Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt19b01
         (741 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    30   0.020
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    26   0.32 
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    25   0.75 
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    25   0.75 
AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           22   7.0  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           22   7.0  

>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 30.3 bits (65), Expect = 0.020
 Identities = 19/81 (23%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
 Frame = +3

Query: 498 RKLVLTSSVYLVY*LSWRFLRDRWKEVKRTVTTQPQYFIRRKQDITLNIGVKATTSP*SL 677
           R L+ T +VY+    S     +  K+V  ++       +  +   TLN G++    P  +
Sbjct: 94  RDLIWTPTVYVSNEPSSAITGNNVKDVLVSIDPSGMVRLNTRLQATLNCGLRLEKFPFDV 153

Query: 678 KESPVLIFEWT-LIRQVGLFW 737
           +E P++   WT  +  + L+W
Sbjct: 154 QECPLIFESWTHNVLDMVLYW 174


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 26.2 bits (55), Expect = 0.32
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = -3

Query: 697 ISTGDSFRDHGEVVALTPIFNVISCFL 617
           ISTG  +R+H +++A T   NV+  F+
Sbjct: 128 ISTGQKWRNHRKLIAPTFHLNVLKSFI 154


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 25.0 bits (52), Expect = 0.75
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +2

Query: 323 LFDGHFSTRKDYIHSLSLHYY*IPK 397
           LF GH S     +H+L L+Y  +P+
Sbjct: 253 LFSGHESNIASVLHALQLYYPHVPE 277


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 25.0 bits (52), Expect = 0.75
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +2

Query: 323 LFDGHFSTRKDYIHSLSLHYY*IPK 397
           LF GH S     +H+L L+Y  +P+
Sbjct: 268 LFSGHESNIASVLHALQLYYPHVPE 292


>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -3

Query: 235 LGRHPFRTYVLKPYNKTH 182
           LGR     + LKPYN  H
Sbjct: 52  LGRRHRYNFQLKPYNPEH 69


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -3

Query: 235 LGRHPFRTYVLKPYNKTH 182
           LGR     + LKPYN  H
Sbjct: 53  LGRRHRYNFQLKPYNPEH 70


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,908
Number of Sequences: 438
Number of extensions: 3567
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)