Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt19a11
(736 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 27 0.18
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 26 0.32
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 26 0.32
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 22 5.2
AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 22 5.2
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 6.9
M29490-1|AAA27725.1| 109|Apis mellifera protein ( Bee homeobox-... 21 9.1
DQ435328-1|ABD92643.1| 143|Apis mellifera OBP11 protein. 21 9.1
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 21 9.1
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 21 9.1
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 21 9.1
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 27.1 bits (57), Expect = 0.18
Identities = 17/74 (22%), Positives = 35/74 (47%)
Frame = +3
Query: 177 SAKEIDIVWENDSVIILPNSTKPVPFGTSNDLIRILENTFNKSVSPLEKVTMNHWLSFSL 356
S+ +++ W NDS + +++ P G S+ ++F SVSP + N+ L
Sbjct: 60 SSGGVELGWFNDSAAAITSTSPSYPGGGSSSPSPSSPSSFFSSVSPTSLGSENYTGISDL 119
Query: 357 ILEDEIPKSVEYLD 398
+ D++ + L+
Sbjct: 120 FVFDDLNDYINRLN 133
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 26.2 bits (55), Expect = 0.32
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +1
Query: 595 MPLTNLPKFPPGNHHQQMLNQEVDNRKESSLNSLML 702
MP + +P + PGNH Q L K + ++ L
Sbjct: 334 MPPSGIPNWVPGNHDQLRLVSRFGEEKARMITTMSL 369
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 26.2 bits (55), Expect = 0.32
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +1
Query: 595 MPLTNLPKFPPGNHHQQMLNQEVDNRKESSLNSLML 702
MP + +P + PGNH Q L K + ++ L
Sbjct: 334 MPPSGIPNWVPGNHDQLRLVSRFGEEKARMITTMSL 369
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 22.2 bits (45), Expect = 5.2
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -2
Query: 678 FLPVVYLLIQHLLVVISWRKLW 613
F + Y + L+VVISW W
Sbjct: 233 FFMMDYYIPSILIVVISWVSFW 254
>AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein.
Length = 366
Score = 22.2 bits (45), Expect = 5.2
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = +3
Query: 489 FKEISKVIPSQNIR---RWMKLVEAQPQVQTAIKALPSDALDKLTKVSSRK 632
F+EI N+R R L EA ++ I LPSD KL+K+ + K
Sbjct: 248 FEEIQNQRVMANVRERQRTQSLNEAFAALRKIIPTLPSD---KLSKIQTLK 295
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.8 bits (44), Expect = 6.9
Identities = 9/42 (21%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 561 QVQTAIKALPSDALDKLTKVSSR-KSPPTNAESGGRQQEGKF 683
+V + LP ++ + ++ + PP +GG++Q+ +F
Sbjct: 11 KVDRSTSPLPRKPVNPVQELKALFAEPPVRVSNGGKEQDFRF 52
>M29490-1|AAA27725.1| 109|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone E30. ).
Length = 109
Score = 21.4 bits (43), Expect = 9.1
Identities = 10/37 (27%), Positives = 19/37 (51%)
Frame = +3
Query: 84 YFRSKYSMMRVSCNRSNPPLGGLMAVEFYRSSAKEID 194
+F++K + ++ + + NP LMA Y S +D
Sbjct: 67 WFQNKRAKIKKASGQKNPLALQLMAQGLYNHSTVPVD 103
>DQ435328-1|ABD92643.1| 143|Apis mellifera OBP11 protein.
Length = 143
Score = 21.4 bits (43), Expect = 9.1
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 421 IWLVKLYLYQTLRSSVFF 474
IWLV LY Y L+ ++ +
Sbjct: 6 IWLVSLYWYLILQIALVY 23
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 21.4 bits (43), Expect = 9.1
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +1
Query: 568 KQL*RLCRLMPLTNLPKFPPGNHHQ 642
+Q+ R + PLT P+F P N ++
Sbjct: 140 EQIPRFRHIGPLTPFPRFIPPNAYR 164
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 21.4 bits (43), Expect = 9.1
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = +3
Query: 270 LIRILENTFNKSVSPLEKVTMNHWLSFSL 356
L+R L +NK + P++ +T ++F L
Sbjct: 30 LVRDLFRGYNKLIRPVQNMTEKVHVNFGL 58
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.4 bits (43), Expect = 9.1
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +1
Query: 568 KQL*RLCRLMPLTNLPKFPPGNHHQ 642
+Q+ R + PLT P+F P N ++
Sbjct: 381 EQIPRFRHIGPLTPFPRFIPPNAYR 405
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,552
Number of Sequences: 438
Number of extensions: 4453
Number of successful extensions: 17
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22901220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -