Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt19d05
         (769 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81474-7|CAH60750.1|  305|Caenorhabditis elegans Hypothetical pr...    30   1.6  
AF025465-9|AAB71020.2|  136|Caenorhabditis elegans Hypothetical ...    29   2.8  
Z81479-2|CAB03941.1|  283|Caenorhabditis elegans Hypothetical pr...    28   8.4  

>Z81474-7|CAH60750.1|  305|Caenorhabditis elegans Hypothetical
           protein C18D4.5 protein.
          Length = 305

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = +2

Query: 611 WHDFYCRYRKFVFVNYYSRMIILYFSINLL-TFC 709
           WH     Y   +FV ++SR+ I++F+I LL +FC
Sbjct: 162 WHFTSSEYYDHMFVVWFSRLSIIWFAIVLLASFC 195


>AF025465-9|AAB71020.2|  136|Caenorhabditis elegans Hypothetical
           protein K02E7.11 protein.
          Length = 136

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
 Frame = +2

Query: 620 FYCRYRKFVFVNYYSRMIILYFSINLLT--FCISDCNKINF 736
           F+  +   +   Y+ ++IIL  SIN++T   CI  CN +NF
Sbjct: 84  FHIYFNSVITFIYFCKLIILLVSINMVTSILCIV-CNFVNF 123


>Z81479-2|CAB03941.1|  283|Caenorhabditis elegans Hypothetical
           protein C34F6.2 protein.
          Length = 283

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -1

Query: 499 VNLLCSQQVSCHFGLCDSINFMKSTSLDGRRD 404
           V LLC    + H GL D + F KS ++D R +
Sbjct: 35  VPLLCLHMQTVHSGLSDELLFCKSKNVDMRSE 66


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,580,623
Number of Sequences: 27780
Number of extensions: 305221
Number of successful extensions: 713
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 713
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)