Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt19a11
(736 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC688.04c |gst3||glutathione S-transferase |Schizosaccharomyce... 44 3e-05
SPAC17A5.15c |||glutamate-tRNA ligase |Schizosaccharomyces pombe... 38 0.001
SPCC1442.04c |||conserved fungal protein|Schizosaccharomyces pom... 28 1.2
SPCC4F11.04c |||mannosyltransferase complex subunit |Schizosacch... 28 1.2
SPCC14G10.02 ||SPCC18B5.13|ribosome biogenesis protein Urb1|Schi... 27 3.7
SPBC365.07c |||TATA element modulatory factor homolog |Schizosac... 27 3.7
SPAC1002.01 ||SPAC1610.05|conserved fungal protein|Schizosacchar... 26 4.8
SPAC23D3.06c |nup146||nucleoporin Nup146|Schizosaccharomyces pom... 26 6.4
SPBC29A10.01 |ccr1|SPBC365.17|NADPH-cytochrome p450 reductase |S... 25 8.5
SPAC3H5.11 |||NAD/NADH kinase |Schizosaccharomyces pombe|chr 1||... 25 8.5
>SPAC688.04c |gst3||glutathione S-transferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 242
Score = 43.6 bits (98), Expect = 3e-05
Identities = 27/108 (25%), Positives = 48/108 (44%)
Frame = +3
Query: 351 SLILEDEIPKSVEYLDKTLGPLTYLVGETLSVSDFAVFSVLYVSSKFKEISKVIPSQNIR 530
S L E +++Y+D L Y GE + +D + ++ + + K P +NI+
Sbjct: 137 SKYLSKETFLNLDYIDNHLASNEYFAGEQFTAADPQMCFPIFAAQRDYLSQK--PYKNIK 194
Query: 531 RWMKLVEAQPQVQTAIKALPSDALDKLTKVSSRKSPPTNAESGGRQQE 674
RWM++V +P + A + + + L + V PPT R E
Sbjct: 195 RWMRVVSDRPACRIAAEKVEDNTLTLFSDVERYSHPPTPPPEQVRSDE 242
>SPAC17A5.15c |||glutamate-tRNA ligase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 716
Score = 38.3 bits (85), Expect = 0.001
Identities = 33/122 (27%), Positives = 55/122 (45%)
Frame = +3
Query: 369 EIPKSVEYLDKTLGPLTYLVGETLSVSDFAVFSVLYVSSKFKEISKVIPSQNIRRWMKLV 548
E+ + LD L + VG +L+ +DF+++ L ++ + N+ RW K +
Sbjct: 106 ELSSLLAQLDDHLIMRSLFVGYSLTSADFSIWGALKSNNMAAGAVRTGQYFNLARWYKFM 165
Query: 549 EAQPQVQTAIKALPSDALDKLTKVSSRKSPPTNAESGGRQQEGKFIELPHAEMGKVVVRF 728
++Q V + + K +S ++ +S G E I LP A GKVV RF
Sbjct: 166 DSQNAVSVTM-----EEFTKAVNISKKQ------KSSGPNYE---IGLPDAIDGKVVTRF 211
Query: 729 PP 734
PP
Sbjct: 212 PP 213
>SPCC1442.04c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 409
Score = 28.3 bits (60), Expect = 1.2
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 174 SSAKEIDIVWENDSVIILPNSTKPVPFGTSND 269
S A+ D W + ++I PNS++ +G +ND
Sbjct: 195 SEAETRDFNWLSKGIVIFPNSSECAFYGNNND 226
>SPCC4F11.04c |||mannosyltransferase complex subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 345
Score = 28.3 bits (60), Expect = 1.2
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = +3
Query: 210 DSVIILPNSTKPV-PFGTSNDLIRILENT--FNKSVSPLEKVTMNHWLSFSLILEDEIPK 380
DS++ P + P G SND++ + + F + LEK ++WL + I+ P
Sbjct: 175 DSLLYYPVWVRRTDPVGVSNDVMGSVPHHPYFELIIQNLEKNAKSYWLPYLTIMLSTGPL 234
Query: 381 SVEYL 395
S+ +L
Sbjct: 235 SISFL 239
>SPCC14G10.02 ||SPCC18B5.13|ribosome biogenesis protein
Urb1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1568
Score = 26.6 bits (56), Expect = 3.7
Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Frame = -1
Query: 358 IRLKDNQ*FIVTFSSGLTDLLKV-FSRILI 272
+RL D+Q F+ +SS +DLLK SRIL+
Sbjct: 413 LRLPDSQTFVQLYSSTESDLLKEGLSRILL 442
>SPBC365.07c |||TATA element modulatory factor homolog
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 547
Score = 26.6 bits (56), Expect = 3.7
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -1
Query: 469 TLKTAKSDTDKVSPTK*VSGPSVLSK 392
TLK K D D +PT + PS +SK
Sbjct: 289 TLKVTKEDEDPTTPTNAIPIPSSMSK 314
>SPAC1002.01 ||SPAC1610.05|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 179
Score = 26.2 bits (55), Expect = 4.8
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = -3
Query: 371 FIFQYKTERQP-MIHCDFLKWTHRLVKGIFKNSNQIIASPKWHWFGGIWKNNN*VILPND 195
FI Q K + I D W RL+K K ++Q P H F ++ + ILP
Sbjct: 43 FILQEKVQSSNHTIRSDTKLWK-RLLKITGKQAHQFKDKPFSHIFAFLFLHELSAILPLP 101
Query: 194 VYFFCRRSV 168
++FF S+
Sbjct: 102 IFFFIFHSL 110
>SPAC23D3.06c |nup146||nucleoporin Nup146|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1325
Score = 25.8 bits (54), Expect = 6.4
Identities = 36/162 (22%), Positives = 66/162 (40%), Gaps = 3/162 (1%)
Frame = +3
Query: 168 YRSSAKEIDIVWENDSVI---ILPNSTKPVPFGTSNDLIRILENTFNKSVSPLEKVTMNH 338
Y E+D+VW+N ++I I ++ P + + +NT + L+ VT
Sbjct: 1081 YLQFKNELDLVWQNINIIAEYIEGQTSTPSAVSEQATMAMLSQNT-EELEDLLDTVT--- 1136
Query: 339 WLSFSLILEDEIPKSVEYLDKTLGPLTYLVGETLSVSDFAVFSVLYVSSKFKEISKVIPS 518
SFS D K ++YL+ L + + + V+ K E+ ++ P
Sbjct: 1137 --SFSAFCSD-YSKQIDYLEAC---LVRINAKRIQVTRLLKALTNPAFEKQMELRQLGP- 1189
Query: 519 QNIRRWMKLVEAQPQVQTAIKALPSDALDKLTKVSSRKSPPT 644
+ +RR +L +V ++ L A+D + R PT
Sbjct: 1190 EALRRQKELRLKMEKVLKSLSTLEQQAVDARMSDTRRFKKPT 1231
>SPBC29A10.01 |ccr1|SPBC365.17|NADPH-cytochrome p450 reductase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 678
Score = 25.4 bits (53), Expect = 8.5
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = +3
Query: 450 DFAVFSVLYVSSKFKEISKVIPSQNIRRWMKLVEAQPQVQTAIKALPSDALDKLTKVS 623
D A + Y + + I + PSQ + ++++ + + T I P D LDK +S
Sbjct: 293 DIADSGMRYQTGDYASICPMNPSQAVDDLLEVLGLKEKRDTVIIVKPIDTLDKAPVLS 350
>SPAC3H5.11 |||NAD/NADH kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 393
Score = 25.4 bits (53), Expect = 8.5
Identities = 14/67 (20%), Positives = 32/67 (47%)
Frame = +3
Query: 351 SLILEDEIPKSVEYLDKTLGPLTYLVGETLSVSDFAVFSVLYVSSKFKEISKVIPSQNIR 530
S + + +P + + TLG LT+ + S + + +YV + + +V+ +N
Sbjct: 157 SRLFQRTVPPIMPFAMGTLGFLTHFDVKKYKTSILEICNEMYVHLRTRFECRVMKKKNRT 216
Query: 531 RWMKLVE 551
+W+ + E
Sbjct: 217 QWINIDE 223
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,161,521
Number of Sequences: 5004
Number of extensions: 67684
Number of successful extensions: 180
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 180
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 347244562
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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