Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt19a11
         (736 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75714-3|CAB00060.1| 1149|Caenorhabditis elegans Hypothetical pr...    47   1e-05
Z72507-7|CAD56569.1|  373|Caenorhabditis elegans Hypothetical pr...    39   0.004
Z72507-6|CAA96631.1|  398|Caenorhabditis elegans Hypothetical pr...    39   0.004
AC119287-1|AAO38568.1|  218|Caenorhabditis elegans Glutathione s...    30   2.0  
AC006603-1|AAF39749.1|  772|Caenorhabditis elegans Hypothetical ...    30   2.0  
U41016-1|AAA82318.1|  203|Caenorhabditis elegans Glutathione s-t...    29   3.4  
AC006776-7|AAF60623.1|  361|Caenorhabditis elegans Serpentine re...    29   4.5  
Z68120-3|CAA92201.1|  266|Caenorhabditis elegans Hypothetical pr...    28   7.9  
U21321-2|AAG00050.1|  489|Caenorhabditis elegans Cytochrome p450...    28   7.9  
AC119287-2|AAM19064.2|  218|Caenorhabditis elegans Glutathione s...    28   7.9  

>Z75714-3|CAB00060.1| 1149|Caenorhabditis elegans Hypothetical
           protein ZC434.5 protein.
          Length = 1149

 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 39/109 (35%), Positives = 58/109 (53%), Gaps = 3/109 (2%)
 Frame = +3

Query: 417 TYLVGETLSVSDFAVFSVLYVSSKFK-EISKVIPSQNIRRWMKLVEAQPQVQTAIKALPS 593
           T ++  +L+V+DFA+FSV + + + K + S +I           V  +P +  A   +  
Sbjct: 109 TKILDNSLTVADFAIFSVAHNNPQLKAKFSGIIDK---------VLKEPTLAAAHNFV-- 157

Query: 594 DALDKLTKVSSRKSPPTNAESGG--RQQEGKFIELPHAEMGKVVVRFPP 734
             L K     S  +P   A +G   ++ EGKF+ELP AE GKVVVRFPP
Sbjct: 158 -GLYK-----SAAAPTATASTGKEKKKDEGKFVELPGAEKGKVVVRFPP 200


>Z72507-7|CAD56569.1|  373|Caenorhabditis elegans Hypothetical
           protein F17C11.9b protein.
          Length = 373

 Score = 38.7 bits (86), Expect = 0.004
 Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
 Frame = +3

Query: 363 EDEIPKSVEYLDKTLGPLTYLVGETLSVSDFAVFSVLYVSSKFKEISKVIPS-QNIRRWM 539
           ++E+   ++ LD+ L   TYLVGE LS++D +V   L  + ++   +    S  N+ RW 
Sbjct: 85  KNELNGQLQVLDRVLVKKTYLVGERLSLADVSVALDLLPAFQYVLDANARKSIVNVTRWF 144

Query: 540 KLVEAQPQVQTAI 578
           + V  QP V+  +
Sbjct: 145 RTVVNQPAVKEVL 157


>Z72507-6|CAA96631.1|  398|Caenorhabditis elegans Hypothetical
           protein F17C11.9a protein.
          Length = 398

 Score = 38.7 bits (86), Expect = 0.004
 Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
 Frame = +3

Query: 363 EDEIPKSVEYLDKTLGPLTYLVGETLSVSDFAVFSVLYVSSKFKEISKVIPS-QNIRRWM 539
           ++E+   ++ LD+ L   TYLVGE LS++D +V   L  + ++   +    S  N+ RW 
Sbjct: 110 KNELNGQLQVLDRVLVKKTYLVGERLSLADVSVALDLLPAFQYVLDANARKSIVNVTRWF 169

Query: 540 KLVEAQPQVQTAI 578
           + V  QP V+  +
Sbjct: 170 RTVVNQPAVKEVL 182


>AC119287-1|AAO38568.1|  218|Caenorhabditis elegans Glutathione
           s-transferase protein34 protein.
          Length = 218

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
 Frame = +3

Query: 420 YLVGETLSVSDFAVFSVLYVSSKFKEISKVIPSQ-NIRRWMKLVEAQPQVQTAIKALP 590
           YLVG+ L+ +D  V   LY  +  KE+    P   N++++ + +   P+++  I+  P
Sbjct: 157 YLVGDGLTWADLVVADHLYSLTNIKELDPEDPIHLNLKKYQERIFNLPELKDYIETRP 214


>AC006603-1|AAF39749.1|  772|Caenorhabditis elegans Hypothetical
           protein B0524.4 protein.
          Length = 772

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 29/134 (21%), Positives = 61/134 (45%), Gaps = 4/134 (2%)
 Frame = +3

Query: 240 KPVPFGTSNDLIRILENTFNKSVS--PLEKVTMNHWLSFSLILEDEIPKSVEYLDKTLGP 413
           K V   T++  ++ L++   + V+   +EK+ + H  S   +    +PK  EY+ K    
Sbjct: 226 KDVEKYTTDASLKTLDSVLPELVAFQKIEKIVLVHSTSHGTVDPSLVPKLDEYVSKIQSV 285

Query: 414 LTYLVGETLSVSDFAVFSVLYVSSKFKEISKVIPS--QNIRRWMKLVEAQPQVQTAIKAL 587
            T +   TL+  +  VF+ L      K +S+   +  + I+    + E   +V  AI + 
Sbjct: 286 GTSVNTSTLNALNQIVFADLKDDWVKKVVSRQADALLKAIKPLRNVTEEFKKVSVAIGSA 345

Query: 588 PSDALDKLTKVSSR 629
            SD  +++  + ++
Sbjct: 346 SSDGYNEIVHIGTK 359


>U41016-1|AAA82318.1|  203|Caenorhabditis elegans Glutathione
           s-transferase protein11 protein.
          Length = 203

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 18/58 (31%), Positives = 34/58 (58%)
 Frame = +3

Query: 420 YLVGETLSVSDFAVFSVLYVSSKFKEISKVIPSQNIRRWMKLVEAQPQVQTAIKALPS 593
           Y VG+ +S +D A+F + +  +     SK++P   +R++ KL E   ++ TAI ++ S
Sbjct: 143 YFVGDKISYADLAIFHIFWFMN-----SKILPGA-LRKYPKLQEFIEKI-TAIDSIKS 193


>AC006776-7|AAF60623.1|  361|Caenorhabditis elegans Serpentine
           receptor, class w protein100 protein.
          Length = 361

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
 Frame = +3

Query: 96  KYSMMRVSCNRSNPPLGGLMAVEFYRSSAKEIDIVWENDSVIILPNSTKPVPFGTSNDLI 275
           K S+ R  CN S P +G LMAV  +  SA  +  V+     +++ N + P+P   +    
Sbjct: 130 KLSISRF-CNWSKPRVGWLMAVILFFLSA--LLSVFYQFRFVVIENRSFPLPQVCAQYQN 186

Query: 276 RILENTFNKSVSPL----EKVTMNHWLSFSLILEDEIP 377
                 F+ ++SPL    +++ +  +L F +I+   +P
Sbjct: 187 TNNVPKFSVALSPLFSNNDRIVLRAYLLFDIIVSKFLP 224


>Z68120-3|CAA92201.1|  266|Caenorhabditis elegans Hypothetical
           protein T24C2.3 protein.
          Length = 266

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 17/62 (27%), Positives = 30/62 (48%)
 Frame = +3

Query: 357 ILEDEIPKSVEYLDKTLGPLTYLVGETLSVSDFAVFSVLYVSSKFKEISKVIPSQNIRRW 536
           +L DEIPK++   D     +T L+  T + +D      L V S   + ++  P  + +RW
Sbjct: 76  VLADEIPKTIADFDICKKSVTTLINRTKNYTD-TTLGQLEVLSAVVQGNRKQPIGDSKRW 134

Query: 537 MK 542
            +
Sbjct: 135 TR 136


>U21321-2|AAG00050.1|  489|Caenorhabditis elegans Cytochrome p450
           family protein 44A1 protein.
          Length = 489

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +3

Query: 534 WMKLVEAQPQVQTAIKALPSDALDKLTKVSSRKS 635
           W K+V+ + Q  + +  L  DALDKL KV+   S
Sbjct: 248 WRKMVDLEDQFYSEVDRLMDDALDKL-KVNDSDS 280


>AC119287-2|AAM19064.2|  218|Caenorhabditis elegans Glutathione
           s-transferase protein35 protein.
          Length = 218

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
 Frame = +3

Query: 420 YLVGETLSVSDFAVFSVLYVSSKFKEISKVIPSQNI-RRWMKLVEAQPQVQTAIKALP 590
           +LVG  L+ +D  V   ++  S  KE+    P+  I + + + +   P+++  IK  P
Sbjct: 157 FLVGNGLTYADLVVADHMFTLSNIKELDSEDPTHKILKDFQEKIYGLPELKDYIKNRP 214


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,141,799
Number of Sequences: 27780
Number of extensions: 360972
Number of successful extensions: 1024
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1024
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)