Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt19b18
(757 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY113353-1|AAM29358.1| 211|Drosophila melanogaster GH28782p pro... 122 7e-28
AE014297-2344|AAN13741.1| 211|Drosophila melanogaster CG5413-PB... 122 7e-28
AE014297-2343|AAF55414.1| 211|Drosophila melanogaster CG5413-PA... 122 7e-28
AF084522-1|AAC34860.1| 211|Drosophila melanogaster cellular rep... 119 5e-27
BT001520-1|AAN71275.1| 177|Drosophila melanogaster LP11958p pro... 84 2e-16
AE014297-2345|AAN13742.1| 173|Drosophila melanogaster CG5413-PC... 84 2e-16
AY119245-1|AAM51105.1| 486|Drosophila melanogaster SD20456p pro... 30 3.9
AE014296-2200|AAN11862.1| 518|Drosophila melanogaster CG32108-P... 29 9.1
>AY113353-1|AAM29358.1| 211|Drosophila melanogaster GH28782p
protein.
Length = 211
Score = 122 bits (293), Expect = 7e-28
Identities = 60/188 (31%), Positives = 105/188 (55%), Gaps = 1/188 (0%)
Frame = +2
Query: 128 WQSRDSANEITSRRRSDPPDHTKLIAMARYVLHSADWASLATISNLPAIEGFPFTNVKSV 307
+ R I +R +H K+ AR ++H A+WA++ ++S ++G+P N+ S+
Sbjct: 24 YSRRKDERIIREYKREQELNHAKI---ARDLVHRANWAAVGSLSTNERVKGYPMVNIISI 80
Query: 308 VDGSLAN-STGVPYFYMSPLDFSARDLTKNSRATVLVSLEETKFCDQNNYDPEDPRCTRL 484
D N STG F ++ LDF+ D K+++ T+L S E+T C + DP +P C R
Sbjct: 81 DDSDANNRSTGRIRFLLTDLDFTGPDWQKDNKVTLLFSDEQTLRCKEGGKDPMEPTCARS 140
Query: 485 MLSGKMKKVKEGSDEYKFAKAALFERHPAMANWPTDHDWFIAKMKIALIAMVDWFGGAKY 664
M+SG++KK+ Y+ + A RHPA NW H++++ +++I+ I ++D++GG
Sbjct: 141 MISGQVKKMDPSDKSYQPSLDAYVRRHPAAINWVKAHNFYLCELEISNIFVLDFYGGPHK 200
Query: 665 IPVRDYLA 688
+ DY A
Sbjct: 201 VSASDYYA 208
>AE014297-2344|AAN13741.1| 211|Drosophila melanogaster CG5413-PB,
isoform B protein.
Length = 211
Score = 122 bits (293), Expect = 7e-28
Identities = 60/188 (31%), Positives = 105/188 (55%), Gaps = 1/188 (0%)
Frame = +2
Query: 128 WQSRDSANEITSRRRSDPPDHTKLIAMARYVLHSADWASLATISNLPAIEGFPFTNVKSV 307
+ R I +R +H K+ AR ++H A+WA++ ++S ++G+P N+ S+
Sbjct: 24 YSRRKDERIIREYKREQELNHAKI---ARDLVHRANWAAVGSLSTNERVKGYPMVNIISI 80
Query: 308 VDGSLAN-STGVPYFYMSPLDFSARDLTKNSRATVLVSLEETKFCDQNNYDPEDPRCTRL 484
D N STG F ++ LDF+ D K+++ T+L S E+T C + DP +P C R
Sbjct: 81 DDSDANNRSTGRIRFLLTDLDFTGPDWQKDNKVTLLFSDEQTLRCKEGGKDPMEPTCARS 140
Query: 485 MLSGKMKKVKEGSDEYKFAKAALFERHPAMANWPTDHDWFIAKMKIALIAMVDWFGGAKY 664
M+SG++KK+ Y+ + A RHPA NW H++++ +++I+ I ++D++GG
Sbjct: 141 MISGQVKKMDPSDKSYQPSLDAYVRRHPAAINWVKAHNFYLCELEISNIFVLDFYGGPHK 200
Query: 665 IPVRDYLA 688
+ DY A
Sbjct: 201 VSASDYYA 208
>AE014297-2343|AAF55414.1| 211|Drosophila melanogaster CG5413-PA,
isoform A protein.
Length = 211
Score = 122 bits (293), Expect = 7e-28
Identities = 60/188 (31%), Positives = 105/188 (55%), Gaps = 1/188 (0%)
Frame = +2
Query: 128 WQSRDSANEITSRRRSDPPDHTKLIAMARYVLHSADWASLATISNLPAIEGFPFTNVKSV 307
+ R I +R +H K+ AR ++H A+WA++ ++S ++G+P N+ S+
Sbjct: 24 YSRRKDERIIREYKREQELNHAKI---ARDLVHRANWAAVGSLSTNERVKGYPMVNIISI 80
Query: 308 VDGSLAN-STGVPYFYMSPLDFSARDLTKNSRATVLVSLEETKFCDQNNYDPEDPRCTRL 484
D N STG F ++ LDF+ D K+++ T+L S E+T C + DP +P C R
Sbjct: 81 DDSDANNRSTGRIRFLLTDLDFTGPDWQKDNKVTLLFSDEQTLRCKEGGKDPMEPTCARS 140
Query: 485 MLSGKMKKVKEGSDEYKFAKAALFERHPAMANWPTDHDWFIAKMKIALIAMVDWFGGAKY 664
M+SG++KK+ Y+ + A RHPA NW H++++ +++I+ I ++D++GG
Sbjct: 141 MISGQVKKMDPSDKSYQPSLDAYVRRHPAAINWVKAHNFYLCELEISNIFVLDFYGGPHK 200
Query: 665 IPVRDYLA 688
+ DY A
Sbjct: 201 VSASDYYA 208
>AF084522-1|AAC34860.1| 211|Drosophila melanogaster cellular
repressor of E1A-stimulatedgenes CREG protein.
Length = 211
Score = 119 bits (286), Expect = 5e-27
Identities = 60/188 (31%), Positives = 103/188 (54%), Gaps = 1/188 (0%)
Frame = +2
Query: 128 WQSRDSANEITSRRRSDPPDHTKLIAMARYVLHSADWASLATISNLPAIEGFPFTNVKSV 307
+ R I +R +H K+ AR ++H A+WA++ ++S ++G+P N+ S
Sbjct: 24 YSRRKDERIIREYKREQELNHAKI---ARDLVHRANWAAVGSLSTNERVKGYPMVNIISF 80
Query: 308 VDGSLAN-STGVPYFYMSPLDFSARDLTKNSRATVLVSLEETKFCDQNNYDPEDPRCTRL 484
D N STG F ++ LDF+ D K+++ T+L S E+T C + DP +P C R
Sbjct: 81 DDSDANNRSTGRIRFLLTDLDFTGPDWQKDNKVTLLFSDEQTLRCKEGGKDPMEPTCARS 140
Query: 485 MLSGKMKKVKEGSDEYKFAKAALFERHPAMANWPTDHDWFIAKMKIALIAMVDWFGGAKY 664
M+SG++KK+ Y+ + A RHPA NW H++++ +++I+ I + D++GG
Sbjct: 141 MISGQVKKMDPSDKSYQPSLDAYVRRHPAAINWVKAHNFYLCELEISNIFVPDFYGGPHK 200
Query: 665 IPVRDYLA 688
+ DY A
Sbjct: 201 VSASDYYA 208
>BT001520-1|AAN71275.1| 177|Drosophila melanogaster LP11958p
protein.
Length = 177
Score = 84.2 bits (199), Expect = 2e-16
Identities = 43/129 (33%), Positives = 73/129 (56%), Gaps = 1/129 (0%)
Frame = +2
Query: 128 WQSRDSANEITSRRRSDPPDHTKLIAMARYVLHSADWASLATISNLPAIEGFPFTNVKSV 307
+ R I +R +H K+ AR ++H A+WA++ ++S ++G+P N+ S+
Sbjct: 28 YSRRKDERIIREYKREQELNHAKI---ARDLVHRANWAAVGSLSTNERVKGYPMVNIISI 84
Query: 308 VDGSLAN-STGVPYFYMSPLDFSARDLTKNSRATVLVSLEETKFCDQNNYDPEDPRCTRL 484
D N STG F ++ LDF+ D K+++ T+L S E+T C + DP +P C R
Sbjct: 85 DDSDANNRSTGRIRFLLTDLDFTGPDWQKDNKVTLLFSDEQTLRCKEGGKDPMEPTCARS 144
Query: 485 MLSGKMKKV 511
M+SG++KK+
Sbjct: 145 MISGQVKKL 153
>AE014297-2345|AAN13742.1| 173|Drosophila melanogaster CG5413-PC,
isoform C protein.
Length = 173
Score = 84.2 bits (199), Expect = 2e-16
Identities = 43/129 (33%), Positives = 73/129 (56%), Gaps = 1/129 (0%)
Frame = +2
Query: 128 WQSRDSANEITSRRRSDPPDHTKLIAMARYVLHSADWASLATISNLPAIEGFPFTNVKSV 307
+ R I +R +H K+ AR ++H A+WA++ ++S ++G+P N+ S+
Sbjct: 24 YSRRKDERIIREYKREQELNHAKI---ARDLVHRANWAAVGSLSTNERVKGYPMVNIISI 80
Query: 308 VDGSLAN-STGVPYFYMSPLDFSARDLTKNSRATVLVSLEETKFCDQNNYDPEDPRCTRL 484
D N STG F ++ LDF+ D K+++ T+L S E+T C + DP +P C R
Sbjct: 81 DDSDANNRSTGRIRFLLTDLDFTGPDWQKDNKVTLLFSDEQTLRCKEGGKDPMEPTCARS 140
Query: 485 MLSGKMKKV 511
M+SG++KK+
Sbjct: 141 MISGQVKKL 149
>AY119245-1|AAM51105.1| 486|Drosophila melanogaster SD20456p
protein.
Length = 486
Score = 29.9 bits (64), Expect = 3.9
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +2
Query: 317 SLANSTGVPYFYMSPLDFSARDLTKNSRATVLVSLEE--TKFCDQNNYDPEDPRCTRLML 490
++ANS + Y PL+ S ++ +N+ V++ L+ T D NN P +CT++
Sbjct: 140 AVANSLSSVHIYALPLELSNDEIDENADEKVVIQLDSLITLTLDINN--PVQDQCTKICW 197
Query: 491 S 493
S
Sbjct: 198 S 198
>AE014296-2200|AAN11862.1| 518|Drosophila melanogaster CG32108-PA
protein.
Length = 518
Score = 28.7 bits (61), Expect = 9.1
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +2
Query: 317 SLANSTGVPYFYMSPLDFSARDLTKNSRATVLVSLEE--TKFCDQNNYDPEDPRCTRLML 490
++ANS + Y PL+ + ++ +N+ V++ L+ T D NN P +CT++
Sbjct: 172 AVANSLSSVHIYALPLELANDEIDENADEKVVIQLDSLITLTLDINN--PVQDQCTKICW 229
Query: 491 S 493
S
Sbjct: 230 S 230
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,624,820
Number of Sequences: 53049
Number of extensions: 744285
Number of successful extensions: 1983
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1977
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3458330568
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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