Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt19c19
         (739 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    25   3.2  
AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    23   7.4  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    23   7.4  
AF437885-1|AAL84180.1|  157|Anopheles gambiae odorant binding pr...    23   9.8  

>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = -2

Query: 222 VDCYIRLGC 196
           +DCY+RLGC
Sbjct: 530 IDCYLRLGC 538


>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 12/47 (25%), Positives = 26/47 (55%)
 Frame = +1

Query: 586 MNQASNPPPLLRAPRPGVNRPFPNQNPIKFNLNNVRKAAPLSQSENP 726
           M +A++ P  +   RP + +P P   P++F+ + +R+   L  ++ P
Sbjct: 109 MTKATSLPLGVPPFRP-IPKPTPEAEPVRFDPSVLRRNFALKTAQTP 154


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 12/47 (25%), Positives = 26/47 (55%)
 Frame = +1

Query: 586 MNQASNPPPLLRAPRPGVNRPFPNQNPIKFNLNNVRKAAPLSQSENP 726
           M +A++ P  +   RP + +P P   P++F+ + +R+   L  ++ P
Sbjct: 114 MTKATSLPLGVPPFRP-IPKPTPEAEPVRFDPSVLRRNFALKTAQTP 159


>AF437885-1|AAL84180.1|  157|Anopheles gambiae odorant binding
           protein protein.
          Length = 157

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +3

Query: 603 STTFTQSPTPGRKPPFPKSE 662
           STT TQ P P R   +P  E
Sbjct: 26  STTTTQRPAPRRDGQYPPPE 45


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 765,169
Number of Sequences: 2352
Number of extensions: 16812
Number of successful extensions: 20
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75676146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)