Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt19a17
(825 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical pr... 299 1e-81
Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical pr... 151 8e-37
AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome al... 131 7e-31
Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical pr... 116 2e-26
AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome al... 108 4e-24
Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical pr... 97 1e-20
Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical pr... 95 4e-20
Z81564-1|CAB04567.1| 284|Caenorhabditis elegans Hypothetical pr... 51 1e-06
AC006672-3|AAK84540.1| 239|Caenorhabditis elegans Proteasome be... 41 0.001
U55855-2|AAA98018.1| 204|Caenorhabditis elegans Proteasome beta... 38 0.007
Z99709-4|CAB16855.1| 277|Caenorhabditis elegans Hypothetical pr... 37 0.015
L14745-10|AAK71356.1| 258|Caenorhabditis elegans Proteasome bet... 34 0.14
AF303265-1|AAG50223.1| 258|Caenorhabditis elegans proteasome co... 34 0.14
AF098985-5|AAC67418.1| 99|Caenorhabditis elegans Hypothetical ... 30 1.7
Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical p... 29 4.0
Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical pr... 29 4.0
AF026209-8|AAB71275.2| 328|Caenorhabditis elegans Seven tm rece... 29 4.0
AC024796-10|AAK29896.1| 623|Caenorhabditis elegans Hypothetical... 29 4.0
Z92825-3|CAB07311.1| 531|Caenorhabditis elegans Hypothetical pr... 29 5.3
Z81562-8|CAN99692.1| 1817|Caenorhabditis elegans Hypothetical pr... 29 5.3
Z81474-9|CAN99684.1| 1817|Caenorhabditis elegans Hypothetical pr... 29 5.3
Z75540-1|CAA99847.2| 1227|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z80219-7|CAN86594.1| 804|Caenorhabditis elegans Hypothetical pr... 28 9.3
Z80219-5|CAB02302.2| 784|Caenorhabditis elegans Hypothetical pr... 28 9.3
Z75546-12|CAN86896.1| 804|Caenorhabditis elegans Hypothetical p... 28 9.3
Z75546-10|CAA99896.2| 784|Caenorhabditis elegans Hypothetical p... 28 9.3
>Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical
protein F25H2.9 protein.
Length = 248
Score = 299 bits (735), Expect = 1e-81
Identities = 143/212 (67%), Positives = 176/212 (83%)
Frame = +2
Query: 134 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSTLME 313
MFLTRSEYDRGVNTFSPEGRLFQVEYAIEA+KLGST+IGI TSEGV+LA EKR TS LM
Sbjct: 1 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAVKLGSTSIGIKTSEGVLLAAEKRSTSKLMV 60
Query: 314 PTTIEKIVEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNERMSVESCAQAVSNLA 493
IEKI +VD+HI +GL+ADSRTLVERA++E QN WF YN ++ VE Q+V+NLA
Sbjct: 61 NDAIEKISKVDQHIGVTFAGLIADSRTLVERAQIEAQNFWFTYNRKIRVEDVTQSVANLA 120
Query: 494 IQFGDSDDDSGTAMSRPFGVAVMFAGIDEKGPQLFHMDPSGTFVQYDAKAIGSGSEGAQQ 673
+QFG DDD +MSRPFGVA++FAG+D++G +LFH+DPSGTF+ AK+IG+ S+GA+Q
Sbjct: 121 LQFG--DDDVKASMSRPFGVAMLFAGVDQEGAKLFHLDPSGTFIDCKAKSIGAASDGAEQ 178
Query: 674 SLKEIYHKSMTLKEAIKSALTILKQVMEEKLS 769
+LKE YH ++T+KE +K AL ILKQVMEEKL+
Sbjct: 179 NLKEQYHDALTIKEGLKMALAILKQVMEEKLN 210
>Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical
protein C36B1.4 protein.
