Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt19b06
(765 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006625-5|AAK68275.1| 427|Caenorhabditis elegans Acyl coa dehy... 236 1e-62
AF039038-2|AAK21433.1| 419|Caenorhabditis elegans Hypothetical ... 231 5e-61
U41279-10|AAK31426.2| 308|Caenorhabditis elegans Hypothetical p... 200 7e-52
U97403-10|AAB52476.3| 319|Caenorhabditis elegans Hypothetical p... 198 5e-51
AC006625-6|AAN84837.1| 252|Caenorhabditis elegans Acyl coa dehy... 190 1e-48
AF127558-1|AAD21088.1| 419|Caenorhabditis elegans isovaleryl-Co... 157 8e-39
AF038605-3|AAB92016.1| 419|Caenorhabditis elegans Hypothetical ... 157 8e-39
U42838-2|AAB52493.1| 417|Caenorhabditis elegans Hypothetical pr... 106 1e-23
U43283-1|AAC69025.1| 412|Caenorhabditis elegans Hypothetical pr... 102 2e-22
AC006632-9|AAK85472.1| 409|Caenorhabditis elegans Hypothetical ... 98 5e-21
U29377-4|AAA68712.1| 412|Caenorhabditis elegans Hypothetical pr... 97 1e-20
U28943-3|AAT81203.1| 408|Caenorhabditis elegans Hypothetical pr... 97 2e-20
U28943-2|AAA68357.1| 613|Caenorhabditis elegans Hypothetical pr... 97 2e-20
L16622-6|AAA27913.2| 408|Caenorhabditis elegans Hypothetical pr... 89 2e-18
U97194-5|AAB52448.1| 442|Caenorhabditis elegans Hypothetical pr... 85 4e-17
Z66513-4|CAA91333.1| 409|Caenorhabditis elegans Hypothetical pr... 85 5e-17
U41279-9|AAL02437.1| 220|Caenorhabditis elegans Hypothetical pr... 82 4e-16
U97002-9|AAB52261.2| 985|Caenorhabditis elegans Hypothetical pr... 46 3e-05
U41279-8|AAL02436.1| 307|Caenorhabditis elegans Hypothetical pr... 42 6e-04
U58756-9|AAC48086.1| 667|Caenorhabditis elegans Hypothetical pr... 40 0.003
U40797-10|AAK95871.1| 617|Caenorhabditis elegans Gex interactin... 30 2.1
AF098997-2|AAC68722.2| 796|Caenorhabditis elegans Hypothetical ... 30 2.1
U28941-6|AAC71101.2| 1788|Caenorhabditis elegans Hypothetical pr... 29 3.6
AY314774-1|AAQ84881.1| 1757|Caenorhabditis elegans methuselah-li... 29 3.6
Z75954-6|CAJ55257.1| 1145|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z75954-5|CAB00104.1| 1143|Caenorhabditis elegans Hypothetical pr... 29 4.8
U39854-2|AAA81077.2| 703|Caenorhabditis elegans Puf (pumilio/fb... 29 4.8
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 28 6.3
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 28 6.3
AL132864-2|CAB60592.1| 201|Caenorhabditis elegans Hypothetical ... 28 6.3
>AC006625-5|AAK68275.1| 427|Caenorhabditis elegans Acyl coa
dehydrogenase protein1, isoform a protein.
Length = 427
Score = 236 bits (577), Expect = 1e-62
Identities = 108/221 (48%), Positives = 152/221 (68%)
Frame = +3
Query: 102 ILEQWRSQATAAVGAKTQMKAYSTEVTPRPLTMLTEDELAMRETIRKLATEQISPLVKKM 281
I+ RS + A TP P+ +LTE+EL +T+RK + + + PLV++M
Sbjct: 15 IISTIRSSYSTATAVSISRHCEDFTGTPPPVNLLTENELFFADTVRKFSKDVVKPLVREM 74
Query: 282 EDEHRIDDGIRQMLFDNGLMGIETPVEYSGSGCNFLTMMLVVEELSRVDPAVAAYVDIHN 461
+ ++ + Q +F+NGLMG+ P EY GSG +F M+V+EEL++ DP+V+A V IHN
Sbjct: 75 DKYSKMSPIVTQGVFENGLMGVHVPEEYGGSGSSFFNAMIVIEELAKTDPSVSAMVGIHN 134
Query: 462 TLVNSLFMKLGTEEQKKKYLTKLCTEYAGSFCLTEPSSGSDAFALKTVAKKEGEHYIISG 641
TL S+ + GTEEQK KYL +LC++ SFC++E +GSDAFALKT+AK++G+H++ISG
Sbjct: 135 TLPVSMIIDYGTEEQKLKYLPRLCSDSLASFCISESGAGSDAFALKTIAKRDGDHFLISG 194
Query: 642 SKMWISNSDVAGVFLVMTNADPSKGYKGITCFIVERETPGL 764
+KMWI+NS A VF+V NADPS+ YKGITCFIVER GL
Sbjct: 195 TKMWITNSGEAQVFVVFANADPSQKYKGITCFIVERSADGL 235
>AF039038-2|AAK21433.1| 419|Caenorhabditis elegans Hypothetical
protein K06A5.6 protein.
Length = 419
Score = 231 bits (564), Expect = 5e-61
Identities = 109/216 (50%), Positives = 151/216 (69%)
Frame = +3
Query: 117 RSQATAAVGAKTQMKAYSTEVTPRPLTMLTEDELAMRETIRKLATEQISPLVKKMEDEHR 296
RS A T+ +A+ P PL L+E+E ++ T+R+ A I PLV++M+D+ +
Sbjct: 12 RSAAPVVATMSTKPRAHIDGHVPSPLQQLSEEESSIVGTVRRFAVNVIKPLVREMDDKSQ 71
Query: 297 IDDGIRQMLFDNGLMGIETPVEYSGSGCNFLTMMLVVEELSRVDPAVAAYVDIHNTLVNS 476
+ + F+NGLMGIE P +Y G G +F +LV+EEL++VDP+V+ +VD+ NTLV
Sbjct: 72 MHQSVITGTFENGLMGIEIPEKYGGPGSSFFDAVLVIEELAKVDPSVSVFVDVQNTLVAP 131
Query: 477 LFMKLGTEEQKKKYLTKLCTEYAGSFCLTEPSSGSDAFALKTVAKKEGEHYIISGSKMWI 656
L ++LGTEEQK+KYL K+ TE GSF L+E SGSDAFALKT AKK+G+ ++ISGSKMWI
Sbjct: 132 LIIQLGTEEQKQKYLPKIVTEAIGSFALSETGSGSDAFALKTTAKKDGDDFVISGSKMWI 191
Query: 657 SNSDVAGVFLVMTNADPSKGYKGITCFIVERETPGL 764
+N+ A FLV NAD +KGYKGITCF+V+R G+
Sbjct: 192 TNAGHAQFFLVFANADSAKGYKGITCFLVDRNQEGV 227
>U41279-10|AAK31426.2| 308|Caenorhabditis elegans Hypothetical
protein C17C3.12a protein.
Length = 308
Score = 200 bits (489), Expect = 7e-52
Identities = 96/218 (44%), Positives = 144/218 (66%), Gaps = 2/218 (0%)
Frame = +3
Query: 117 RSQATAAVGAKTQMKAYSTEVTPR--PLTMLTEDELAMRETIRKLATEQISPLVKKMEDE 290
R +A+ + + S + PR PL L E+E + E ++ A + PLV++M+ +
Sbjct: 6 RKLPISAISTFSTTGSISAQQQPRVFPLQHLNENEKKLVEKVKNFAQSSVKPLVREMDRD 65
Query: 291 HRIDDGIRQMLFDNGLMGIETPVEYSGSGCNFLTMMLVVEELSRVDPAVAAYVDIHNTLV 470
RI+ + + FD LMG++ +Y GSG +F ++L VEELS++DPA+A + + N LV
Sbjct: 66 ARINKQLLKKAFDLKLMGLKIDPKYGGSGVSFFELVLAVEELSKIDPAIALIMHLQNALV 125
Query: 471 NSLFMKLGTEEQKKKYLTKLCTEYAGSFCLTEPSSGSDAFALKTVAKKEGEHYIISGSKM 650
L + G EE K+KYL KLC + G+F L+E SGSDAFA++TVAKK+G+H+I++GSK
Sbjct: 126 APLIEEFGNEELKEKYLKKLCKDSVGAFALSEVVSGSDAFAMQTVAKKDGDHFILNGSKW 185
Query: 651 WISNSDVAGVFLVMTNADPSKGYKGITCFIVERETPGL 764
ISN+ +A FLV+ NADP KGY+G+TCFIV+R+ G+
Sbjct: 186 GISNAPIADFFLVLANADPEKGYRGVTCFIVDRDHEGV 223
>U97403-10|AAB52476.3| 319|Caenorhabditis elegans Hypothetical
protein T10E9.9 protein.
Length = 319
Score = 198 bits (482), Expect = 5e-51
Identities = 92/146 (63%), Positives = 111/146 (76%)
Frame = +3
Query: 324 FDNGLMGIETPVEYSGSGCNFLTMMLVVEELSRVDPAVAAYVDIHNTLVNSLFMKLGTEE 503
F+NGLMGIE P +Y G G F LV+EE+S+VD +V A VD+HNTL L ++LGTE+
Sbjct: 16 FENGLMGIEVPEKYGGPGATFFDAALVIEEISKVDASVGAMVDVHNTLFIPLIIELGTEK 75
Query: 504 QKKKYLTKLCTEYAGSFCLTEPSSGSDAFALKTVAKKEGEHYIISGSKMWISNSDVAGVF 683
QK+KYL K T GSF L+E SGSDAFALKT AKK+G+ Y+I+GSKMWISNS+ + F
Sbjct: 76 QKEKYLPKCYTSSVGSFALSETGSGSDAFALKTTAKKDGDDYVINGSKMWISNSEQSETF 135
Query: 684 LVMTNADPSKGYKGITCFIVERETPG 761
LV NADPSKGYKGITCFIVE+ T G
Sbjct: 136 LVFANADPSKGYKGITCFIVEKGTKG 161
>AC006625-6|AAN84837.1| 252|Caenorhabditis elegans Acyl coa
dehydrogenase protein1, isoform b protein.
Length = 252
Score = 190 bits (462), Expect = 1e-48
Identities = 84/142 (59%), Positives = 110/142 (77%)
Frame = +3
Query: 339 MGIETPVEYSGSGCNFLTMMLVVEELSRVDPAVAAYVDIHNTLVNSLFMKLGTEEQKKKY 518
MG+ P EY GSG +F M+V+EEL++ DP+V+A V IHNTL S+ + GTEEQK KY
Sbjct: 1 MGVHVPEEYGGSGSSFFNAMIVIEELAKTDPSVSAMVGIHNTLPVSMIIDYGTEEQKLKY 60
Query: 519 LTKLCTEYAGSFCLTEPSSGSDAFALKTVAKKEGEHYIISGSKMWISNSDVAGVFLVMTN 698
L +LC++ SFC++E +GSDAFALKT+AK++G+H++ISG+KMWI+NS A VF+V N
Sbjct: 61 LPRLCSDSLASFCISESGAGSDAFALKTIAKRDGDHFLISGTKMWITNSGEAQVFVVFAN 120
Query: 699 ADPSKGYKGITCFIVERETPGL 764
ADPS+ YKGITCFIVER GL
Sbjct: 121 ADPSQKYKGITCFIVERSADGL 142
>AF127558-1|AAD21088.1| 419|Caenorhabditis elegans isovaleryl-CoA
dehydrogenase precursorprotein.
Length = 419
Score = 157 bits (381), Expect = 8e-39
Identities = 74/190 (38%), Positives = 122/190 (64%), Gaps = 3/190 (1%)
Frame = +3
Query: 201 LTEDELAMRETIRKLATEQISPLVKKMEDEHRIDD--GIRQMLFDNGLMGIETPVEYSGS 374
L ++E+A+R++IR+ A ++++P K++ ++ D + L D GL+GI P EY GS
Sbjct: 39 LNDEEIALRQSIRQFADKELAPYADKIDKDNGWDQLRPFWKKLGDQGLLGITAPAEYGGS 98
Query: 375 GCNFLTMMLVVEELSRVDPAVAAYVDIHNTLVNSLFMKLGTEEQKKKYLTKLCT-EYAGS 551
G N+ + ++ +EELSR +A H+ L + ++ G+EEQ+KKYL KL + E+ G+
Sbjct: 99 GMNYFSHVIAMEELSRAAGGIALSYGAHSNLCINQIVRNGSEEQRKKYLPKLISGEHMGA 158
Query: 552 FCLTEPSSGSDAFALKTVAKKEGEHYIISGSKMWISNSDVAGVFLVMTNADPSKGYKGIT 731
++E +GSD ++K A+K+G+ Y+++G+K WI+N A V +V DPSK GIT
Sbjct: 159 LAMSEAQAGSDVVSMKLRAEKKGDKYVLNGTKFWITNGPDADVLVVYAKTDPSKHQHGIT 218
Query: 732 CFIVERETPG 761
CF+VE+ TPG
Sbjct: 219 CFLVEKNTPG 228
>AF038605-3|AAB92016.1| 419|Caenorhabditis elegans Hypothetical
protein C02B10.1 protein.
Length = 419
Score = 157 bits (381), Expect = 8e-39
Identities = 74/190 (38%), Positives = 122/190 (64%), Gaps = 3/190 (1%)
Frame = +3
Query: 201 LTEDELAMRETIRKLATEQISPLVKKMEDEHRIDD--GIRQMLFDNGLMGIETPVEYSGS 374
L ++E+A+R++IR+ A ++++P K++ ++ D + L D GL+GI P EY GS
Sbjct: 39 LNDEEIALRQSIRQFADKELAPYADKIDKDNGWDQLRPFWKKLGDQGLLGITAPAEYGGS 98
Query: 375 GCNFLTMMLVVEELSRVDPAVAAYVDIHNTLVNSLFMKLGTEEQKKKYLTKLCT-EYAGS 551
G N+ + ++ +EELSR +A H+ L + ++ G+EEQ+KKYL KL + E+ G+
Sbjct: 99 GMNYFSHVIAMEELSRAAGGIALSYGAHSNLCINQIVRNGSEEQRKKYLPKLISGEHMGA 158
Query: 552 FCLTEPSSGSDAFALKTVAKKEGEHYIISGSKMWISNSDVAGVFLVMTNADPSKGYKGIT 731
++E +GSD ++K A+K+G+ Y+++G+K WI+N A V +V DPSK GIT
Sbjct: 159 LAMSEAQAGSDVVSMKLRAEKKGDKYVLNGTKFWITNGPDADVLVVYAKTDPSKHQHGIT 218
Query: 732 CFIVERETPG 761
CF+VE+ TPG
Sbjct: 219 CFLVEKNTPG 228
>U42838-2|AAB52493.1| 417|Caenorhabditis elegans Hypothetical
protein T08G2.3 protein.
Length = 417
Score = 106 bits (255), Expect = 1e-23
Identities = 63/192 (32%), Positives = 99/192 (51%), Gaps = 4/192 (2%)
Frame = +3
Query: 201 LTEDELAMRETIRKLATEQISPLVKKMEDEHRIDDGIRQMLFDNGLMGIETPVEYSGSGC 380
L+E + +++ K + + + P K ++ I + GLM + P +Y G G
Sbjct: 31 LSETQKEIQDAALKFSKDVLVPNAAKFDESGEFPWEIVRQAHSLGLMNPQIPEKYGGPGM 90
Query: 381 NFLTMMLVVEELSRVDPAVAAYVDIHNTLVNSLFMKLGTEEQKKKYLTKLCTE-YAGSFC 557
L L+VE LS + + + + +++ G EEQKKKYL L E S+C
Sbjct: 91 TTLETALIVEALSYGCTGIQLGIMGPSLAIAPVYIS-GNEEQKKKYLGALAAEPIIASYC 149
Query: 558 LTEPSSGSDAFALKTVAKKEGEHYIISGSKMWISNSDVAGVFLVMTNADP---SKGYKGI 728
+TEP +GSD +KT +K+G+ YII+GSK WI+ A F V+ +DP + K
Sbjct: 150 VTEPGAGSDVNGVKTKCEKKGDEYIINGSKAWITGGGHAKWFFVLARSDPNPKTPAGKAF 209
Query: 729 TCFIVERETPGL 764
T FIV+ +TPG+
Sbjct: 210 TAFIVDGDTPGI 221
>U43283-1|AAC69025.1| 412|Caenorhabditis elegans Hypothetical
protein T25G12.5 protein.
Length = 412
Score = 102 bits (245), Expect = 2e-22
Identities = 54/192 (28%), Positives = 101/192 (52%), Gaps = 4/192 (2%)
Frame = +3
Query: 201 LTEDELAMRETIRKLATEQISPLVKKMEDEHRIDDGIRQMLFDNGLMGIETPVEYSGSGC 380
LT D+ R +RK +++ P+ + + I + G + + P Y G G
Sbjct: 28 LTADQAEFRANVRKFVADEVIPVAGEYDKTMEYPWEIIKKAHAQGYLIADIPEAYGGLGV 87
Query: 381 NFLTMMLVVEELSRVDPAVAAYVDIHNTLVNSLFMKLGTEEQKKKYLTKLCTE-YAGSFC 557
+ ++ ++ EE++ +A + ++ + L + ++ KK++L ++ + S+
Sbjct: 88 DMVSNCIISEEMAYGCSGIATAIMANDLALTPLIL-CANDDIKKRFLGRMIDNPFVASYA 146
Query: 558 LTEPSSGSDAFALKTVAKKEGEHYIISGSKMWISNSDVAGVFLVMTNADP---SKGYKGI 728
+TEP +GSD +KT +K+G+ YI++GSKMWI+N+ A F V+ +DP + K
Sbjct: 147 VTEPGAGSDVAGVKTKCEKKGDEYILNGSKMWITNAGHANWFFVLARSDPDPKTAAGKAF 206
Query: 729 TCFIVERETPGL 764
T F+VE +TPGL
Sbjct: 207 TAFVVEGDTPGL 218
>AC006632-9|AAK85472.1| 409|Caenorhabditis elegans Hypothetical
protein F28A10.6 protein.
Length = 409
Score = 98.3 bits (234), Expect = 5e-21
Identities = 58/194 (29%), Positives = 102/194 (52%), Gaps = 2/194 (1%)
Frame = +3
Query: 186 RPLTMLTEDELAMRETIRKLATEQISPLVKKMEDEHRIDDGIRQMLFDNGLMGIETPVEY 365
RP L D + E + A +++ P + + + + + + + G I ++
Sbjct: 22 RPGVGLERDVEDVLEAAHQFAKKEMYPKMADWDKQGELPMDVLRKAGEMGFGAIYCSGDH 81
Query: 366 SGSGCNFLTMMLVVEELSRVDPAVAAYVDIHNTLVNSLFMKLGTEEQKKKYLTKLCT-EY 542
GSG + L ++ E+LS + AAY+ IHN + + G E+ K+ L + +
Sbjct: 82 GGSGLSRLHASVIFEQLSMGCVSTAAYISIHN-MCAWMLDTYGPEKLKEDLLPDMAVFKK 140
Query: 543 AGSFCLTEPSSGSDAFALKTVAKKEGEHYIISGSKMWISNSDVAGVFLVMTNAD-PSKGY 719
GS+CLTEP +GSDA +++T A K+G++Y+++GSK +IS + + + VM D + G
Sbjct: 141 LGSYCLTEPDAGSDAASIRTTATKKGDYYVVNGSKAFISGAGTSNNYFVMMRQDGAAPGA 200
Query: 720 KGITCFIVERETPG 761
KGI C ++E T G
Sbjct: 201 KGIFCLMIEDGTEG 214
>U29377-4|AAA68712.1| 412|Caenorhabditis elegans Hypothetical
protein K05F1.3 protein.
Length = 412
Score = 97.1 bits (231), Expect = 1e-20
Identities = 63/192 (32%), Positives = 93/192 (48%), Gaps = 4/192 (2%)
Frame = +3
Query: 201 LTEDELAMRETIRKLATEQISPLVKKMEDEHRIDDGIRQMLFDNGLMGIETPVEYSGSGC 380
L++ + ++ K + + + P K + I + G M P +Y G G
Sbjct: 25 LSDTQKEIQSHAIKFSKDVLVPNAAKFDKSGEFPWEIVKQAHSLGFMNTIIPEKYGGPGL 84
Query: 381 NFLTMMLVVEELSRVDPAVAAYVDIHNTLVNSLFMKLGTEEQKKKYLTKLCTE-YAGSFC 557
+ L L+VE LS + + +L + GTEEQKKKYL L E S+C
Sbjct: 85 SNLDTALIVEALSYGCSGLQIAI-FGPSLAAAPICLSGTEEQKKKYLGMLAAEPIIASYC 143
Query: 558 LTEPSSGSDAFALKTVAKKEGEHYIISGSKMWISNSDVAGVFLVMTNAD---PSKGYKGI 728
+TEP +GSD +KT A K+G+ YII+GSK WI+ A F V+ D + K
Sbjct: 144 VTEPGAGSDVNGVKTKAVKQGDEYIINGSKAWITGGGHAKWFFVLARTDDNPKTPAGKAF 203
Query: 729 TCFIVERETPGL 764
T FIV+ +TPG+
Sbjct: 204 TAFIVDGDTPGI 215
>U28943-3|AAT81203.1| 408|Caenorhabditis elegans Hypothetical
protein E04F6.5b protein.
Length = 408
Score = 96.7 bits (230), Expect = 2e-20
Identities = 72/213 (33%), Positives = 104/213 (48%), Gaps = 11/213 (5%)
Frame = +3
Query: 159 KAYSTEVTPRPLTMLTEDE--LAM-RETIRKLATEQISPLVKKMEDEHRIDDGIRQMLFD 329
KA + +V P PL M E + L M + K+ E ++ +VK E I + +
Sbjct: 50 KAVTDQVFPYPLNMTDEQKETLGMVMSPLEKMLVE-VNDVVKNDETSD-IPRAVLDQFAE 107
Query: 330 NGLMGIETPVEYSGSGCNFLTMMLVVEELSRVDPAVAAYVDIHNTLVNSLFMKLGTEEQK 509
G G+ P E GSG N M V E + D + H ++ + GT+ QK
Sbjct: 108 LGTFGVLVPPELEGSGFNNSQMARVAEIVGAYDLGFGVVMGAHQSIGYKGILLEGTDAQK 167
Query: 510 KKYLTKLCT-EYAGSFCLTEPSSGSDAFALKTVAK--KEGEHYIISGSKMWISNSDVAGV 680
+KYL L T +F LTEP++GSDA +++T A+ +G+HY+++G K+WISN A V
Sbjct: 168 QKYLPDLATGRKFAAFALTEPTTGSDASSVRTRAELSADGKHYVLNGGKIWISNGGFADV 227
Query: 681 FLVMTNADPSKGYKGIT-----CFIVERETPGL 764
F V P K G T FIVER G+
Sbjct: 228 FTVFAQT-PVKQADGSTKDKMSAFIVERAFGGV 259
>U28943-2|AAA68357.1| 613|Caenorhabditis elegans Hypothetical
protein E04F6.5a protein.
