Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt19a17
(825 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 26 0.37
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 24 2.0
L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein. 23 2.6
DQ485319-1|ABF21078.1| 175|Apis mellifera icarapin variant 2 pr... 23 3.4
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 4.5
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 4.5
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 22 6.0
AF393494-1|AAL60419.1| 144|Apis mellifera odorant binding prote... 22 6.0
AF166496-1|AAD51944.1| 144|Apis mellifera pheromone-binding pro... 22 6.0
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 22 6.0
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 22 7.9
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 22 7.9
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 26.2 bits (55), Expect = 0.37
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = -1
Query: 225 IASMAYSTWNSL-PSGLNVLTPRSYSERVRNILLLGYS 115
++S + W L SG+ TPRS+S RV ++ G++
Sbjct: 610 LSSAVWFAWGVLLNSGIGEGTPRSFSARVLGMVWAGFA 647
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 23.8 bits (49), Expect = 2.0
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +2
Query: 587 PQLFHMDPSGTFVQYDAKAIGSGSEGAQQSLKEIYHKSMTLKEAIKSALTILK 745
P+L + PSG+ V D+ S Q S KS T +E + +AL L+
Sbjct: 373 PELLGLMPSGSSVHSDSGENNSRGHSGQSSSHHHGSKSWT-QEDMDAALEALR 424
>L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein.
Length = 382
Score = 23.4 bits (48), Expect = 2.6
Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 3/48 (6%)
Frame = -2
Query: 617 YHSGPY---ETVEGLSHQCLQT*QQHQMAVTWLFRYHRHCLQTV*LSW 483
Y++ PY T S QC T Q ++WLF L +V L W
Sbjct: 215 YYAYPYCYNLTPNQPSAQCEATTMQENDKMSWLFESEDVLLPSVYLRW 262
>DQ485319-1|ABF21078.1| 175|Apis mellifera icarapin variant 2
precursor protein.
Length = 175
Score = 23.0 bits (47), Expect = 3.4
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = -1
Query: 288 FSTAKTTPSEVQMPIAVEPSLIASMAYSTWNSLPSGLN 175
+ T +T +V+ +A S I WN +P G N
Sbjct: 41 YQTLQTHMKKVREQMAGILSRIPEQGVVNWNKIPEGAN 78
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 22.6 bits (46), Expect = 4.5
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = -2
Query: 380 PLDPKRRKRCVDLLQQSFRWSWVP 309
P P RC L QS + SW P
Sbjct: 1111 PSIPPEDVRCAALTSQSLQVSWQP 1134
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.6 bits (46), Expect = 4.5
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = -2
Query: 380 PLDPKRRKRCVDLLQQSFRWSWVP 309
P P RC L QS + SW P
Sbjct: 1107 PSIPPEDVRCAALTSQSLQVSWQP 1130
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 22.2 bits (45), Expect = 6.0
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -2
Query: 368 KRRKRCVDLLQQSFRWSWVPSKLK 297
K K ++ + SF+++WV KLK
Sbjct: 41 KFEKEAQEMGKGSFKYAWVLDKLK 64
>AF393494-1|AAL60419.1| 144|Apis mellifera odorant binding protein
ASP1 protein.
Length = 144
Score = 22.2 bits (45), Expect = 6.0
Identities = 11/37 (29%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -1
Query: 816 GTMIQE-SLSLLQHCFSESFSSMTCFSMVSADLMASL 709
G ++ E S++ +C E+FS + + V D+M L
Sbjct: 62 GNLVNEPSITCYMYCLLEAFSLVDDEANVDEDIMLGL 98
>AF166496-1|AAD51944.1| 144|Apis mellifera pheromone-binding
protein ASP1 protein.
Length = 144
Score = 22.2 bits (45), Expect = 6.0
Identities = 11/37 (29%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -1
Query: 816 GTMIQE-SLSLLQHCFSESFSSMTCFSMVSADLMASL 709
G ++ E S++ +C E+FS + + V D+M L
Sbjct: 62 GNLVNEPSITCYMYCLLEAFSLVDDEANVDEDIMLGL 98
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 22.2 bits (45), Expect = 6.0
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -2
Query: 368 KRRKRCVDLLQQSFRWSWVPSKLK 297
K K ++ + SF+++WV KLK
Sbjct: 41 KFEKEAQEMGKGSFKYAWVLDKLK 64
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 21.8 bits (44), Expect = 7.9
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -2
Query: 284 PPPKQLPPKYK 252
PPP+Q PP K
Sbjct: 394 PPPRQTPPSRK 404
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 21.8 bits (44), Expect = 7.9
Identities = 12/44 (27%), Positives = 18/44 (40%)
Frame = -2
Query: 665 HLHCQNQWPWHHTAQMYHSGPYETVEGLSHQCLQT*QQHQMAVT 534
HL Q + Q + ++ G+ + Q QQHQ VT
Sbjct: 194 HLQAHEQHMMYQQQQQSQAASQQSQPGMHPRQQQQAQQHQGVVT 237
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 249,952
Number of Sequences: 438
Number of extensions: 6027
Number of successful extensions: 22
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26338809
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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