Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt18p01
(457 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY343324-1|AAQ21381.1| 156|Apis mellifera vacuolar H+ ATP synth... 43 2e-06
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 23 2.1
AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139 prot... 23 2.1
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 22 2.7
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 21 4.8
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 21 4.8
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 21 4.8
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 21 4.8
AY656663-1|AAT68000.1| 148|Apis mellifera pteropsin protein. 21 8.4
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 21 8.4
>AY343324-1|AAQ21381.1| 156|Apis mellifera vacuolar H+ ATP synthase
16 kDa proteolipidsubunit protein.
Length = 156
Score = 42.7 bits (96), Expect = 2e-06
Identities = 20/69 (28%), Positives = 36/69 (52%)
Frame = +1
Query: 238 WGTLGIAFSVALSVVGAAMXXXXXXXXXXXXXXKAPRIKTKNLISVIFCEAVAIYGLITA 417
+G +G A ++ S +GAA P + K++I V+ +AIYGL+ A
Sbjct: 13 FGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVA 72
Query: 418 IVLSGMLEK 444
++++G LE+
Sbjct: 73 VLIAGGLEE 81
Score = 30.7 bits (66), Expect = 0.008
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = +1
Query: 247 LGIAFSVALSVVGAAMXXXXXXXXXXXXXXKAPRIKTKNLISVIFCEAVAIYGLITAIVL 426
LG +V S + A + PR+ ++ +IF E + +YGLI AI L
Sbjct: 94 LGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 153
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 22.6 bits (46), Expect = 2.1
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -2
Query: 432 TREHDSSDQTVNGDGLAE 379
TREH S + T++ DG+ E
Sbjct: 349 TREHPSRNFTMSEDGMIE 366
>AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139
protein.
Length = 232
Score = 22.6 bits (46), Expect = 2.1
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 9/49 (18%)
Frame = +1
Query: 109 FLSYL-FVLLVGLAIPIFSLYYVLNG--------KGEQISLGWFLENTS 228
F S+L F+LLV +A+ +++ V N K ++I G+FL + S
Sbjct: 84 FASFLLFILLVQIAVAVYAFIVVKNDDNFRNISEKYQEIFNGYFLNSES 132
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 22.2 bits (45), Expect = 2.7
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -2
Query: 294 HGCSDNGQGNGKGDS 250
+G +DNG GNG ++
Sbjct: 252 NGANDNGNGNGASNN 266
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 21.4 bits (43), Expect = 4.8
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 276 GQGNGKGDSEGTPHIRG 226
G+G+GKG S G RG
Sbjct: 83 GRGHGKGGSRGRGGNRG 99
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 21.4 bits (43), Expect = 4.8
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 124 FVLLVGLAIPIFSLYYVL 177
F +L G+A+ +LYY L
Sbjct: 5 FEILCGIAVLFLALYYYL 22
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 21.4 bits (43), Expect = 4.8
Identities = 9/36 (25%), Positives = 20/36 (55%)
Frame = +1
Query: 97 KMRYFLSYLFVLLVGLAIPIFSLYYVLNGKGEQISL 204
K ++ L + VG++ ++Y+ + GE++SL
Sbjct: 235 KTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSL 270
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 21.4 bits (43), Expect = 4.8
Identities = 9/36 (25%), Positives = 19/36 (52%)
Frame = +1
Query: 97 KMRYFLSYLFVLLVGLAIPIFSLYYVLNGKGEQISL 204
K ++ L + VG+ ++Y+ + GE++SL
Sbjct: 248 KTLFYTVNLIIPCVGITFLTVLVFYLPSDSGEKVSL 283
>AY656663-1|AAT68000.1| 148|Apis mellifera pteropsin protein.
Length = 148
Score = 20.6 bits (41), Expect = 8.4
Identities = 6/15 (40%), Positives = 13/15 (86%)
Frame = -3
Query: 452 SEYFSSIPESTIAVI 408
++YF++ P +T+AV+
Sbjct: 134 AQYFNAKPSATVAVL 148
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 20.6 bits (41), Expect = 8.4
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -2
Query: 210 PSQTYLLTLSIEDVVQRKYRD 148
PS YLL S++ + ++ Y D
Sbjct: 211 PSVAYLLVGSLKGIARQFYND 231
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,735
Number of Sequences: 438
Number of extensions: 3329
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12066642
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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