Length = 253
Score = 151 bits (365), Expect = 8e-37
Identities = 79/205 (38%), Positives = 123/205 (60%), Gaps = 3/205 (1%)
Frame = +2
Query: 149 SEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSTLMEPTTIE 328
+ YDR + FSP+G LFQVEYA EA+K GSTA+G+ + +V+ VEK+ L + TI
Sbjct: 2 NRYDRAITIFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDCIVIGVEKKSIPALQDDRTIR 61
Query: 329 KIVEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNERMSVESCAQAVSNLAIQFGD 508
KI +D H+ A +GL AD+R LV+RAR+ECQ++ + ++V ++ ++N +F
Sbjct: 62 KIHMIDDHVMLAFAGLSADARVLVDRARIECQSYKLTLEDPVTVAYISRYIANTKQRFTQ 121
Query: 509 SDDDSGTAMSRPFGVAVMFAGIDEKG-PQLFHMDPSGTFVQYDAKAIGSGSEGAQQSLKE 685
S RPFG++++ G D G P+LF +PSG + +Y A A G G + ++ L+E
Sbjct: 122 SPG------RRPFGISMLIGGFDHDGTPRLFKTEPSGAYYEYVANATGRGEKPVREYLEE 175
Query: 686 IYHKSMTLKEA--IKSALTILKQVM 754
Y + T+ EA +K + L QV+
Sbjct: 176 QYSEENTVDEATTLKLVVKSLAQVV 200
>AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome alpha
subunit protein 3 protein.
Length = 250
Score = 131 bits (316), Expect = 7e-31
Identities = 80/210 (38%), Positives = 121/210 (57%), Gaps = 3/210 (1%)
Frame = +2
Query: 155 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSTLMEPTTI-EK 331
YD FSPEGRL+QVEYA+EAI T +GI +SEG+V+A E++ L++ + + EK
Sbjct: 5 YDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILSSEGIVVAAERKNVHKLLDDSVMTEK 64
Query: 332 IVEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNERMSVESCAQAVSNLAIQFGDS 511
+ + +I+C V+G+ AD+ L+ R ++ Y E M VE Q V NL +
Sbjct: 65 VYRLSDNISCTVAGITADANILINHLRWWAASYRNSYGEEMPVE---QLVQNLC---NEK 118
Query: 512 DDDSGTAMSRPFGVAVMFAGIDEK-GPQLFHMDPSGTFVQYDAKAIGSGSEGAQQSLKEI 688
+ RPFGV++++ G D+ G QL+ DPSG + + A IGS + A LK+
Sbjct: 119 QRYTQIGGKRPFGVSLLYIGWDKHYGYQLYQSDPSGNYTGWKATCIGSNHQAAVTLLKQE 178
Query: 689 YHKSMTLKEAIKSALTILKQVMEEKL-SEK 775
Y KS L+EA + A+ +L + ++ KL SEK
Sbjct: 179 Y-KSPNLEEAKQLAIKVLWKTLDVKLASEK 207
>Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical
protein D1054.2 protein.
Length = 231
Score = 116 bits (280), Expect = 2e-26
Identities = 67/208 (32%), Positives = 112/208 (53%), Gaps = 2/208 (0%)
Frame = +2
Query: 155 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSTLMEPTTIEKI 334
Y + TFSP G+L Q+EYA+ A+K G ++G+ +GVVLA E + S L + K+
Sbjct: 5 YGFSLTTFSPSGKLMQIEYALNAVKNGQPSVGLRAKDGVVLATE-NVGSVLTDDQ--PKV 61
Query: 335 VEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNERMSVESCAQAVSNLAIQFGDSD 514
++ +HI C SG+ D R LV++AR + +Y E M Q V+++A +
Sbjct: 62 EQISKHIGCVYSGMGPDFRILVKKARKIAMEYEMMYGEEMPT---IQLVTDIAAVMQEYT 118
Query: 515 DDSGTAMSRPFGVAVMFAGIDEK--GPQLFHMDPSGTFVQYDAKAIGSGSEGAQQSLKEI 688
G RPFG +++ AG D+ P LF DPSG + + A A+G A+ L++
Sbjct: 119 QSGGV---RPFGASLLIAGWDKNPGRPLLFQCDPSGAYFAWKATALGKNDVNAKTFLEKR 175
Query: 689 YHKSMTLKEAIKSALTILKQVMEEKLSE 772
+ +++ L + I +AL L++ + ++E
Sbjct: 176 FSEALELDDGIHTALLTLRESFDVGMNE 203
>AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome alpha
subunit protein 6 protein.
Length = 260
Score = 108 bits (260), Expect = 4e-24
Identities = 68/213 (31%), Positives = 115/213 (53%), Gaps = 5/213 (2%)
Frame = +2
Query: 146 RSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSTLMEPTTI 325
R++YD V +SP+GRL QVEYA+EA+K GS +GI + V+ KR + L
Sbjct: 3 RNQYDGDVTVWSPQGRLHQVEYAVEAMKQGSATVGIKSETHAVIVALKRAQNDLSSHQ-- 60
Query: 326 EKIVEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNERMSVESCAQAVSNLAIQFG 505
+K+ E+D H +++GL++D R L + EC + + Y + + ++ A+++ L +Q
Sbjct: 61 KKVYEIDTHAGVSIAGLLSDGRILARYLQTECSSWRWDYKQAVPIKKLAESM-QLKLQ-- 117
Query: 506 DSDDDSGTAMSRPFGVAVMFAGIDEKGPQLFHMDPSGTFVQYDAKAIGSGSEGAQQSLK- 682
++ RPFGV ++ AG D+ G + DPS V +IG+ S+ A+ L+
Sbjct: 118 ---ANTQYYGRRPFGVGILIAGYDKDGAHIIQTDPSAEVVSMHGTSIGARSQSARTYLER 174
Query: 683 --EIYHKSMTLKEAIKSALTILKQVM--EEKLS 769
+ + KS T ++ I AL L+ + EE L+
Sbjct: 175 NVDNFEKS-TPEQLIVHALLALRDTLPAEENLN 206
>Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical
protein C15H11.7 protein.
Length = 246
Score = 97.1 bits (231), Expect = 1e-20
Identities = 60/201 (29%), Positives = 111/201 (55%), Gaps = 4/201 (1%)
Frame = +2
Query: 155 YDRGVNTFSPEGRLFQVEYAIEAIKLGS-TAIGICTSEGVVLAVEKRITSTLMEPTTIEK 331
+DR + FSPEGR++QVEYA +AI + TA+ + ++ V+AV+KR+ +L+ T+
Sbjct: 9 FDRHITIFSPEGRVYQVEYAFKAINSTNLTAVAVKGADAAVIAVQKRVPDSLIVADTVTS 68
Query: 332 IVEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNERMSVESCAQAVSNLAIQFGDS 511
+ ++ + + C G++ D++ ++RA+ E + + M E A+ +++L +
Sbjct: 69 VYQISQSVGCCAIGMIPDAKFQIKRAQGEAASWKYKNGYDMPCELLAKKMADLNQYY--- 125
Query: 512 DDDSGTAMSRPFGVAVMFAGI-DEKGPQLFHMDPSGTFVQYDAKAIGSGSEGAQQSL-KE 685
+ A R G A++F DEKGP+++ +DP+G + ++G A L K+
Sbjct: 126 ---TQNAEMRSLGCALLFISYDDEKGPEVYRVDPAGYYRGMKGVSVGVKQLPATSFLEKK 182
Query: 686 IYHKS-MTLKEAIKSALTILK 745
I KS +T EAI+ A+ L+
Sbjct: 183 IKKKSELTSTEAIELAIEALQ 203
>Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical
protein ZK945.2 protein.
Length = 250
Score = 95.5 bits (227), Expect = 4e-20
Identities = 60/203 (29%), Positives = 101/203 (49%), Gaps = 1/203 (0%)
Frame = +2
Query: 155 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSTLMEPTTIEKI 334
YD +TFSP+GR+FQVEYA +A+ T I I GVV+ +K I+S L ++
Sbjct: 8 YDLAASTFSPDGRIFQVEYAQKAVDNAGTMIAIRGKNGVVVVADKLISSKLYTDNANPRM 67
Query: 335 VEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNERMSVESCAQAVSNLAIQFGDSD 514
V+ ++ AV+G D L A E Y E M +++ A +V+
Sbjct: 68 FNVNDNVGVAVAGNYPDGFALKNYAYGEAMKWLKDYREPMPIQNIANSVAEYI------- 120
Query: 515 DDSGTAMSRPFGVAVMFAGIDEK-GPQLFHMDPSGTFVQYDAKAIGSGSEGAQQSLKEIY 691
+SRPFG F +++ G +LF ++PSG +Y A A+G + A+ ++++
Sbjct: 121 HIHTLGISRPFGAGAFFMSWNKQTGGRLFLVEPSGLNYEYKAWAVGKHRQAAKAEIEKLK 180
Query: 692 HKSMTLKEAIKSALTILKQVMEE 760
+ + + + +K A I+ V +E
Sbjct: 181 IEELDVNQLVKEAARIIMVVRDE 203
>Z81564-1|CAB04567.1| 284|Caenorhabditis elegans Hypothetical
protein K05C4.1 protein.
Length = 284
Score = 50.8 bits (116), Expect = 1e-06
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 1/157 (0%)
Frame = +2
Query: 266 GVVLAVEKRITS-TLMEPTTIEKIVEVDRHIACAVSGLMADSRTLVERARVECQNHWFVY 442
G+++AV+ R +S + ++ KI+++ + ++G AD + C +
Sbjct: 82 GIIVAVDSRASSGEYISSKSVMKILDIGDRMVATMAGGAADCQFWTRIVAKYCTLYELRE 141
Query: 443 NERMSVESCAQAVSNLAIQFGDSDDDSGTAMSRPFGVAVMFAGIDEKGPQLFHMDPSGTF 622
++V + ++ +N + G +S V M AG D+KGPQ+F +D G
Sbjct: 142 KTSITVSAASKYFANTLYGY------RGQGLS----VGSMVAGYDKKGPQIFKVDSEGDR 191
Query: 623 VQYDAKAIGSGSEGAQQSLKEIYHKSMTLKEAIKSAL 733
Q ++GSGS A L Y MT EA K L
Sbjct: 192 CQLKVCSVGSGSLNAYGILDNHYKPKMTDDEARKLGL 228
>AC006672-3|AAK84540.1| 239|Caenorhabditis elegans Proteasome beta
subunit protein 1 protein.
Length = 239
Score = 41.1 bits (92), Expect = 0.001
Identities = 37/171 (21%), Positives = 74/171 (43%), Gaps = 2/171 (1%)
Frame = +2
Query: 209 YAIEAIKLGSTAIGICTSEGVVLAVEKRITS-TLMEPTTIEKIVEVDRHIACAVSGLMAD 385
Y E I G+T I + + GVV+ + R ++ + + KI + ++ SG AD
Sbjct: 15 YPQEEISTGTTLIAMEYNGGVVVGTDSRTSAGSFITSRATNKITPITDNMVVCRSGSAAD 74
Query: 386 SRTLVERARVECQNHWFVYNERMSVESCAQAVSNLAIQFGDSDDDSGTAMSRPFGVAVMF 565
++ + + A+ + N+ +++ +Q + + +V+
Sbjct: 75 TQAIADIAKYHIDVYTMTENKPVTIYRSSQIFRQFLYNYREQ-----------LSASVLV 123
Query: 566 AGIDEK-GPQLFHMDPSGTFVQYDAKAIGSGSEGAQQSLKEIYHKSMTLKE 715
AG DE+ G Q++ + G + + A GSGS Q L + ++TL+E
Sbjct: 124 AGWDEELGGQVYAIPIGGFVSRQRSTASGSGSTFVQGFLDSQWRPNLTLEE 174
>U55855-2|AAA98018.1| 204|Caenorhabditis elegans Proteasome beta
subunit protein 3 protein.
Length = 204
Score = 38.3 bits (85), Expect = 0.007
Identities = 39/178 (21%), Positives = 76/178 (42%), Gaps = 3/178 (1%)
Frame = +2
Query: 233 GSTAIGICTSEGVVLAVEKRITSTLMEPTTIEKIV-EVDRHIACAVSGLMADSRTLVERA 409
G T + + E V +A + RI + T +K V +V + ++G +D+RT++E+
Sbjct: 8 GGTVVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKVTDKVYVGLAGFQSDARTVLEKI 67
Query: 410 RVECQNHWFVYNERMSVESCAQAVSNLAIQFGDSDDDSGTAMSRPFGVAVMFAGIDEKG- 586
+ N + + ++ +SNLA Q G+ + P + AG+D+
Sbjct: 68 MFRKNLYELRENRNIKPQVLSEMISNLAYQ-----HRFGSYFTEP-----LVAGLDDTNK 117
Query: 587 PQLFHMDPSG-TFVQYDAKAIGSGSEGAQQSLKEIYHKSMTLKEAIKSALTILKQVME 757
P + MD G D A+G+G E + + ++M E ++ + +E
Sbjct: 118 PYICCMDTIGCVSAPRDFVAVGTGQEYLLGVCENFWRENMKPDELFEATAQSILSCLE 175
>Z99709-4|CAB16855.1| 277|Caenorhabditis elegans Hypothetical
protein C47B2.4 protein.
Length = 277
Score = 37.1 bits (82), Expect = 0.015
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +2
Query: 548 GVAVMFAGIDEKGPQLFHMDPSGTFVQYDAKAIGSGSEGAQQSLKEIYHKSMTLKEAIK 724
G ++ G+D GP L+ +GT + + A GSGS A L+ + MT EA K
Sbjct: 141 GAYLLIGGVDPTGPHLYMCSANGTTMAFPFTAQGSGSYAAITILERDFKVDMTKDEAEK 199
>L14745-10|AAK71356.1| 258|Caenorhabditis elegans Proteasome beta
subunit protein 6 protein.
Length = 258
Score = 33.9 bits (74), Expect = 0.14
Identities = 37/144 (25%), Positives = 58/144 (40%), Gaps = 4/144 (2%)
Frame = +2
Query: 233 GSTAIGICTSEGVVLAVEKRITSTLMEPTT--IEKIVEVDRHIACAVSGLMADSRTLVER 406
G + I ++A + R+T + T EKI ++ +I SG D L +
Sbjct: 51 GGSTCAISGENFAIVASDTRMTQNDINILTRDAEKIQILNDNIILTTSGFYGDVLQLKKV 110
Query: 407 ARVECQNHWFVYNERMSVESCAQAVS-NLAIQFGDSDDDSGTAMSRPFGVAVMFAGIDEK 583
+ + F Y MSV+ CA+ +S NL + P+ + AGIDE
Sbjct: 111 LQSRLHKYRFDYRSDMSVDLCAELLSRNLYYR-----------RFFPYYTGAILAGIDEH 159
Query: 584 GP-QLFHMDPSGTFVQYDAKAIGS 652
G +F DP G + A G+
Sbjct: 160 GKGAVFSYDPIGCIERLGYSASGA 183
>AF303265-1|AAG50223.1| 258|Caenorhabditis elegans proteasome
component C5 protein.
Length = 258
Score = 33.9 bits (74), Expect = 0.14
Identities = 37/144 (25%), Positives = 58/144 (40%), Gaps = 4/144 (2%)
Frame = +2
Query: 233 GSTAIGICTSEGVVLAVEKRITSTLMEPTT--IEKIVEVDRHIACAVSGLMADSRTLVER 406
G + I ++A + R+T + T EKI ++ +I SG D L +
Sbjct: 51 GGSTCAISGENFAIVASDTRMTQNDINILTRDAEKIQILNDNIILTTSGFYGDVLQLKKV 110
Query: 407 ARVECQNHWFVYNERMSVESCAQAVS-NLAIQFGDSDDDSGTAMSRPFGVAVMFAGIDEK 583
+ + F Y MSV+ CA+ +S NL + P+ + AGIDE
Sbjct: 111 LQSRLHKYRFDYRSDMSVDLCAELLSRNLYYR-----------RFFPYYTGAILAGIDEH 159
Query: 584 GP-QLFHMDPSGTFVQYDAKAIGS 652
G +F DP G + A G+
Sbjct: 160 GKGAVFSYDPIGCIERLGYSASGA 183
>AF098985-5|AAC67418.1| 99|Caenorhabditis elegans Hypothetical
protein C08G5.5 protein.
Length = 99
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/43 (27%), Positives = 25/43 (58%)
Frame = -2
Query: 389 WSRPLDPKRRKRCVDLLQQSFRWSWVPSKLKLSFFPPPKQLPP 261
+ +PLDP+ +RC+ ++++ + + ++ PPP LPP
Sbjct: 7 YDKPLDPEDVRRCLKKVRENQAAREMAREPLVTHLPPPSGLPP 49
>Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical
protein F10F2.1 protein.
Length = 2507
Score = 29.1 bits (62), Expect = 4.0
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = -2
Query: 701 STCDKSPSNSAGHLHCQNQWPWHHTAQMYHSGPYETVEGLSHQCLQT--*QQHQMAVTWL 528
ST ++ P NS LH + P H +A ++ S P + G+ ++T QQ TWL
Sbjct: 277 STKEQWPPNSLKLLHVLKEMPQHDSADVFFSFPGKDQSGIILPPIKTMPYQQGWTFATWL 336
>Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical
protein F10F2.1 protein.
Length = 2507
Score = 29.1 bits (62), Expect = 4.0
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = -2
Query: 701 STCDKSPSNSAGHLHCQNQWPWHHTAQMYHSGPYETVEGLSHQCLQT--*QQHQMAVTWL 528
ST ++ P NS LH + P H +A ++ S P + G+ ++T QQ TWL
Sbjct: 277 STKEQWPPNSLKLLHVLKEMPQHDSADVFFSFPGKDQSGIILPPIKTMPYQQGWTFATWL 336
>AF026209-8|AAB71275.2| 328|Caenorhabditis elegans Seven tm
receptor protein 134 protein.
Length = 328
Score = 29.1 bits (62), Expect = 4.0
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -3
Query: 520 IIVTVSKLYS*VGNGLST*FYTHTLI-VHKPVVLTFNSGPFN*GPGVGH 377
+++T S LYS V N + TH L+ + K V + N GPF PG G+
Sbjct: 41 LMITFS-LYSVVYNYVD--IITHPLVLIEKQVFVVINHGPFRYTPGFGY 86
>AC024796-10|AAK29896.1| 623|Caenorhabditis elegans Hypothetical
protein Y48G1C.7 protein.
Length = 623
Score = 29.1 bits (62), Expect = 4.0
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +2
Query: 533 MSRPFGVAVMFAGIDEKGPQLFHMDPSGTFVQYDAKAIGSGSEGAQQSLKEIYHKS-MTL 709
++ FGV +M + G HM P G V+ + G+ G +L+E H++ +
Sbjct: 501 VNHTFGVEIMAGEEMDNGEMHLHMAPDGAIVEEIVEEEVIGTVGDDVNLEEEVHENEPKV 560
Query: 710 KEAIKSALTILKQVMEEK 763
K +L+QV+ E+
Sbjct: 561 YTGEKQINDVLEQVVVEE 578
>Z92825-3|CAB07311.1| 531|Caenorhabditis elegans Hypothetical
protein C13C4.5 protein.
Length = 531
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = -1
Query: 393 VLESAIR--PETAQAMCRSTSTIFSMVVGSIKVEVILFSTAKTT 268
++ AIR +TAQA +S T F + VG++ + VILF + T
Sbjct: 444 LISDAIRGNEDTAQAHYKSLVTSFWLCVGTLVLSVILFGISAIT 487
>Z81562-8|CAN99692.1| 1817|Caenorhabditis elegans Hypothetical protein
C18D4.2a protein.
Length = 1817
Score = 28.7 bits (61), Expect = 5.3
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Frame = +2
Query: 110 HLEYPNSKMFLTRSEYDRGVNTFSP--EGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAV 283
H +Y N + T+ EY++ ++ F E L V + I L A C ++ VL V
Sbjct: 1601 HPDYQNRPITYTQDEYEQRIDLFVKYFEDILSSVGHTIPVEALYMQA---C-NQNTVLRV 1656
Query: 284 EKRITSTLMEPTTIEKIVEVDRHIAC 361
+ + S L++ +I KIVE D+ C
Sbjct: 1657 LRHLDSRLLKTISI-KIVEDDQDKPC 1681
>Z81474-9|CAN99684.1| 1817|Caenorhabditis elegans Hypothetical protein
C18D4.2a protein.
Length = 1817
Score = 28.7 bits (61), Expect = 5.3
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Frame = +2
Query: 110 HLEYPNSKMFLTRSEYDRGVNTFSP--EGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAV 283
H +Y N + T+ EY++ ++ F E L V + I L A C ++ VL V
Sbjct: 1601 HPDYQNRPITYTQDEYEQRIDLFVKYFEDILSSVGHTIPVEALYMQA---C-NQNTVLRV 1656
Query: 284 EKRITSTLMEPTTIEKIVEVDRHIAC 361
+ + S L++ +I KIVE D+ C
Sbjct: 1657 LRHLDSRLLKTISI-KIVEDDQDKPC 1681
>Z75540-1|CAA99847.2| 1227|Caenorhabditis elegans Hypothetical protein
F37D6.1 protein.
Length = 1227
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = -3
Query: 733 ECRLDGLFEGHRLVINLLQTLLGTFTARTNGLGIILHKCTTRVHMKQLRAFLINACK 563
E R +G F R VI+L G F++ G I+H + V + L+ ++ A K
Sbjct: 1123 ENRQNGAFSDWRCVIHLDDKRAGVFSSILEAGGAIVHSISEYVEVSTLKPNIVLASK 1179
>Z80219-7|CAN86594.1| 804|Caenorhabditis elegans Hypothetical
protein T01H8.1e protein.
Length = 804
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -3
Query: 283 HRQNNSLRSTNANCSGAKFDSFYGVFHLEQP 191
HR + S+RS +CS ++F+ H+ QP
Sbjct: 30 HRMDVSMRSDPTDCSSDTTNTFHSSIHIIQP 60
>Z80219-5|CAB02302.2| 784|Caenorhabditis elegans Hypothetical
protein T01H8.1a protein.
Length = 784
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -3
Query: 283 HRQNNSLRSTNANCSGAKFDSFYGVFHLEQP 191
HR + S+RS +CS ++F+ H+ QP
Sbjct: 36 HRMDVSMRSDPTDCSSDTTNTFHSSIHIIQP 66
>Z75546-12|CAN86896.1| 804|Caenorhabditis elegans Hypothetical
protein T01H8.1e protein.
Length = 804
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -3
Query: 283 HRQNNSLRSTNANCSGAKFDSFYGVFHLEQP 191
HR + S+RS +CS ++F+ H+ QP
Sbjct: 30 HRMDVSMRSDPTDCSSDTTNTFHSSIHIIQP 60
>Z75546-10|CAA99896.2| 784|Caenorhabditis elegans Hypothetical
protein T01H8.1a protein.
Length = 784
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -3
Query: 283 HRQNNSLRSTNANCSGAKFDSFYGVFHLEQP 191
HR + S+RS +CS ++F+ H+ QP
Sbjct: 36 HRMDVSMRSDPTDCSSDTTNTFHSSIHIIQP 66
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,010,020
Number of Sequences: 27780
Number of extensions: 492975
Number of successful extensions: 1345
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1332
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2040452812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -