Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt19d07
(730 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 25 0.55
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 25 0.55
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 23 3.9
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 22 5.2
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 22 5.2
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 22 5.2
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 22 5.2
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 22 5.2
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 22 5.2
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 22 5.2
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 22 5.2
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 22 5.2
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 22 5.2
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 25.4 bits (53), Expect = 0.55
Identities = 12/42 (28%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = -2
Query: 714 GYTGNSTDRQHMPSTNIPGSQHVDHRGFTDIWNSN--YHNII 595
G + + T+R+ T I S + +++ + + +NS Y+NII
Sbjct: 287 GRSRDRTERERSKETKIISSNNYNYKNYNNNYNSKKLYYNII 328
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 25.4 bits (53), Expect = 0.55
Identities = 12/42 (28%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = -2
Query: 714 GYTGNSTDRQHMPSTNIPGSQHVDHRGFTDIWNSN--YHNII 595
G + + T+R+ T I S + +++ + + +NS Y+NII
Sbjct: 298 GRSRDRTERERSKETKIISSNNYNYKNYNNNYNSKKLYYNII 339
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 22.6 bits (46), Expect = 3.9
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +1
Query: 559 NSNRYNRSEELEYNVMII 612
N+N YN ++L YN++ I
Sbjct: 342 NNNNYNNYKKLYYNIINI 359
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 559 NSNRYNRSEELEYNVMII 612
N+N YN ++L YN+ I
Sbjct: 99 NNNNYNNYKKLYYNINYI 116
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 22.2 bits (45), Expect = 5.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 559 NSNRYNRSEELEYNVMII 612
N+N YN ++L YN+ I
Sbjct: 99 NNNNYNNYKKLYYNINYI 116
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 559 NSNRYNRSEELEYNVMII 612
N+N YN ++L YN+ I
Sbjct: 99 NNNNYNNYKKLYYNINYI 116
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 559 NSNRYNRSEELEYNVMII 612
N+N YN ++L YN+ I
Sbjct: 99 NNNNYNNYKKLYYNINYI 116
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 559 NSNRYNRSEELEYNVMII 612
N+N YN ++L YN+ I
Sbjct: 99 NNNNYNNYKKLYYNINYI 116
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 559 NSNRYNRSEELEYNVMII 612
N+N YN ++L YN+ I
Sbjct: 99 NNNNYNNYKKLYYNINYI 116
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 559 NSNRYNRSEELEYNVMII 612
N+N YN ++L YN+ I
Sbjct: 99 NNNNYNNYKKLYYNINYI 116
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 559 NSNRYNRSEELEYNVMII 612
N+N YN ++L YN+ I
Sbjct: 99 NNNNYNNYKKLYYNINYI 116
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 559 NSNRYNRSEELEYNVMII 612
N+N YN ++L YN+ I
Sbjct: 97 NNNNYNNYKKLYYNINYI 114
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 22.2 bits (45), Expect = 5.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 559 NSNRYNRSEELEYNVMII 612
N+N YN ++L YN+ I
Sbjct: 107 NNNNYNNYKKLYYNINYI 124
Score = 21.4 bits (43), Expect = 9.0
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +1
Query: 523 KTIKPLMVDLIKNSNRYNRSEELEYN 600
K I L I N+N YN + YN
Sbjct: 80 KIISSLSNKTIHNNNNYNNNNYNNYN 105
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,463
Number of Sequences: 438
Number of extensions: 4199
Number of successful extensions: 19
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -