGLVGEFESYNIEEMHRQMNVNFWGVAYITKEAL 118
Query: 394 EIMGKHSGGKGGTVINVSSVAALTQSHVMPIYFATKSAVLQFSNCIGR 537
+M GKGG ++ +SSVA S + +Y A+K AV S I R
Sbjct: 119 NLM--RESGKGGRILQISSVAGYYPSPCLSMYNASKFAVEGLSQTIMR 164
>SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 53.2 bits (122), Expect = 4e-08
Identities = 52/199 (26%), Positives = 94/199 (47%), Gaps = 7/199 (3%)
Frame = +1
Query: 46 KVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGQSLQAELNSKYGNKTKFYRSDV 225
+VV ITGAA GIG+ + ++ + G + +A +DI + SK + ++DV
Sbjct: 6 RVVLITGAAGGIGKVLCKMFTELGDR-VAGIDIVDP----------SKVQDAALALQADV 54
Query: 226 TDEEHFLGILNAVVQEQGGIDVVINNAALMNDS--IGIYKKAIEVNVTALITSTLKAIEI 399
+ + + V+Q G IDV+INNA L +D+ + ++ + +V+ ++
Sbjct: 55 SKADQIETAIEKVIQTLGPIDVLINNAGLADDTPFEQLSHESWDHDVSLVLRGNYLTQRY 114
Query: 400 MGKHSG--GKGGTVINVSSVAALTQSHV---MPIYFATKSAVLQFSNCIGRPEHFSKTGV 564
+ H GKGG+++N+ SV H+ P Y A K+ + + + + G+
Sbjct: 115 VIPHMAKQGKGGSIVNIGSV----NGHIYLGSPAYSAAKAGLENLTKALA--VRYGPLGI 168
Query: 565 RVLTVCFGATDTALLTDEK 621
RV VC T + DE+
Sbjct: 169 RV-NVCAPGTIWSPAWDER 186
>SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 255
Score = 52.4 bits (120), Expect = 6e-08
Identities = 50/202 (24%), Positives = 81/202 (40%), Gaps = 7/202 (3%)
Frame = +1
Query: 40 KDKVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGQSLQAELNSKYGNKTKFYRS 219
K K ITG + GIG S+ + G ++ +L + AEL K+G + K Y
Sbjct: 8 KGKTTLITGGSGGIGFSIAKAFAAAG-SNVGLLYGRNKKALEYAAELRDKHGVQAKAYSC 66
Query: 220 DVTDEEHFLGILNAVVQEQGG-IDVVINNAALMNDSIGIYKKAIEV--NVTAL-ITSTLK 387
+ + + N V+E GG +DV+I NA + + + K ++ V + +
Sbjct: 67 PIENRSAVIETTNQAVEELGGRLDVMIANAGIAIPHLSLEDKNEDIWTKVVGINLNGAYY 126
Query: 388 AIEIMGKH--SGGKGGTVINVSSVAALTQ-SHVMPIYFATKSAVLQFSNCIGRPEHFSKT 558
+ G H GKG + S + Y ATK+AV + + E
Sbjct: 127 TAQAAGHHFKKQGKGSLIFTASMSGHIANWPQQWASYHATKAAVKHLARALA-VEWAPFA 185
Query: 559 GVRVLTVCFGATDTALLTDEKL 624
V ++ + TD L DE L
Sbjct: 186 RVNSVSPGYIDTDLTLYADENL 207
>SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 46.8 bits (106), Expect = 3e-06
Identities = 44/198 (22%), Positives = 87/198 (43%), Gaps = 8/198 (4%)
Frame = +1
Query: 43 DKVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGQS-LQAELNSKYGNKTKFYRS 219
+K +TG +GIG++ + EG + I + EE + + +L + G +
Sbjct: 42 EKKTLLTGGDSGIGKAAAVMFAREG-SDLVISCLPEERDDAEVTRDLIEREGRNCWIWEG 100
Query: 220 DVTDEEHFLGILNAVVQEQGGIDVVINNAALMNDSIGI-------YKKAIEVNVTALITS 378
+ ++ +++ +++ G IDV++NN A + I + + N+ +
Sbjct: 101 KLDKSDNCRDLVDFALKKLGWIDVLVNNIAYQQVAQSIEDIDDEQWDLTFKTNIFSFFWV 160
Query: 379 TLKAIEIMGKHSGGKGGTVINVSSVAALTQSHVMPIYFATKSAVLQFSNCIGRPEHFSKT 558
T AI M G +++N SS+ A + Y +TK A+ F+ G +++
Sbjct: 161 TKAAISHM-----KSGSSIVNCSSINAYVGRPDLLDYTSTKGAITAFTR--GLSNQYAQH 213
Query: 559 GVRVLTVCFGATDTALLT 612
G+RV V G T L++
Sbjct: 214 GIRVNAVAPGPIYTPLVS 231
>SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 339
Score = 44.0 bits (99), Expect = 2e-05
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Frame = +1
Query: 46 KVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGQSLQAELNSKYGN-KTKFYRSD 222
KV +TG++ GIG L +G K + + EE Q + +++ + + K +F R D
Sbjct: 43 KVALVTGSSGGIGYVTALELARKGAK-VYLAGRNEEKYQKVMKQIHDEVRHSKIRFLRLD 101
Query: 223 VTDEEHFLGILNAVVQEQGGIDVVINNAALMNDSIGIYKKAIEVNV 360
+ D E + + ++ + +++NNA +MN + K E+ +
Sbjct: 102 LLDFESVYQAAESFIAKEEKLHILVNNAGIMNPPFELTKDGYELQI 147
>SPAC23D3.11 |ayr1||1-acyldihydroxyacetone phosphate reductase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 40.3 bits (90), Expect = 3e-04
Identities = 54/204 (26%), Positives = 90/204 (44%), Gaps = 8/204 (3%)
Frame = +1
Query: 43 DKVVFITGAATG-IGESVVRILLDEGVKHIAILDIAEEAGQSLQAELNSKYGNKTKFYRS 219
+K V ITG + G IG ++ EG + +A E +A L + +
Sbjct: 4 EKFVLITGCSEGGIGNALALKFHQEGFQVLATARQVERMDNLTKAGLQT--------LKL 55
Query: 220 DVTDEEHFLGILNAVVQ-EQGGIDVVINNAALMNDSIGI------YKKAIEVNVTALITS 378
DVTDE+ + V + G + +INNA + I K ++VN +I
Sbjct: 56 DVTDEDSVREVEQEVRKFTNGSLHYLINNAGAPCSAPAIDLDIEDVSKVMDVNFYGVIRM 115
Query: 379 TLKAIEIMGKHSGGKGGTVINVSSVAALTQSHVMPIYFATKSAVLQFSNCIGRPEHFSKT 558
KA + + G T++NV+S+ + Y A+K+A+L +SN + R E +
Sbjct: 116 N-KAFQHQLIRAKG---TIVNVNSLVSYVPFAFNAAYNASKAALLAYSNTL-RIE-LAPF 169
Query: 559 GVRVLTVCFGATDTALLTDEKLGT 630
GV+V ++ G T + + LGT
Sbjct: 170 GVQVTSIMTGGVQTK-IQSKPLGT 192
>SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 236
Score = 39.1 bits (87), Expect = 6e-04
Identities = 43/196 (21%), Positives = 88/196 (44%), Gaps = 7/196 (3%)
Frame = +1
Query: 52 VFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGQSLQAELNSKYGNKTKFYRSDVTD 231
V ITG ++G+G+ + +I +G + I L+ L S K + + + D
Sbjct: 4 VLITGGSSGLGKRIAQIWSQKGHQ----CHIVGRNEFHLKETLQSLSVAKGQQHTLTIAD 59
Query: 232 EEHFLGILNAVVQEQGGIDVVINNAALMNDSIGIYKKAIEVN-------VTALITSTLKA 390
+ + L ++ E ID V++ A ++ S+ + E++ V+A+ S +
Sbjct: 60 VQSDMKNLKSIF-ESVEIDTVVHAAGVLQSSLCVRTSEKEIDSIICTNLVSAIKLSKMAI 118
Query: 391 IEIMGKHSGGKGGTVINVSSVAALTQSHVMPIYFATKSAVLQFSNCIGRPEHFSKTGVRV 570
+E + + ++N+SS + +Y A+K+ + F+ + E SK G+RV
Sbjct: 119 LEWFRNKNSERDRLILNISSRLSTYALPGTSVYAASKAGLESFTKVLA-AEVASK-GIRV 176
Query: 571 LTVCFGATDTALLTDE 618
+ G DT +L+ +
Sbjct: 177 NAISPGYVDTPMLSSQ 192
>SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 247
Score = 37.5 bits (83), Expect = 0.002
Identities = 38/174 (21%), Positives = 79/174 (45%), Gaps = 4/174 (2%)
Frame = +1
Query: 34 EWKDKVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGQSLQAELNSKY----GNK 201
E +KV+ +TG++ GIG + L + K IA+ ++L + + G+
Sbjct: 3 ETAEKVILLTGSSKGIGLATAE-ALQKKAKVIAVSRSLTPELETLLIQNPDSFVHVKGDV 61
Query: 202 TKFYRSDVTDEEHFLGILNAVVQEQGGIDVVINNAALMNDSIGIYKKAIEVNVTALITST 381
T+ ++ + G L++V+ G ++ + A + + I ++K ++N +++ +
Sbjct: 62 TEVGKASIETAIKKFGKLDSVILNAGVLEPI---AKIADADINEWRKLFDINFFSVVETV 118
Query: 382 LKAIEIMGKHSGGKGGTVINVSSVAALTQSHVMPIYFATKSAVLQFSNCIGRPE 543
AI + K GT++ VSS AA+ Y +K+A+ +G E
Sbjct: 119 KYAIPHLRKTK----GTIVIVSSGAAVRVFPAWAAYCCSKAAINMLVMNLGSEE 168
>SPBC16H5.14c ||SPBC21H7.08|short chain dehydrogenase DHRS family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 286
Score = 31.5 bits (68), Expect = 0.13
Identities = 38/170 (22%), Positives = 77/170 (45%), Gaps = 6/170 (3%)
Frame = +1
Query: 22 KMSHEWKDKVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGQSLQAELNSKYGNK 201
K S+ ++ ITG + +G ++++ LD G +A LD E A LQ Y +K
Sbjct: 28 KQSYSCAKGLIVITGGSGILGHAIIQEALDRGFS-VASLDSTEPA-SFLQ------YNSK 79
Query: 202 TKFYRSDVTDEEHFLGILNAVVQEQGGIDVVINNAAL--MNDSIGI----YKKAIEVNVT 363
+ ++T ++ G ++++ + +IN AA+ N + I +K E NV
Sbjct: 80 FSALKCNITKDKDVEGCVHSLKKMNRTPFALINAAAIAPKNHLLSISRQELQKCFETNVI 139
Query: 364 ALITSTLKAIEIMGKHSGGKGGTVINVSSVAALTQSHVMPIYFATKSAVL 513
+ T ++ + V+N++S A + + Y ++K+A++
Sbjct: 140 GQLAITSALFPLLLQDPNPH---VVNIASSLAYFSAMGVGAYSSSKAALV 186
>SPBC2A9.02 |||NAD dependent epimerase/dehydratase family
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 295
Score = 31.1 bits (67), Expect = 0.17
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = +1
Query: 52 VFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGQSLQAELNSKY 192
+F+TGAA IG +VR LL+ G + + ++ +EE L+A + Y
Sbjct: 3 IFVTGAAGFIGSEIVRQLLEAGHEVVGLVR-SEENAAKLRAAGGTPY 48
>SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 236
Score = 29.5 bits (63), Expect = 0.51
Identities = 34/139 (24%), Positives = 57/139 (41%), Gaps = 6/139 (4%)
Frame = +1
Query: 229 DEEHFLGILNAV---VQEQGGIDVVINNA--ALMNDSIGIYKKAIEVNVTALITSTLKAI 393
D +F I +V + G IDV++NNA ++ + ++ I + L+ I
Sbjct: 22 DVNNFSSIKKSVEKAISHFGRIDVLLNNAGYSVYSPLESTTEEQIHNIFNTNVFGALEVI 81
Query: 394 E-IMGKHSGGKGGTVINVSSVAALTQSHVMPIYFATKSAVLQFSNCIGRPEHFSKTGVRV 570
+ I G +INVSS+ + +Y+ TK A+ S + GV+V
Sbjct: 82 KAITPIFRSQHNGMIINVSSIGGKMTFPLGCLYYGTKYAIEGISEAL--TWEMQSIGVKV 139
Query: 571 LTVCFGATDTALLTDEKLG 627
+ G T T +E G
Sbjct: 140 KIIEPGFTATEFRVEEGAG 158
>SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 236
Score = 29.5 bits (63), Expect = 0.51
Identities = 34/139 (24%), Positives = 57/139 (41%), Gaps = 6/139 (4%)
Frame = +1
Query: 229 DEEHFLGILNAV---VQEQGGIDVVINNA--ALMNDSIGIYKKAIEVNVTALITSTLKAI 393
D +F I +V + G IDV++NNA ++ + ++ I + L+ I
Sbjct: 22 DVNNFSSIKKSVEKAISHFGRIDVLLNNAGYSVYSPLESTTEEQIHNIFNTNVFGALEVI 81
Query: 394 E-IMGKHSGGKGGTVINVSSVAALTQSHVMPIYFATKSAVLQFSNCIGRPEHFSKTGVRV 570
+ I G +INVSS+ + +Y+ TK A+ S + GV+V
Sbjct: 82 KAITPIFRSQHNGMIINVSSIGGKMTFPLGCLYYGTKYAIEGISEAL--TWEMQSIGVKV 139
Query: 571 LTVCFGATDTALLTDEKLG 627
+ G T T +E G
Sbjct: 140 KIIEPGFTATEFRVEEGAG 158
>SPAP7G5.04c |lys1||aminoadipate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1419
Score = 29.1 bits (62), Expect = 0.67
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 9/148 (6%)
Frame = +1
Query: 46 KVVFITGAATGIGESVVRILL--DEGVKHIAILDI-AEEAGQSLQAELNSKYGNKTKFYR 216
K VF+TGA +G ++R L+ +K IA++ +EE G + + YG + +
Sbjct: 1005 KTVFLTGANGYLGVFILRDLMTRSSNLKVIALVRASSEEHGLKRLKDSCTAYGVWDESWA 1064
Query: 217 SDVTDEEHFLGILNAVVQEQGG------IDVVINNAALMNDSIGIYKKAIEVNVTALITS 378
++ L + N ++E+ +D VI+N AL++ + Y K NV IT+
Sbjct: 1065 QKISVVNGDLALENWGIEERKWNKLTEVVDYVIHNGALVH-WVYPYSKLRGPNVMGTITA 1123
Query: 379 TLKAIEIMGKHSGGKGGTVINVSSVAAL 462
LK + GKG ++ VSS + +
Sbjct: 1124 -LKLCSL------GKGKSLSFVSSTSTV 1144
>SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 397
Score = 27.1 bits (57), Expect = 2.7
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 49 VVFITGAATGIGESVVRILLDEGVKHIAIL 138
VV +TG ++GIG+ VV L G + + +L
Sbjct: 77 VVMVTGGSSGIGQVVVEKLASLGAQVVILL 106
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 27.1 bits (57), Expect = 2.7
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +1
Query: 229 DEEHFLGILNAVVQEQGGIDVVINNAALMNDSIGIYKKA 345
+ EH L L+ +D +NN + +S+ I+KKA
Sbjct: 1139 ESEHLLNELDDTHSSLSTVDFTVNNTESLINSLKIFKKA 1177
>SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1076
Score = 26.6 bits (56), Expect = 3.6
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 9/57 (15%)
Frame = -2
Query: 552 RKVFRSTDTITELQHSAFSCEVYWHNVRLRQ--------SGNRRN-VDNCTSFTTAV 409
R R++ T+TE Q+ + + W+ LRQ +G+ ++ +D C FT A+
Sbjct: 164 RLQLRTSQTMTEPQYDSMHTQFMWNEFMLRQLIKFRSHLNGDEKSALDGCRFFTCAI 220
>SPBC16H5.03c |fub2|uba2|SUMO E1-like activator enzyme
Fub2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 628
Score = 26.6 bits (56), Expect = 3.6
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1
Query: 37 WKDKVVFITGAATGIGESVVRILLDEGVKHIAILDI 144
+K V + GA GIG +++ LL GVK + I+D+
Sbjct: 23 FKSAKVLLVGAG-GIGCELLKNLLMSGVKEVHIIDL 57
>SPAC890.07c |rmt1|prmt1|type I protein arginine N-methyltransferase
Rmt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 339
Score = 26.2 bits (55), Expect = 4.7
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 31 HEWKDKVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGQSLQ-AELN 183
H ++DK+V G TGI + G KH+ +D++E +++Q E+N
Sbjct: 51 HLFRDKIVLDVGCGTGI---LSMFCARAGAKHVYGVDMSEIIHKAVQIVEVN 99
>SPAC3F10.04 |gsa1|gsh2|glutathione synthetase large subunit
Gsa1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 498
Score = 26.2 bits (55), Expect = 4.7
Identities = 21/98 (21%), Positives = 38/98 (38%), Gaps = 6/98 (6%)
Frame = +1
Query: 211 YRSD--VTDEEHFLGI----LNAVVQEQGGIDVVINNAALMNDSIGIYKKAIEVNVTALI 372
+RSD V ++ F+G N + GG+ ++N G+Y+K + N +
Sbjct: 127 FRSDYMVHQDDSFIGCKQVEFNTISVSFGGVSKAVSNLHAYCSQSGLYRKPLTTNYLTVN 186
Query: 373 TSTLKAIEIMGKHSGGKGGTVINVSSVAALTQSHVMPI 486
TS + V N++S + + PI
Sbjct: 187 TSVSGICTGISNAVDAYRDYVKNITSKMNIASDNTKPI 224
>SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory
subunit Ekc1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 838
Score = 25.8 bits (54), Expect = 6.2
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 122 LTPSSNNILTTDSPMPVAAPV 60
+T + N+ TTDSPM A PV
Sbjct: 447 ITKDNLNLTTTDSPMSEAEPV 467
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.374
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,925,488
Number of Sequences: 5004
Number of extensions: 59156
Number of successful extensions: 205
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 195
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 337208592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -