Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt19b01
         (741 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001475-1|AAN71230.1|  658|Drosophila melanogaster LD13253p pro...    82   9e-16
AE014296-945|AAN12118.2|  658|Drosophila melanogaster CG10645-PC...    82   9e-16
AE014296-944|AAF50787.3|  658|Drosophila melanogaster CG10645-PB...    82   9e-16
AE014296-943|AAG22333.2|  658|Drosophila melanogaster CG10645-PA...    82   9e-16
U57314-1|AAB49926.1|  624|Drosophila melanogaster LAMA protein.        58   9e-09

>BT001475-1|AAN71230.1|  658|Drosophila melanogaster LD13253p
           protein.
          Length = 658

 Score = 81.8 bits (193), Expect = 9e-16
 Identities = 37/92 (40%), Positives = 52/92 (56%)
 Frame = +2

Query: 464 ILKVVGASWLQTKISSYXXXXXXXXXXXXXFAGQMERSQEDGNYAATVFYSEKTGYHIEY 643
           +LKVVGASW +T+I +Y             F G MER + DG Y AT  ++++ G+ IE 
Sbjct: 1   MLKVVGASWQKTRIGTYILIGAGLLVIGAFFIGYMERPEYDGTYCATALWTKQVGFQIEN 60

Query: 644 WGQSNDLAVIPKGVARAYFRMDIDTTGWSILE 739
           W Q NDL  IP GV R  ++  +   GW+ +E
Sbjct: 61  WKQQNDLVNIPTGVGRICYKDSVYENGWAQIE 92


>AE014296-945|AAN12118.2|  658|Drosophila melanogaster CG10645-PC,
           isoform C protein.
          Length = 658

 Score = 81.8 bits (193), Expect = 9e-16
 Identities = 37/92 (40%), Positives = 52/92 (56%)
 Frame = +2

Query: 464 ILKVVGASWLQTKISSYXXXXXXXXXXXXXFAGQMERSQEDGNYAATVFYSEKTGYHIEY 643
           +LKVVGASW +T+I +Y             F G MER + DG Y AT  ++++ G+ IE 
Sbjct: 1   MLKVVGASWQKTRIGTYILIGAGLLVIGAFFIGYMERPEYDGTYCATALWTKQVGFQIEN 60

Query: 644 WGQSNDLAVIPKGVARAYFRMDIDTTGWSILE 739
           W Q NDL  IP GV R  ++  +   GW+ +E
Sbjct: 61  WKQQNDLVNIPTGVGRICYKDSVYENGWAQIE 92


>AE014296-944|AAF50787.3|  658|Drosophila melanogaster CG10645-PB,
           isoform B protein.
          Length = 658

 Score = 81.8 bits (193), Expect = 9e-16
 Identities = 37/92 (40%), Positives = 52/92 (56%)
 Frame = +2

Query: 464 ILKVVGASWLQTKISSYXXXXXXXXXXXXXFAGQMERSQEDGNYAATVFYSEKTGYHIEY 643
           +LKVVGASW +T+I +Y             F G MER + DG Y AT  ++++ G+ IE 
Sbjct: 1   MLKVVGASWQKTRIGTYILIGAGLLVIGAFFIGYMERPEYDGTYCATALWTKQVGFQIEN 60

Query: 644 WGQSNDLAVIPKGVARAYFRMDIDTTGWSILE 739
           W Q NDL  IP GV R  ++  +   GW+ +E
Sbjct: 61  WKQQNDLVNIPTGVGRICYKDSVYENGWAQIE 92


>AE014296-943|AAG22333.2|  658|Drosophila melanogaster CG10645-PA,
           isoform A protein.
          Length = 658

 Score = 81.8 bits (193), Expect = 9e-16
 Identities = 37/92 (40%), Positives = 52/92 (56%)
 Frame = +2

Query: 464 ILKVVGASWLQTKISSYXXXXXXXXXXXXXFAGQMERSQEDGNYAATVFYSEKTGYHIEY 643
           +LKVVGASW +T+I +Y             F G MER + DG Y AT  ++++ G+ IE 
Sbjct: 1   MLKVVGASWQKTRIGTYILIGAGLLVIGAFFIGYMERPEYDGTYCATALWTKQVGFQIEN 60

Query: 644 WGQSNDLAVIPKGVARAYFRMDIDTTGWSILE 739
           W Q NDL  IP GV R  ++  +   GW+ +E
Sbjct: 61  WKQQNDLVNIPTGVGRICYKDSVYENGWAQIE 92


>U57314-1|AAB49926.1|  624|Drosophila melanogaster LAMA protein.
          Length = 624

 Score = 58.4 bits (135), Expect = 9e-09
 Identities = 24/58 (41%), Positives = 35/58 (60%)
 Frame = +2

Query: 566 MERSQEDGNYAATVFYSEKTGYHIEYWGQSNDLAVIPKGVARAYFRMDIDTTGWSILE 739
           MER + DG Y AT  ++++ G+ IE W Q NDL  IP GV R  ++  +   GW+ +E
Sbjct: 1   MERPEYDGTYCATALWTKQVGFQIENWKQQNDLVNIPTGVGRICYKDSVYENGWAQIE 58


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,412,978
Number of Sequences: 53049
Number of extensions: 568241
Number of successful extensions: 1733
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1733
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3355404063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)