Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt19a01
         (760 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    25   1.0  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    25   1.0  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    24   1.3  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     22   5.4  
AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex det...    22   7.2  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 10/47 (21%), Positives = 25/47 (53%)
 Frame = +1

Query: 403 LKQAVVKMVQECYTYVDKTPDKETKIKLIETLRTITEGKIYVEVERA 543
           L+++ +  +Q C   ++KT +++T +   + L+ I      VE+  +
Sbjct: 427 LRESFIGTLQRCLLSLEKTYERDTCLLASDALKQILSAAYNVELHNS 473


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 10/47 (21%), Positives = 25/47 (53%)
 Frame = +1

Query: 403 LKQAVVKMVQECYTYVDKTPDKETKIKLIETLRTITEGKIYVEVERA 543
           L+++ +  +Q C   ++KT +++T +   + L+ I      VE+  +
Sbjct: 465 LRESFIGTLQRCLLSLEKTYERDTCLLASDALKQILSAAYNVELHNS 511


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +3

Query: 450 RQNTR*RNKDKTN*NIENHNRRKDLCRS*KSETDS 554
           +QN   +N +K N N +N NR+ D  R+   + D+
Sbjct: 489 KQNGNRQNGNKQNDNKQNGNRQNDNKRNGNRQNDN 523



 Score = 23.0 bits (47), Expect = 3.1
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 450 RQNTR*RNKDKTN*NIENHNRRKD 521
           RQN   +N ++ N N +N NR+ D
Sbjct: 464 RQNDNKQNGNRQNDNKQNGNRQND 487



 Score = 21.8 bits (44), Expect = 7.2
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 450 RQNTR*RNKDKTN*NIENHNRRKD 521
           +QN   +N ++ N N +N NR+ D
Sbjct: 454 KQNGNRQNDNRQNDNKQNGNRQND 477


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +1

Query: 448 VDKTPDKETKIKLIETLRTI 507
           + +T D++TK KLIE  +T+
Sbjct: 185 IAETLDEDTKNKLIEESKTV 204


>AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -2

Query: 51  KIIACVINSTNLSNHY 4
           KII+ + NS N SN+Y
Sbjct: 302 KIISSLSNSCNYSNNY 317


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,748
Number of Sequences: 438
Number of extensions: 4456
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23875740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)