Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt19c19
         (739 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    25   0.64 
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    25   0.64 
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    24   1.5  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    22   4.5  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    22   4.5  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   4.5  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    22   4.5  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          22   4.5  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    22   4.5  
AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical pro...    22   5.9  

>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 25.0 bits (52), Expect = 0.64
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = +1

Query: 373 LRMSGNNAKEPPLQTMTGLPPNHNPWMYGVF 465
           ++   N  ++PP  T   LP    PWM   F
Sbjct: 210 IQQQPNQGQQPPGNTAAALPSPLYPWMRSQF 240


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 25.0 bits (52), Expect = 0.64
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = +1

Query: 373 LRMSGNNAKEPPLQTMTGLPPNHNPWMYGVF 465
           ++   N  ++PP  T   LP    PWM   F
Sbjct: 212 IQQQPNQGQQPPGNTAAALPSPLYPWMRSQF 242


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
 Frame = +2

Query: 224 FFVVAIL--FL*EIVAVTKIFTQESIRGIRTSHRNVIACRNTLQ*LVYLF-SC*GCLAIM 394
           F + A+L   L +   VT + T +         ++V A    L   V LF S  G L ++
Sbjct: 159 FLIYAVLEMLLQKYKTVTYVMTGQLKAQNSNLLKSVCADLCLLSECVDLFNSLFGFLVLL 218

Query: 395 LRSLHCKQ*LVYLQIIIHG 451
           L +L   Q L+Y+Q+I+ G
Sbjct: 219 LVALTTLQLLIYIQVIVIG 237


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +1

Query: 439 HNPWMYGVFHH 471
           H  W+YG+F H
Sbjct: 98  HCDWLYGIFGH 108


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -1

Query: 328 NYVPVRSSYSPYRFLCENLSYGHYF 254
           N  P    + P RFL EN+   H F
Sbjct: 399 NVFPDPEKFDPDRFLPENIQKRHPF 423


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -3

Query: 482 LLYG**KTPYIHGL*FGGKPVIVCS 408
           L+YG  K+  I G+ FG   VI+C+
Sbjct: 263 LVYGMSKSRNIEGVSFGTNLVILCA 287


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = +1

Query: 448 WMYGVFHHPYNNYHGGMYAPYY 513
           + Y   +  YNNY  G    YY
Sbjct: 215 YQYNQAYSNYNNYQEGFSCQYY 236


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = +1

Query: 448 WMYGVFHHPYNNYHGGMYAPYY 513
           + Y   +  YNNY  G    YY
Sbjct: 235 YQYNQAYSNYNNYQEGFSCQYY 256


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -1

Query: 328 NYVPVRSSYSPYRFLCENLSYGHYF 254
           N  P    + P RFL EN+   H F
Sbjct: 399 NVFPDPEKFDPDRFLPENIQKRHPF 423


>AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical
           protein protein.
          Length = 102

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -1

Query: 166 ITINGGRSNCTHISRFFT*FYT 101
           I I+ GR+N ++ S+F    YT
Sbjct: 7   IPISSGRTNGSNFSKFINCHYT 28


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,967
Number of Sequences: 336
Number of extensions: 4244
Number of successful extensions: 19
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)