Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt19a17
(825 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomy... 290 2e-79
SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomy... 145 6e-36
SPBC106.16 |||20S proteasome component alpha 4|Schizosaccharomyc... 135 8e-33
SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha 3|Sch... 134 1e-32
SPCC1795.04c |||20S proteasome component alpha 7|Schizosaccharom... 130 2e-31
SPAC6G10.04c |||20S proteasome component alpha 6 subunit Pre5|Sc... 104 1e-23
SPBC646.16 |||20S proteasome component alpha 1|Schizosaccharomyc... 101 9e-23
SPAC4A8.13c |pts1||20S proteasome component beta 5|Schizosacchar... 62 1e-10
SPBC4C3.10c |||20S proteasome component beta 1|Schizosaccharomyc... 44 2e-05
SPAC23D3.07 |pup1||20S proteasome component beta 2|Schizosacchar... 44 2e-05
SPCC4G3.19 |alp16||gamma tubulin complex subunit Alp16 |Schizosa... 27 4.3
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 27 4.3
SPAC3A11.02 |cps3|mug188|zinc finger protein Cps3|Schizosaccharo... 26 5.6
SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr ... 26 7.5
SPAC24C9.11 |||MIF4G/MA4 domain protein|Schizosaccharomyces pomb... 26 7.5
SPBC27B12.06 |gpi13||pig-O |Schizosaccharomyces pombe|chr 2|||Ma... 25 9.9
>SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 247
Score = 290 bits (711), Expect = 2e-79
Identities = 135/214 (63%), Positives = 170/214 (79%)
Frame = +2
Query: 134 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSTLME 313
MF+TRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIG+ T + VVL VEKR+TS LME
Sbjct: 1 MFMTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKDAVVLGVEKRLTSPLME 60
Query: 314 PTTIEKIVEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNERMSVESCAQAVSNLA 493
++EK+ E+D HI CA+SGL AD+RT++E ARV+ QNH F Y+E +ES Q++ +LA
Sbjct: 61 SHSVEKLFEIDSHIGCAISGLTADARTIIEHARVQTQNHRFTYDEPQGIESTTQSICDLA 120
Query: 494 IQFGDSDDDSGTAMSRPFGVAVMFAGIDEKGPQLFHMDPSGTFVQYDAKAIGSGSEGAQQ 673
++FG+ +D MSRPFGVA++ AGIDE GPQL+H +PSGT+ +Y+AKAIGSGSE A+
Sbjct: 121 LRFGEGEDGEERIMSRPFGVALLIAGIDEHGPQLYHSEPSGTYFRYEAKAIGSGSEPAKS 180
Query: 674 SLKEIYHKSMTLKEAIKSALTILKQVMEEKLSEK 775
L + +HK MTL+EA L +L+QVMEEKL K
Sbjct: 181 ELVKEFHKDMTLEEAEVLILKVLRQVMEEKLDSK 214
>SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 245
Score = 145 bits (352), Expect = 6e-36
Identities = 77/208 (37%), Positives = 124/208 (59%), Gaps = 1/208 (0%)
Frame = +2
Query: 152 EYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSTLMEPTTIEK 331
+Y + TFSP G+L Q+EYA+ A+ G T++GI ++GVVLA EK+ TS L ++EK
Sbjct: 4 KYAFSLTTFSPNGKLVQIEYALNAVNAGVTSVGIKATDGVVLATEKKPTSELAIGASLEK 63
Query: 332 IVEVDRHIACAVSGLMADSRTLVERARVECQNHWF-VYNERMSVESCAQAVSNLAIQFGD 508
+ + I SG+ D R LV+++R Q + +YNE + Q ++++ +
Sbjct: 64 VCAITPDIGMVYSGMGPDFRVLVDKSRKVAQTTYKKIYNEYPPTKILVQEIASV---MQE 120
Query: 509 SDDDSGTAMSRPFGVAVMFAGIDEKGPQLFHMDPSGTFVQYDAKAIGSGSEGAQQSLKEI 688
S G RPFGV+++ AG+DEKGP L+ +DPSGT+ + A AIG S A+ L++
Sbjct: 121 STQSGGV---RPFGVSLLVAGMDEKGPSLYQVDPSGTYFAWKATAIGKSSTAAKTFLEKR 177
Query: 689 YHKSMTLKEAIKSALTILKQVMEEKLSE 772
Y+ + L +A+ +A+ LK+ E +L+E
Sbjct: 178 YNDELELDDAVHTAILALKETFEGELTE 205
>SPBC106.16 |||20S proteasome component alpha 4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 259
Score = 135 bits (326), Expect = 8e-33
Identities = 72/205 (35%), Positives = 124/205 (60%), Gaps = 2/205 (0%)
Frame = +2
Query: 149 SEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSTLMEPTTIE 328
S YDR ++ FSP+GRL QVEY EA++ G+TAI + +E +V+ VE++ L + +
Sbjct: 2 SGYDRALSVFSPDGRLLQVEYGQEAVRRGTTAIALRGNECIVIGVERKNVPKLQNVSNFQ 61
Query: 329 KIVEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNERMSVESCAQAVSNLAIQFGD 508
KI VD H+ A +GL AD+R L+++ARVE QNH + +S+E + V+ + ++
Sbjct: 62 KIAMVDNHVCLAFAGLNADARILIDKARVEAQNHKLNLADPVSIEYLTRYVAGVQQKYTQ 121
Query: 509 SDDDSGTAMSRPFGVAVMFAGID--EKGPQLFHMDPSGTFVQYDAKAIGSGSEGAQQSLK 682
S G RPFGV+ + AG D + P+++ +P+G + + A AIG S+ A++ L+
Sbjct: 122 S---GGV---RPFGVSTLIAGFDVGDNTPRVYQTEPAGIYNAWKATAIGRASKAAREYLE 175
Query: 683 EIYHKSMTLKEAIKSALTILKQVME 757
+ + + ++ E I A++ L +V++
Sbjct: 176 KNWKEGLSRDETIHLAVSSLLEVVQ 200
>SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 248
Score = 134 bits (325), Expect = 1e-32
Identities = 77/208 (37%), Positives = 117/208 (56%), Gaps = 2/208 (0%)
Frame = +2
Query: 140 LTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSTLME-P 316
++RS YD FSPEGRL+QVEYA+EAI A+GI +G+VLA EK++TS L+E
Sbjct: 1 MSRS-YDSRTTIFSPEGRLYQVEYALEAINHAGVALGIVAKDGIVLAAEKKVTSKLLEQE 59
Query: 317 TTIEKIVEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNERMSVESCAQAVSNLAI 496
+ EK+ + ++ CAV+GL AD+ L+ AR Q + +NE M E + V +L
Sbjct: 60 ESAEKLYHIGDNMLCAVAGLTADANILINYARRVGQQYLQTFNEEMPCEQLVRRVCDLKQ 119
Query: 497 QFGDSDDDSGTAMSRPFGVAVMFAGIDE-KGPQLFHMDPSGTFVQYDAKAIGSGSEGAQQ 673
+ + RPFGV+ ++AG D +G QLF +PSG + + A +IG S Q
Sbjct: 120 GY------TQYGGLRPFGVSFLYAGWDHIRGYQLFQSNPSGNYGSWQANSIGGNSTSVQS 173
Query: 674 SLKEIYHKSMTLKEAIKSALTILKQVME 757
+++ Y + L EA A+ L + ++
Sbjct: 174 LMRQEYKDDINLDEASAMAVKFLSKTLD 201
>SPCC1795.04c |||20S proteasome component alpha
7|Schizosaccharomyces pombe|chr 3|||Manual
Length = 253
Score = 130 bits (314), Expect = 2e-31
Identities = 74/203 (36%), Positives = 114/203 (56%)
Frame = +2
Query: 155 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSTLMEPTTIEKI 334
YD G+ FSP+GRLFQ EYA +A++ ST IGI +GV+LA+EK +TS L++P +I
Sbjct: 8 YDLGL-FFSPDGRLFQAEYAYKAVENASTCIGIKCEDGVILALEKVVTSKLLKPRVNNRI 66
Query: 335 VEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNERMSVESCAQAVSNLAIQFGDSD 514
VDRHI A +G + D + +V+RAR E + Y + A + N F
Sbjct: 67 GSVDRHIGIATTGFIPDGQHIVKRARDEATSWRDNYGSPIPGTVIADRLGNYVQLF---- 122
Query: 515 DDSGTAMSRPFGVAVMFAGIDEKGPQLFHMDPSGTFVQYDAKAIGSGSEGAQQSLKEIYH 694
+ + RPFGV A D +GP L+ ++P+G + Y+ A G G + A+ L+++
Sbjct: 123 --TCYSSVRPFGVMSFVATYDSEGPHLYMVEPNGVYWGYNGAAAGKGRQVARNELEKLNF 180
Query: 695 KSMTLKEAIKSALTILKQVMEEK 763
S+ +K+A+K A IL +E+
Sbjct: 181 SSLKMKDAVKEAARILYATHDEE 203
>SPAC6G10.04c |||20S proteasome component alpha 6 subunit
Pre5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 104 bits (250), Expect = 1e-23
Identities = 67/214 (31%), Positives = 113/214 (52%), Gaps = 4/214 (1%)
Frame = +2
Query: 146 RSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSTLMEPTTI 325
R++YD T+SP+GRL QVEYA+EAIK GS +G+ + VL KR L +
Sbjct: 3 RNQYDGDATTWSPQGRLHQVEYALEAIKQGSATVGLVSKTHAVLVALKRNAEEL--SSYQ 60
Query: 326 EKIVEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNERMSVESCAQAVSNLAIQFG 505
+K++ +D HI A++GL D+R L + E + ++ + V + +S +A +
Sbjct: 61 KKLIRIDDHIGIAIAGLAPDARVLSNYMKQEALSSKTLFTRPIPVR---RLMSKVAEKAQ 117
Query: 506 DSDDDSGTAMSRPFGVAVMFAGIDEKGPQLFHMDPSGTFVQYDAKAIGSGSEGAQQSLKE 685
+ + G RP+GV + G DE GP L PSG ++Y ++GS S+ A+ ++
Sbjct: 118 INTQEYG---RRPYGVGFLVIGYDESGPHLLEFQPSGLVLEYLGTSMGSRSQSARTYIER 174
Query: 686 IY--HKSMTLKEAIKSALTILKQVM--EEKLSEK 775
+ +E I SAL L+ + +++L+E+
Sbjct: 175 NLDTFPDSSREELILSALRALRDTLSKDQELTEE 208
>SPBC646.16 |||20S proteasome component alpha 1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 244
Score = 101 bits (243), Expect = 9e-23
Identities = 53/167 (31%), Positives = 92/167 (55%), Gaps = 2/167 (1%)
Frame = +2
Query: 155 YDRGVNTFSPEGRLFQVEYAIEAIK-LGSTAIGICTSEGVVLAVEKRITSTLMEPTTIEK 331
+DR + FSPEGRL+QVEYA +A G T++G+ + +K++ L++ +T++
Sbjct: 7 FDRTITVFSPEGRLYQVEYAFKAFNNAGITSVGVTGKNCACVISQKKVPDKLIDASTVKH 66
Query: 332 IVEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNERMSVESCAQAVSNLAIQFGDS 511
+ + + I C ++G +AD+R V RAR E + M + A+ ++N+A
Sbjct: 67 VFPITKGIGCVMTGSIADARAQVSRARSEAAEFEYKNGYPMPCDVLAKRMANIA------ 120
Query: 512 DDDSGTAMSRPFGVAVMFAGIDEK-GPQLFHMDPSGTFVQYDAKAIG 649
+ A RP GVA+ +D++ GP LF +DP+G ++ Y A + G
Sbjct: 121 QVSTQRAAMRPLGVAMTLVAVDDEIGPSLFKLDPAGFYIGYKATSAG 167
>SPAC4A8.13c |pts1||20S proteasome component beta
5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 61.7 bits (143), Expect = 1e-10
Identities = 41/164 (25%), Positives = 83/164 (50%), Gaps = 1/164 (0%)
Frame = +2
Query: 233 GSTAIGICTSEGVVLAVEKRITS-TLMEPTTIEKIVEVDRHIACAVSGLMADSRTLVERA 409
G+T + G+V+ V+ R ++ L+ T++K++E++ ++ ++G AD +
Sbjct: 61 GTTTLAFRYQHGIVVCVDSRASAGPLIASQTVKKVIEINPYLLGTLAGGAADCQFWETVL 120
Query: 410 RVECQNHWFVYNERMSVESCAQAVSNLAIQFGDSDDDSGTAMSRPFGVAVMFAGIDEKGP 589
+EC+ H E +SV + ++ +SN+ + G +S + M AG + G
Sbjct: 121 GMECRLHQLRNKELISVSAASKILSNITYSY------KGYGLS----MGTMLAGTGKGGT 170
Query: 590 QLFHMDPSGTFVQYDAKAIGSGSEGAQQSLKEIYHKSMTLKEAI 721
L+++D GT ++ D ++GSGS A L Y ++ +EA+
Sbjct: 171 ALYYIDSDGTRLKGDLFSVGSGSTFAYGVLDSGYRWDLSKQEAL 214
>SPBC4C3.10c |||20S proteasome component beta 1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 226
Score = 44.4 bits (100), Expect = 2e-05
Identities = 39/180 (21%), Positives = 75/180 (41%), Gaps = 2/180 (1%)
Frame = +2
Query: 224 IKLGSTAIGICTSEGVVLAVEKRIT-STLMEPTTIEKIVEVDRHIACAVSGLMADSRTLV 400
I++G+T + +GV+LA + R T + +K+ ++ +I C SG AD++T+
Sbjct: 21 IRMGTTITALRYKDGVILAADSRTTMGAYIANRVTDKLTQLTDNIWCCRSGSAADTQTVA 80
Query: 401 ERARVECQNHWFVYNERMSVESCAQAVSNLAIQFGDSDDDSGTAMSRPFGVAVMFAGIDE 580
+ + + + SV + A S + Q ++ AG DE
Sbjct: 81 DLLKYYLSMYRIQFGHDPSVHTAATLASEMCYQ-----------NKNMLSAGLIVAGYDE 129
Query: 581 K-GPQLFHMDPSGTFVQYDAKAIGSGSEGAQQSLKEIYHKSMTLKEAIKSALTILKQVME 757
K G ++ + G+ + GSGS + ++MT +EA++ + ME
Sbjct: 130 KTGGDVYSIPLGGSLHKQPLAIGGSGSAFIYGFCDANFRENMTQEEAVEFLKNAVALAME 189
>SPAC23D3.07 |pup1||20S proteasome component beta
2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 267
Score = 44.4 bits (100), Expect = 2e-05
Identities = 37/170 (21%), Positives = 70/170 (41%), Gaps = 1/170 (0%)
Frame = +2
Query: 218 EAIKLGSTAIGICTSEGVVLAVEKRITS-TLMEPTTIEKIVEVDRHIACAVSGLMADSRT 394
+A G+T +G+ + +VL + R T+ ++ +K+ + +I CA +G AD+
Sbjct: 30 KATSTGTTIVGVIAKDCIVLGADTRATAGPIIADKNCKKLHLISPNIWCAGAGTAADTEF 89
Query: 395 LVERARVECQNHWFVYNERMSVESCAQAVSNLAIQFGDSDDDSGTAMSRPFGVAVMFAGI 574
+ + H N + V + + ++ G ++ G
Sbjct: 90 VTSMISSNIELHSLYTNRKPRVVTALTMLKQHLFRYQGH-----------IGAYLVLGGY 138
Query: 575 DEKGPQLFHMDPSGTFVQYDAKAIGSGSEGAQQSLKEIYHKSMTLKEAIK 724
D KGP LF + G+ + A+GSGS A L+ Y + EA++
Sbjct: 139 DCKGPHLFTIAAHGSSDKLPYVALGSGSLAAISVLETKYQPDLERHEAME 188
>SPCC4G3.19 |alp16||gamma tubulin complex subunit Alp16
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 759
Score = 26.6 bits (56), Expect = 4.3
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = -2
Query: 644 WPWHHTAQMYHSGPYETVEGLSHQCLQT*QQHQMAVTWLFR 522
+PW+ T+ + P +V G+S +C + Q A+ L +
Sbjct: 201 FPWNKTSSTFELDPTISVSGMSDECFASIVQKFSAIGGLIK 241
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 26.6 bits (56), Expect = 4.3
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 662 GAQQSLKEIYHKSMTLKEAIKSALTILKQVMEEK 763
G + +K+IYH +LKE S T++ + E K
Sbjct: 813 GTDKLMKKIYHCEQSLKEKTNSLETLVSEKKELK 846
>SPAC3A11.02 |cps3|mug188|zinc finger protein
Cps3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 583
Score = 26.2 bits (55), Expect = 5.6
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -1
Query: 567 ANITATPNGRDMAVPLSSSLS-PNCIAKLETA 475
+ +TATP+ + PLSS S PN I+ L T+
Sbjct: 345 STLTATPSSLENLYPLSSRRSVPNLISSLGTS 376
>SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 266
Score = 25.8 bits (54), Expect = 7.5
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +2
Query: 644 IGSGSEGAQQSLKEIYHKSMTLKEAIKSALTILKQVMEEKLSEKQC*SSDN 796
+G+ ++ +KE+ K KE++KS + L VM ++ K SSD+
Sbjct: 156 VGNELVESRDEIKELIEKQKVQKESVKSHESELSSVMSSEILPKA--SSDS 204
>SPAC24C9.11 |||MIF4G/MA4 domain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 775
Score = 25.8 bits (54), Expect = 7.5
Identities = 9/32 (28%), Positives = 21/32 (65%)
Frame = -1
Query: 207 STWNSLPSGLNVLTPRSYSERVRNILLLGYSR 112
++WN++PSG N L+ + ++ ++ L +S+
Sbjct: 521 ASWNNVPSGDNTLSTEALQDKKKSEELTAHSK 552
>SPBC27B12.06 |gpi13||pig-O |Schizosaccharomyces pombe|chr
2|||Manual
Length = 918
Score = 25.4 bits (53), Expect = 9.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 123 LIVKCFSHVPSMIAASTHSAL 185
+ KCFS + + A ST+SAL
Sbjct: 559 MFCKCFSEMSPLFACSTYSAL 579
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,740,040
Number of Sequences: 5004
Number of extensions: 83879
Number of successful extensions: 254
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 233
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 243
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 404442380
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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