Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt19b12
         (320 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    21   3.7  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     20   8.4  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               20   8.4  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    20   8.4  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +3

Query: 132 VMRKFPANVLRCNQWINIVRRQR 200
           V+  FPA  +  + +I ++RRQR
Sbjct: 173 VLGFFPALNIVADSFIELIRRQR 195


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 19.8 bits (39), Expect = 8.4
 Identities = 6/14 (42%), Positives = 8/14 (57%)
 Frame = +3

Query: 174 WINIVRRQRHEEDW 215
           WI+ +  Q  EE W
Sbjct: 356 WIDAIMTQLREEGW 369


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 19.8 bits (39), Expect = 8.4
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 93 FLQCRLTQDGILKK 52
          +L+C +T+ GIL K
Sbjct: 58 YLKCFMTKHGILDK 71


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 19.8 bits (39), Expect = 8.4
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 195 VYVQYLSIGYILIHL 151
           V V  L  GY+LIH+
Sbjct: 58  VLVILLRAGYVLIHI 72


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,987
Number of Sequences: 438
Number of extensions: 1551
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6968808
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)