Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt19a24
(575 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ062806-1|AAY56679.1| 197|Drosophila melanogaster unknown prot... 37 0.022
AY089598-1|AAL90336.1| 197|Drosophila melanogaster RE19358p pro... 37 0.022
AE014134-1773|AAF52867.1| 197|Drosophila melanogaster CG18145-P... 37 0.022
DQ072161-1|AAY82588.1| 197|Drosophila melanogaster RPA-interact... 36 0.052
AY129442-1|AAM76184.1| 1124|Drosophila melanogaster LD16566p pro... 32 0.64
AE014296-2184|AAF49884.1| 1087|Drosophila melanogaster CG10971-P... 32 0.64
AE014296-2183|AAF49885.2| 1124|Drosophila melanogaster CG10971-P... 32 0.64
AE014297-3626|AAF56336.1| 462|Drosophila melanogaster CG13634-P... 31 1.5
AE014297-3461|AAF56238.3| 2048|Drosophila melanogaster CG6129-PB... 31 1.5
BT015273-1|AAT94502.1| 2064|Drosophila melanogaster LD20667p pro... 30 2.6
BT003525-1|AAO39529.1| 513|Drosophila melanogaster RE22259p pro... 30 2.6
AE014298-1127|AAF46324.2| 513|Drosophila melanogaster CG15335-P... 30 2.6
AE014134-16|AAF51561.2| 2064|Drosophila melanogaster CG11376-PA ... 30 2.6
AY118691-1|AAM50551.1| 1230|Drosophila melanogaster AT16851p pro... 29 4.5
AY070895-1|AAL48517.1| 281|Drosophila melanogaster LP03261p pro... 29 4.5
AE014297-4393|AAF56904.1| 230|Drosophila melanogaster CG11470-P... 29 4.5
AE014297-3462|AAN13982.2| 1230|Drosophila melanogaster CG6129-PC... 29 4.5
AY321364-1|AAP84718.1| 3241|Drosophila melanogaster PHD zinc fin... 29 6.0
AE014296-31|AAS64921.1| 3241|Drosophila melanogaster CG7036-PB, ... 29 6.0
AE014296-30|AAF47343.1| 3201|Drosophila melanogaster CG7036-PA, ... 29 6.0
AE013599-3283|AAM71018.2| 2968|Drosophila melanogaster CG13492-P... 29 6.0
AE013599-3282|AAF46766.2| 2931|Drosophila melanogaster CG13492-P... 29 6.0
AE014296-2626|ABC66134.1| 270|Drosophila melanogaster CG33258-P... 28 7.9
>DQ062806-1|AAY56679.1| 197|Drosophila melanogaster unknown
protein.
Length = 197
Score = 36.7 bits (81), Expect = 0.022
Identities = 34/174 (19%), Positives = 74/174 (42%), Gaps = 10/174 (5%)
Frame = +3
Query: 36 NKVQKCRGTLQDKFRELTFEKDNMC---------NVLKELYK-EMIDFSEDILEIEDNIL 185
N++ + R L++K+R+ E N C + L+E+ + E+ + +D+ E+E+ IL
Sbjct: 30 NQMPRLREMLREKYRKRIIETRNRCTDAQREIQLSELREILRLELSELEKDV-ELEELIL 88
Query: 186 QEIKNXXXXXXXXXXXXXYQKTHMDDNIDWSKIEQDNVIVCPICQRDNFMSVNSCLKCPS 365
+E+ + D EQ ++CP+CQ N C
Sbjct: 89 EELLSDVNEWYALGEKNLETLYAEPD-------EQQKEVLCPVCQIKNLRHHKGAFIC-E 140
Query: 366 CNVQIKTSMQTSEVKEHIFKCLDKHNSVCISDPQFTVIKDTSDCHIYLICETCN 527
C ++ + S +++ + + + H C +F + + + +Y +C +C+
Sbjct: 141 CGIRFEHSANMEQLQILLQQQIASHELQCTQALRFFI--EPASGQLYDMCGSCD 192
>AY089598-1|AAL90336.1| 197|Drosophila melanogaster RE19358p
protein.
Length = 197
Score = 36.7 bits (81), Expect = 0.022
Identities = 34/174 (19%), Positives = 74/174 (42%), Gaps = 10/174 (5%)
Frame = +3
Query: 36 NKVQKCRGTLQDKFRELTFEKDNMC---------NVLKELYK-EMIDFSEDILEIEDNIL 185
N++ + R L++K+R+ E N C + L+E+ + E+ + +D+ E+E+ IL
Sbjct: 30 NQMPRLREMLREKYRKRIIETRNRCTDAQREIQLSELREILRLELSELEKDV-ELEELIL 88
Query: 186 QEIKNXXXXXXXXXXXXXYQKTHMDDNIDWSKIEQDNVIVCPICQRDNFMSVNSCLKCPS 365
+E+ + D EQ ++CP+CQ N C
Sbjct: 89 EELLSDVNEWYALGEKNLETLYAEPD-------EQQKEVLCPVCQIKNLRHHKGAFIC-E 140
Query: 366 CNVQIKTSMQTSEVKEHIFKCLDKHNSVCISDPQFTVIKDTSDCHIYLICETCN 527
C ++ + S +++ + + + H C +F + + + +Y +C +C+
Sbjct: 141 CGIRFEHSANMEQLQILLQQQIASHELQCTQALRFFI--EPASGQLYDMCGSCD 192
>AE014134-1773|AAF52867.1| 197|Drosophila melanogaster CG18145-PA
protein.
Length = 197
Score = 36.7 bits (81), Expect = 0.022
Identities = 34/174 (19%), Positives = 74/174 (42%), Gaps = 10/174 (5%)
Frame = +3
Query: 36 NKVQKCRGTLQDKFRELTFEKDNMC---------NVLKELYK-EMIDFSEDILEIEDNIL 185
N++ + R L++K+R+ E N C + L+E+ + E+ + +D+ E+E+ IL
Sbjct: 30 NQMPRLREMLREKYRKRIIETRNRCTDAQREIQLSELREILRLELSELEKDV-ELEELIL 88
Query: 186 QEIKNXXXXXXXXXXXXXYQKTHMDDNIDWSKIEQDNVIVCPICQRDNFMSVNSCLKCPS 365
+E+ + D EQ ++CP+CQ N C
Sbjct: 89 EELLSDVNEWYALGEKNLETLYAEPD-------EQQKEVLCPVCQIKNLRHHKGAFIC-E 140
Query: 366 CNVQIKTSMQTSEVKEHIFKCLDKHNSVCISDPQFTVIKDTSDCHIYLICETCN 527
C ++ + S +++ + + + H C +F + + + +Y +C +C+
Sbjct: 141 CGIRFEHSANMEQLQILLQQQIASHELQCTQALRFFI--EPASGQLYDMCGSCD 192
>DQ072161-1|AAY82588.1| 197|Drosophila melanogaster RPA-interacting
protein alpha protein.
Length = 197
Score = 35.5 bits (78), Expect = 0.052
Identities = 35/174 (20%), Positives = 72/174 (41%), Gaps = 10/174 (5%)
Frame = +3
Query: 36 NKVQKCRGTLQDKFRELTFEKDNMCN------VLKELYK----EMIDFSEDILEIEDNIL 185
N++ + R L++K+R+ E N C L EL + E+ + +D+ E+E+ IL
Sbjct: 30 NQMPRLREMLREKYRKRIIETRNRCTDAQREIQLSELREXLRLELSELEKDV-ELEELIL 88
Query: 186 QEIKNXXXXXXXXXXXXXYQKTHMDDNIDWSKIEQDNVIVCPICQRDNFMSVNSCLKCPS 365
+E+ + D EQ ++CP+CQ N C
Sbjct: 89 EELLSDVNEWYALGEKNLETLYAEPD-------EQQKEVLCPVCQIKNLRHHKGAFIC-E 140
Query: 366 CNVQIKTSMQTSEVKEHIFKCLDKHNSVCISDPQFTVIKDTSDCHIYLICETCN 527
C ++ + S +++ + + + H C +F + + + +Y +C +C+
Sbjct: 141 CGIRFEHSANMEQLQILLQQQIASHELQCTQALRFFI--EPASGQLYDMCGSCD 192
>AY129442-1|AAM76184.1| 1124|Drosophila melanogaster LD16566p
protein.
Length = 1124
Score = 31.9 bits (69), Expect = 0.64
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +3
Query: 27 NYRNKVQKCRGTLQDKFRELTFEKDNMCNVLKELYKEMIDFSEDILEIEDNILQEIK 197
N+ +K + GTL F EL D N +L E+ D+ EDI+ ++ I ++
Sbjct: 123 NFHDKNRMFPGTLNISFTELFIAVDRDLNYCFQLCVEIFDYLEDIIALQLTIFSSME 179
>AE014296-2184|AAF49884.1| 1087|Drosophila melanogaster CG10971-PB,
isoform B protein.
Length = 1087
Score = 31.9 bits (69), Expect = 0.64
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +3
Query: 27 NYRNKVQKCRGTLQDKFRELTFEKDNMCNVLKELYKEMIDFSEDILEIEDNILQEIK 197
N+ +K + GTL F EL D N +L E+ D+ EDI+ ++ I ++
Sbjct: 86 NFHDKNRMFPGTLNISFTELFIAVDRDLNYCFQLCVEIFDYLEDIIALQLTIFSSME 142
>AE014296-2183|AAF49885.2| 1124|Drosophila melanogaster CG10971-PA,
isoform A protein.
Length = 1124
Score = 31.9 bits (69), Expect = 0.64
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +3
Query: 27 NYRNKVQKCRGTLQDKFRELTFEKDNMCNVLKELYKEMIDFSEDILEIEDNILQEIK 197
N+ +K + GTL F EL D N +L E+ D+ EDI+ ++ I ++
Sbjct: 123 NFHDKNRMFPGTLNISFTELFIAVDRDLNYCFQLCVEIFDYLEDIIALQLTIFSSME 179
>AE014297-3626|AAF56336.1| 462|Drosophila melanogaster CG13634-PA
protein.
Length = 462
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +3
Query: 120 KELYKEMIDFSEDILEIEDNILQEI 194
KE +++ ++FSED+L ED LQ++
Sbjct: 364 KENFEDQVNFSEDVLHFEDEQLQQL 388
>AE014297-3461|AAF56238.3| 2048|Drosophila melanogaster CG6129-PB,
isoform B protein.
Length = 2048
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +3
Query: 42 VQKCRGTLQDKFRELTFEKDNMCNVLKELYKEMIDFSEDILEIE-DNI 182
VQ C Q++ ++L + + CN + EL KE+ + LE+E DN+
Sbjct: 735 VQNCLQEAQEERKKLRIQSVDQCNEIGELKKELAILDKARLELETDNL 782
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = +3
Query: 30 YRNKVQKCRGTLQDKFRELTFEKDNMCNVLKELYKEMIDFSEDILEIEDNILQE 191
++ K+++C + + L E++++C V +EL E I ED +E +N LQ+
Sbjct: 1107 HKIKLEECIRKQELQLSSLREERESLCRVSEELKME-IRLKEDRMESTNNELQD 1159
>BT015273-1|AAT94502.1| 2064|Drosophila melanogaster LD20667p
protein.
Length = 2064
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +3
Query: 306 CPICQRDNFMSVNSCLKCPSCNVQIKTSMQTSEVKEHIFKCLDKHNSVCISDPQ 467
CP + F +VN KCPS +IK ++ S +K+H ++ C PQ
Sbjct: 637 CPKFSTEAFTAVNYHNKCPSFYDEIKIALPAS-IKQHHHLLFTIYHVSCQKKPQ 689
>BT003525-1|AAO39529.1| 513|Drosophila melanogaster RE22259p
protein.
Length = 513
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +3
Query: 354 KCPSCNVQIKTSMQTSEVKEHIFKCLDKHNSVCISDPQFTV 476
KCP+ N ++KT ++H+ + ++ NS+ ++ PQ V
Sbjct: 334 KCPTLNCRLKTPPPALSAEQHLAR-IEVFNSLAVTAPQIEV 373
>AE014298-1127|AAF46324.2| 513|Drosophila melanogaster CG15335-PB
protein.
Length = 513
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +3
Query: 354 KCPSCNVQIKTSMQTSEVKEHIFKCLDKHNSVCISDPQFTV 476
KCP+ N ++KT ++H+ + ++ NS+ ++ PQ V
Sbjct: 334 KCPTLNCRLKTPPPALSAEQHLAR-IEVFNSLAVTAPQIEV 373
>AE014134-16|AAF51561.2| 2064|Drosophila melanogaster CG11376-PA
protein.
Length = 2064
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +3
Query: 306 CPICQRDNFMSVNSCLKCPSCNVQIKTSMQTSEVKEHIFKCLDKHNSVCISDPQ 467
CP + F +VN KCPS +IK ++ S +K+H ++ C PQ
Sbjct: 637 CPKFSTEAFTAVNYHNKCPSFYDEIKIALPAS-IKQHHHLLFTIYHVSCQKKPQ 689
>AY118691-1|AAM50551.1| 1230|Drosophila melanogaster AT16851p
protein.
Length = 1230
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = +3
Query: 30 YRNKVQKCRGTLQDKFRELTFEKDNMCNVLKELYKEMIDFSEDILEIEDNILQE 191
++ K+++C + + L E++++C V +EL E I ED +E +N LQ+
Sbjct: 289 HKIKLEECIRKQELQLSSLREERESLCRVSEELKME-IRLKEDRMESTNNELQD 341
>AY070895-1|AAL48517.1| 281|Drosophila melanogaster LP03261p
protein.
Length = 281
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 8/48 (16%)
Frame = +3
Query: 420 FKCLDKHNSVCISDPQFTVIKDTSDCHIYL--------ICETCNEMTY 539
+ L+ SVCI+D + ++DTSD + L TCN +TY
Sbjct: 213 YTILESRKSVCINDANRSYVEDTSDTYELLNNCLKNGPTTTTCNPLTY 260
>AE014297-4393|AAF56904.1| 230|Drosophila melanogaster CG11470-PA
protein.
Length = 230
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 8/48 (16%)
Frame = +3
Query: 420 FKCLDKHNSVCISDPQFTVIKDTSDCHIYL--------ICETCNEMTY 539
+ L+ SVCI+D + ++DTSD + L TCN +TY
Sbjct: 162 YTILESRKSVCINDANRSYVEDTSDTYELLNNCLKNGPTTTTCNPLTY 209
>AE014297-3462|AAN13982.2| 1230|Drosophila melanogaster CG6129-PC,
isoform C protein.
Length = 1230
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = +3
Query: 30 YRNKVQKCRGTLQDKFRELTFEKDNMCNVLKELYKEMIDFSEDILEIEDNILQE 191
++ K+++C + + L E++++C V +EL E I ED +E +N LQ+
Sbjct: 289 HKIKLEECIRKQELQLSSLREERESLCRVSEELKME-IRLKEDRMESTNNELQD 341
>AY321364-1|AAP84718.1| 3241|Drosophila melanogaster PHD zinc finger
protein rhinoceros protein.
Length = 3241
Score = 28.7 bits (61), Expect = 6.0
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +3
Query: 282 IEQDNVIVCPICQRDNFMSVNSCLKCPSCNV 374
IE D ++C +C+ + N + C +CN+
Sbjct: 307 IEFDENVICDVCRSPDSEEANEMVFCDNCNI 337
>AE014296-31|AAS64921.1| 3241|Drosophila melanogaster CG7036-PB,
isoform B protein.
Length = 3241
Score = 28.7 bits (61), Expect = 6.0
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +3
Query: 282 IEQDNVIVCPICQRDNFMSVNSCLKCPSCNV 374
IE D ++C +C+ + N + C +CN+
Sbjct: 307 IEFDENVICDVCRSPDSEEANEMVFCDNCNI 337
>AE014296-30|AAF47343.1| 3201|Drosophila melanogaster CG7036-PA,
isoform A protein.
Length = 3201
Score = 28.7 bits (61), Expect = 6.0
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +3
Query: 282 IEQDNVIVCPICQRDNFMSVNSCLKCPSCNV 374
IE D ++C +C+ + N + C +CN+
Sbjct: 307 IEFDENVICDVCRSPDSEEANEMVFCDNCNI 337
>AE013599-3283|AAM71018.2| 2968|Drosophila melanogaster CG13492-PB,
isoform B protein.
Length = 2968
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/48 (31%), Positives = 20/48 (41%)
Frame = +3
Query: 357 CPSCNVQIKTSMQTSEVKEHIFKCLDKHNSVCISDPQFTVIKDTSDCH 500
CP CN + + + C +S C+SDP T I T CH
Sbjct: 1764 CPRCNSNGCNTADSQDKYVECIVCDSSVDSNCVSDP--TQITKTRQCH 1809
>AE013599-3282|AAF46766.2| 2931|Drosophila melanogaster CG13492-PA,
isoform A protein.
Length = 2931
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/48 (31%), Positives = 20/48 (41%)
Frame = +3
Query: 357 CPSCNVQIKTSMQTSEVKEHIFKCLDKHNSVCISDPQFTVIKDTSDCH 500
CP CN + + + C +S C+SDP T I T CH
Sbjct: 1727 CPRCNSNGCNTADSQDKYVECIVCDSSVDSNCVSDP--TQITKTRQCH 1772
>AE014296-2626|ABC66134.1| 270|Drosophila melanogaster CG33258-PA
protein.
Length = 270
Score = 28.3 bits (60), Expect = 7.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 468 FTVIKDTSDCHIYLICE 518
FT+ K+ + CH YL CE
Sbjct: 217 FTIYKEDTSCHTYLYCE 233
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,355,359
Number of Sequences: 53049
Number of extensions: 436412
Number of successful extensions: 1850
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1847
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2276053890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -