Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt19b01
         (741 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ454673-1|ABE66757.1|   92|Homo sapiens immunoglobulin heavy ch...    34   0.47 
AY393114-1|AAS86049.1|  152|Homo sapiens immunoglobulin heavy ch...    33   0.81 
DQ322737-1|ABC66859.1|  125|Homo sapiens immunoglobulin heavy ch...    32   1.9  
EF177993-1|ABM67148.1|  124|Homo sapiens immunoglobulin heavy ch...    31   4.3  
AF460578-1|AAM87949.1|   67|Homo sapiens immunoglobulin heavy ch...    30   7.6  

>DQ454673-1|ABE66757.1|   92|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 92

 Score = 34.3 bits (75), Expect = 0.47
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +2

Query: 572 RSQEDGNYAATVFYSEKTGYHIEYWGQSNDLAV 670
           RS++   Y  T +Y + +GY+ +YWGQ   + V
Sbjct: 58  RSEDTAVYYCTSYYYDSSGYYFDYWGQGTLVTV 90


>AY393114-1|AAS86049.1|  152|Homo sapiens immunoglobulin heavy chain
           protein.
          Length = 152

 Score = 33.5 bits (73), Expect = 0.81
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +2

Query: 593 YAATVFYSEKTGYHIEYWGQSNDLAVIPKGVARA 694
           Y A+++Y + +GY  +YWGQ   L  +  G A A
Sbjct: 91  YCASLYYYDSSGYSFDYWGQGT-LVTVSSGSASA 123


>DQ322737-1|ABC66859.1|  125|Homo sapiens immunoglobulin heavy chain
           variable region EM1-PPS-14-VH3-15 protein.
          Length = 125

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +2

Query: 593 YAATVFYSEKTGYHIEYWGQSNDLAVIPKG 682
           Y A  +Y + +GY ++YWGQ   + V  +G
Sbjct: 96  YCARTYYYDSSGYPLDYWGQGTLVTVSSEG 125


>EF177993-1|ABM67148.1|  124|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 124

 Score = 31.1 bits (67), Expect = 4.3
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 593 YAATVFYSEKTGYHIEYWGQSNDLAV 670
           Y A V Y    GY+++YWGQ   + V
Sbjct: 97  YCARVVYGNNYGYYLDYWGQGTLVTV 122


>AF460578-1|AAM87949.1|   67|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 67

 Score = 30.3 bits (65), Expect = 7.6
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +2

Query: 593 YAATVFYSEKTGYHIEYWGQ 652
           Y  TV Y + +GY ++YWGQ
Sbjct: 48  YCTTVKYYDSSGYVVDYWGQ 67


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,053,510
Number of Sequences: 237096
Number of extensions: 1933240
Number of successful extensions: 7898
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7898
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8847149012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)