Length = 613
Score = 96.7 bits (230), Expect = 2e-20
Identities = 72/213 (33%), Positives = 104/213 (48%), Gaps = 11/213 (5%)
Frame = +3
Query: 159 KAYSTEVTPRPLTMLTEDE--LAM-RETIRKLATEQISPLVKKMEDEHRIDDGIRQMLFD 329
KA + +V P PL M E + L M + K+ E ++ +VK E I + +
Sbjct: 50 KAVTDQVFPYPLNMTDEQKETLGMVMSPLEKMLVE-VNDVVKNDETSD-IPRAVLDQFAE 107
Query: 330 NGLMGIETPVEYSGSGCNFLTMMLVVEELSRVDPAVAAYVDIHNTLVNSLFMKLGTEEQK 509
G G+ P E GSG N M V E + D + H ++ + GT+ QK
Sbjct: 108 LGTFGVLVPPELEGSGFNNSQMARVAEIVGAYDLGFGVVMGAHQSIGYKGILLEGTDAQK 167
Query: 510 KKYLTKLCT-EYAGSFCLTEPSSGSDAFALKTVAK--KEGEHYIISGSKMWISNSDVAGV 680
+KYL L T +F LTEP++GSDA +++T A+ +G+HY+++G K+WISN A V
Sbjct: 168 QKYLPDLATGRKFAAFALTEPTTGSDASSVRTRAELSADGKHYVLNGGKIWISNGGFADV 227
Query: 681 FLVMTNADPSKGYKGIT-----CFIVERETPGL 764
F V P K G T FIVER G+
Sbjct: 228 FTVFAQT-PVKQADGSTKDKMSAFIVERAFGGV 259
>L16622-6|AAA27913.2| 408|Caenorhabditis elegans Hypothetical
protein C02D5.1 protein.
Length = 408
Score = 89.4 bits (212), Expect = 2e-18
Identities = 50/172 (29%), Positives = 91/172 (52%), Gaps = 3/172 (1%)
Frame = +3
Query: 207 EDELAMRETIRKLATEQISPLVKKMEDEHRIDDG-IRQMLFDNGLMGIETPVEYSGSGCN 383
E AM+ ++ KL E+I+P V + E R + +ML G+ + PV+Y G+G +
Sbjct: 27 EPHFAMQNSLAKLIKEKINPNVAQWEKSGRYPAHFVFKMLGQLGVFAVNKPVDYGGTGRD 86
Query: 384 FLTMMLVVEELSRVD-PAVAAYVDIHNTLVNSLFMKLGTEEQKKKYLT-KLCTEYAGSFC 557
F + + E++ VD ++ V + + + + G++ + ++L + + S
Sbjct: 87 FAMSIAIAEQIGAVDCGSIPMSVMVQSDMSTPALAQFGSDSLRNRFLRPSINGDLVSSIA 146
Query: 558 LTEPSSGSDAFALKTVAKKEGEHYIISGSKMWISNSDVAGVFLVMTNADPSK 713
++EP +GSD A++T A++ G II+GSKMWI+N D A V+ N +K
Sbjct: 147 VSEPHAGSDVSAIRTHARRYGSDLIINGSKMWITNGDQADWACVLVNTSNAK 198
>U97194-5|AAB52448.1| 442|Caenorhabditis elegans Hypothetical
protein C37A2.3 protein.
Length = 442
Score = 85.4 bits (202), Expect = 4e-17
Identities = 54/211 (25%), Positives = 104/211 (49%), Gaps = 4/211 (1%)
Frame = +3
Query: 144 AKTQMKAYSTEVTPRPLTMLTEDELAMRETIRKLATEQISPLVKKMEDEHRIDDG-IRQM 320
A T S + R + E M++++ KL E+I+P V K E + R + +M
Sbjct: 40 AVTSTSPKSEKPVAREHMIYDETHFVMQKSLGKLIEEKINPNVAKWEQDGRYPAHLVFKM 99
Query: 321 LFDNGLMGIETPVEYSGSGCNFLTMMLVVEELSRVD-PAVAAYVDIHNTLVNSLFMKLGT 497
L D+G+ G+ P + G+G + + E++ ++ ++ V + + + G+
Sbjct: 100 LGDHGVFGVNKPEAFGGTGTDIAMATAIAEQMGAINCGSIPMSVMVQTDMSTPALAQFGS 159
Query: 498 EEQKKKYLTKLCT-EYAGSFCLTEPSSGSDAFALKTVAKKEGEHYIISGSKMWISNSDVA 674
+ ++++L T + S ++EP +GSD A+ T A+++G II+GSKMWI+N A
Sbjct: 160 DALRERFLRPSITGDLVSSLAVSEPHAGSDVSAVHTHARRQGSDLIINGSKMWITNGGQA 219
Query: 675 GVFLVMTN-ADPSKGYKGITCFIVERETPGL 764
V+ N ++ S +K + V + G+
Sbjct: 220 DWACVLVNTSNTSNVHKNKSLVCVPLDAVGV 250
>Z66513-4|CAA91333.1| 409|Caenorhabditis elegans Hypothetical
protein F54D5.7 protein.
Length = 409
Score = 85.0 bits (201), Expect = 5e-17
Identities = 61/194 (31%), Positives = 99/194 (51%), Gaps = 6/194 (3%)
Frame = +3
Query: 201 LTEDELAMRETIRKLATEQISPLVKKMEDEHRIDDGIRQMLFDNGLMGIETPVEYSGSGC 380
LTEDE ++ + R+ E++ P V + + D + + GL+G Y G GC
Sbjct: 32 LTEDERSLMLSAREYCQERLLPRVTEAYRTEKFDPSLIPEMGSMGLLG----APYQGYGC 87
Query: 381 NFLTMM---LVVEELSRVDPAVAAYVDIHNTLVNSLFMKLGTEEQKKKYLTKLCT-EYAG 548
+ + L+ E+ RVD + + + +LV G+E+QK+KY+ L + + G
Sbjct: 88 AGTSTVGYGLIAREVERVDSGYRSTMSVQTSLVIGPIYNYGSEDQKQKYIPDLASGKKIG 147
Query: 549 SFCLTEPSSGSDAFALKTVA--KKEGEHYIISGSKMWISNSDVAGVFLVMTNADPSKGYK 722
F LTEP+ GS+ ++T A + + Y ++GSK WISNS V+ V +V A ++
Sbjct: 148 CFGLTEPNHGSNPGGMETKATWDETTKTYKLNGSKTWISNSPVSDVMVVW--ARSARHNN 205
Query: 723 GITCFIVERETPGL 764
I FI+ER GL
Sbjct: 206 KIKGFILERGMKGL 219
>U41279-9|AAL02437.1| 220|Caenorhabditis elegans Hypothetical
protein C17C3.12c protein.
Length = 220
Score = 82.2 bits (194), Expect = 4e-16
Identities = 33/57 (57%), Positives = 48/57 (84%)
Frame = +3
Query: 594 LKTVAKKEGEHYIISGSKMWISNSDVAGVFLVMTNADPSKGYKGITCFIVERETPGL 764
++TVAKK+G+H+I++GSK ISN+ +A FLV+ NADP KGY+G+TCFIV+R+ G+
Sbjct: 1 MQTVAKKDGDHFILNGSKWGISNAPIADFFLVLANADPEKGYRGVTCFIVDRDHEGV 57
>U97002-9|AAB52261.2| 985|Caenorhabditis elegans Hypothetical
protein K09H11.1 protein.
Length = 985
Score = 46.0 bits (104), Expect = 3e-05
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Frame = +3
Query: 477 LFMKLGTEEQKKKYLTKLCT-EYAGSFCLTEPS-SGSDAFALKTVAKKEGEHYIISGSKM 650
+ +K G+EEQK K+LT L E F +TEP + SDA ++ + G YII+ K
Sbjct: 691 VLIKYGSEEQKSKWLTPLLNGEIKSCFAMTEPDVASSDATNIQGSIVRVGNEYIINARKW 750
Query: 651 WISNS 665
+ISN+
Sbjct: 751 FISNA 755
>U41279-8|AAL02436.1| 307|Caenorhabditis elegans Hypothetical
protein C17C3.12b protein.
Length = 307
Score = 41.5 bits (93), Expect = 6e-04
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Frame = +3
Query: 117 RSQATAAVGAKTQMKAYSTEVTPR--PLTMLTEDELAMRETIRKLATEQISPLVKKMEDE 290
R +A+ + + S + PR PL L E+E + E ++ A + PLV++M+ +
Sbjct: 6 RKLPISAISTFSTTGSISAQQQPRVFPLQHLNENEKKLVEKVKNFAQSSVKPLVREMDRD 65
Query: 291 HRIDDGIRQMLFDNGLMGIE 350
RI+ + + FD LMG++
Sbjct: 66 ARINKQLLKKAFDLKLMGLK 85
>U58756-9|AAC48086.1| 667|Caenorhabditis elegans Hypothetical
protein F58F9.7 protein.
Length = 667
Score = 39.5 bits (88), Expect = 0.003
Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 5/92 (5%)
Frame = +3
Query: 402 VVEELSRVDPAVAAYVDIHNTLVNSLFMKLGTEEQKKKYLTKLCTEYAGSFCLTEPSSGS 581
+ E L D +A + +H + + +GT+ K E G+FCLTE GS
Sbjct: 88 LTETLEAYDQGTSARLFLHGNVFGAAVKSMGTDRHKDLIQKTENNEIVGAFCLTEVGHGS 147
Query: 582 DAFALKTVAKKEGEHYI-----ISGSKMWISN 662
+ ++T A + + +S K W N
Sbjct: 148 NTAEIQTTATFDNGELVFNTPSVSAIKCWAGN 179
>U40797-10|AAK95871.1| 617|Caenorhabditis elegans Gex interacting
protein protein9, isoform a protein.
Length = 617
Score = 29.9 bits (64), Expect = 2.1
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +3
Query: 273 KKMEDEHRIDDGIRQMLFDNGLMGIETPVEYSGSGCNFLTMMLVVEELSRVDPAVAAYVD 452
K +E E ++ + L N + + + G G + V EELS VD V Y
Sbjct: 99 KLIEKEGKLASDTIEALRSNAIFSLAIGKYFDGIGMCNKDLSKVFEELS-VDWNV--YTT 155
Query: 453 IH-NTLVNSLFMKLGTEEQKKKYL 521
H + LV ++ G++EQK KYL
Sbjct: 156 SHISLLVANILTIYGSDEQKSKYL 179
>AF098997-2|AAC68722.2| 796|Caenorhabditis elegans Hypothetical
protein T10D4.6 protein.
Length = 796
Score = 29.9 bits (64), Expect = 2.1
Identities = 30/125 (24%), Positives = 53/125 (42%)
Frame = +3
Query: 117 RSQATAAVGAKTQMKAYSTEVTPRPLTMLTEDELAMRETIRKLATEQISPLVKKMEDEHR 296
++QA +V + + + +P+ E A + RK AT S + E
Sbjct: 14 KAQAQTSVETVAKRRGRPAKEKKQPVPKKAEPAKASKPRARKSATGNKSEKPQASVAEQA 73
Query: 297 IDDGIRQMLFDNGLMGIETPVEYSGSGCNFLTMMLVVEELSRVDPAVAAYVDIHNTLVNS 476
I Q+ +N ++GIE P + + + VVE + R VAAY ++ T +N
Sbjct: 74 GISQIPQLQHNNEVIGIEAPTTSAAPSRAQIPEVPVVEHIER--HKVAAY--LNRTYLNR 129
Query: 477 LFMKL 491
++L
Sbjct: 130 RRLRL 134
>U28941-6|AAC71101.2| 1788|Caenorhabditis elegans Hypothetical
protein F31D5.5 protein.
Length = 1788
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +3
Query: 114 WRSQATAAVGAKTQMKAYSTEVTPRPLTMLTED-ELAMRE 230
W + AT T + A T TP+P T L ED ++++E
Sbjct: 206 WWNAATGTTDKTTSVAAGGTTNTPKPFTFLLEDVNISLKE 245
>AY314774-1|AAQ84881.1| 1757|Caenorhabditis elegans methuselah-like
protein MTH-1 protein.
Length = 1757
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +3
Query: 114 WRSQATAAVGAKTQMKAYSTEVTPRPLTMLTED-ELAMRE 230
W + AT T + A T TP+P T L ED ++++E
Sbjct: 175 WWNAATGTTDKTTSVAAGGTTNTPKPFTFLLEDVNISLKE 214
>Z75954-6|CAJ55257.1| 1145|Caenorhabditis elegans Hypothetical
protein F58H1.1b protein.
Length = 1145
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Frame = +2
Query: 74 PITTRCWQQDFRTMEVPGNGCRW----SKDSDESIQHRS 178
P + C Q DFR M G C W K +D+++ HR+
Sbjct: 379 PEPSVCCQFDFRRMPEGGKSCDWGIPPQKINDDNVAHRA 417
>Z75954-5|CAB00104.1| 1143|Caenorhabditis elegans Hypothetical
protein F58H1.1a protein.
Length = 1143
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Frame = +2
Query: 74 PITTRCWQQDFRTMEVPGNGCRW----SKDSDESIQHRS 178
P + C Q DFR M G C W K +D+++ HR+
Sbjct: 377 PEPSVCCQFDFRRMPEGGKSCDWGIPPQKINDDNVAHRA 415
>U39854-2|AAA81077.2| 703|Caenorhabditis elegans Puf (pumilio/fbf)
domain-containingprotein 9 protein.
Length = 703
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = +3
Query: 633 ISGSKMWISNSDVAGVFLVMTNADPSKGYKGITCFIVERE 752
+SG+ W S AG+F M ADPS G G+ V E
Sbjct: 139 VSGN--WYSGG--AGIFSTMQQADPSNGMPGMAAEFVNNE 174
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -2
Query: 401 QHHCQEIAAGTAVFYRSFDAHQPIIKQHL 315
+HH E T V FD H+P++ Q +
Sbjct: 3334 KHHVTETTTTTTVTREYFDEHEPLVSQEI 3362
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -2
Query: 401 QHHCQEIAAGTAVFYRSFDAHQPIIKQHL 315
+HH E T V FD H+P++ Q +
Sbjct: 3334 KHHVTETTTTTTVTREYFDEHEPLVSQEI 3362
>AL132864-2|CAB60592.1| 201|Caenorhabditis elegans Hypothetical
protein Y53H1A.3 protein.
Length = 201
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = +2
Query: 332 WVDGHRNSGRIQRFRLQFPDNDVGGGRTVSSGPSR 436
W DGH F PDND G GR GP R
Sbjct: 123 WTDGHTTGTEAMVFGPGQPDNDHGAGR----GPQR 153
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,730,450
Number of Sequences: 27780
Number of extensions: 381335
Number of successful extensions: 1254
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1236
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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