Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt18o10
(680 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U91326-1|AAC27674.1| 913|Homo sapiens eIF-3 p110 subunit protein. 32 1.6
U46025-1|AAD03462.1| 913|Homo sapiens translation intiation fac... 32 1.6
BC071705-1|AAH71705.1| 913|Homo sapiens eukaryotic translation ... 32 1.6
BC001571-1|AAH01571.1| 913|Homo sapiens eukaryotic translation ... 32 1.6
AY762099-1|AAX07826.1| 913|Homo sapiens cell migration-inducing... 32 1.6
AK000739-1|BAA91352.1| 913|Homo sapiens protein ( Homo sapiens ... 32 1.6
AC002544-1|AAC27426.1| 913|Homo sapiens Translation initiation ... 32 1.6
BC066597-1|AAH66597.1| 537|Homo sapiens copine III protein. 30 8.8
BC036242-1|AAH36242.1| 537|Homo sapiens copine III protein. 30 8.8
BC007017-1|AAH07017.1| 262|Homo sapiens Unknown (protein for IM... 30 8.8
AF077226-1|AAD46074.2| 537|Homo sapiens copine III protein. 30 8.8
AB014536-1|BAA31611.2| 540|Homo sapiens KIAA0636 protein protein. 30 8.8
>U91326-1|AAC27674.1| 913|Homo sapiens eIF-3 p110 subunit protein.
Length = 913
Score = 32.3 bits (70), Expect = 1.6
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Frame = -1
Query: 242 DTAFRDVSAGVGEVIVNSCDTLNNPLLRVGVTQCLYSLLERNREIFDPLMKNHLP----- 78
D F + + VGE I+ + L+N + V C+ +L+ER E F +M+N P
Sbjct: 410 DILFANPNIFVGENILEESENLHNADQPLRVRGCILTLVERMDEEFTKIMQNTDPHSQEY 469
Query: 77 VHRVSNDHVVCA 42
V + ++ VCA
Sbjct: 470 VEHLKDEAQVCA 481
>U46025-1|AAD03462.1| 913|Homo sapiens translation intiation factor
eIF-3 p110 subunit protein.
Length = 913
Score = 32.3 bits (70), Expect = 1.6
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Frame = -1
Query: 242 DTAFRDVSAGVGEVIVNSCDTLNNPLLRVGVTQCLYSLLERNREIFDPLMKNHLP----- 78
D F + + VGE I+ + L+N + V C+ +L+ER E F +M+N P
Sbjct: 410 DILFANPNIFVGENILEESENLHNADQPLRVRGCILTLVERMDEEFTKIMQNTDPHSQEY 469
Query: 77 VHRVSNDHVVCA 42
V + ++ VCA
Sbjct: 470 VEHLKDEAQVCA 481
>BC071705-1|AAH71705.1| 913|Homo sapiens eukaryotic translation
initiation factor 3, subunit C protein.
Length = 913
Score = 32.3 bits (70), Expect = 1.6
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Frame = -1
Query: 242 DTAFRDVSAGVGEVIVNSCDTLNNPLLRVGVTQCLYSLLERNREIFDPLMKNHLP----- 78
D F + + VGE I+ + L+N + V C+ +L+ER E F +M+N P
Sbjct: 410 DILFANPNIFVGENILEESENLHNADQPLRVRGCILTLVERMDEEFTKIMQNTDPHSQEY 469
Query: 77 VHRVSNDHVVCA 42
V + ++ VCA
Sbjct: 470 VEHLKDEAQVCA 481
>BC001571-1|AAH01571.1| 913|Homo sapiens eukaryotic translation
initiation factor 3, subunit 8, 110kDa protein.
Length = 913
Score = 32.3 bits (70), Expect = 1.6
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Frame = -1
Query: 242 DTAFRDVSAGVGEVIVNSCDTLNNPLLRVGVTQCLYSLLERNREIFDPLMKNHLP----- 78
D F + + VGE I+ + L+N + V C+ +L+ER E F +M+N P
Sbjct: 410 DILFANPNIFVGENILEESENLHNADQPLRVRGCILTLVERMDEEFTKIMQNTDPHSQEY 469
Query: 77 VHRVSNDHVVCA 42
V + ++ VCA
Sbjct: 470 VEHLKDEAQVCA 481
>AY762099-1|AAX07826.1| 913|Homo sapiens cell migration-inducing
protein 17 protein.
Length = 913
Score = 32.3 bits (70), Expect = 1.6
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Frame = -1
Query: 242 DTAFRDVSAGVGEVIVNSCDTLNNPLLRVGVTQCLYSLLERNREIFDPLMKNHLP----- 78
D F + + VGE I+ + L+N + V C+ +L+ER E F +M+N P
Sbjct: 410 DILFANPNIFVGENILEESENLHNADQPLRVRGCILTLVERMDEEFTKIMQNTDPHSQEY 469
Query: 77 VHRVSNDHVVCA 42
V + ++ VCA
Sbjct: 470 VEHLKDEAQVCA 481
>AK000739-1|BAA91352.1| 913|Homo sapiens protein ( Homo sapiens
cDNA FLJ20732 fis, clone HEP08682. ).
Length = 913
Score = 32.3 bits (70), Expect = 1.6
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Frame = -1
Query: 242 DTAFRDVSAGVGEVIVNSCDTLNNPLLRVGVTQCLYSLLERNREIFDPLMKNHLP----- 78
D F + + VGE I+ + L+N + V C+ +L+ER E F +M+N P
Sbjct: 410 DILFANPNIFVGENILEESENLHNADQPLRVRGCILTLVERMDEEFTKIMQNTDPHSQEY 469
Query: 77 VHRVSNDHVVCA 42
V + ++ VCA
Sbjct: 470 VEHLKDEAQVCA 481
>AC002544-1|AAC27426.1| 913|Homo sapiens Translation initiation
factor eIF-p110 protein.
Length = 913
Score = 32.3 bits (70), Expect = 1.6
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Frame = -1
Query: 242 DTAFRDVSAGVGEVIVNSCDTLNNPLLRVGVTQCLYSLLERNREIFDPLMKNHLP----- 78
D F + + VGE I+ + L+N + V C+ +L+ER E F +M+N P
Sbjct: 410 DILFANPNIFVGENILEESENLHNADQPLRVRGCILTLVERMDEEFTKIMQNTDPHSQEY 469
Query: 77 VHRVSNDHVVCA 42
V + ++ VCA
Sbjct: 470 VEHLKDEAQVCA 481
>BC066597-1|AAH66597.1| 537|Homo sapiens copine III protein.
Length = 537
Score = 29.9 bits (64), Expect = 8.8
Identities = 23/77 (29%), Positives = 32/77 (41%)
Frame = +3
Query: 72 VHRKMVFHQRVKDFAIPFKKRIKTLSYTDPEKRIIKGVAAIDNDFSHASANITEGGVGYS 251
VHR V + PFK + +L Y D +K I DND SH G +
Sbjct: 177 VHRTEVVKNNLNPVWRPFKISLNSLCYGDMDKTIKVECYDYDNDGSHDLI-----GTFQT 231
Query: 252 FVTVRMKSQRHHPLNFE 302
+T ++ R P+ FE
Sbjct: 232 TMTKLKEASRSSPVEFE 248
>BC036242-1|AAH36242.1| 537|Homo sapiens copine III protein.
Length = 537
Score = 29.9 bits (64), Expect = 8.8
Identities = 23/77 (29%), Positives = 32/77 (41%)
Frame = +3
Query: 72 VHRKMVFHQRVKDFAIPFKKRIKTLSYTDPEKRIIKGVAAIDNDFSHASANITEGGVGYS 251
VHR V + PFK + +L Y D +K I DND SH G +
Sbjct: 177 VHRTEVVKNNLNPVWRPFKISLNSLCYGDMDKTIKVECYDYDNDGSHDLI-----GTFQT 231
Query: 252 FVTVRMKSQRHHPLNFE 302
+T ++ R P+ FE
Sbjct: 232 TMTKLKEASRSSPVEFE 248
>BC007017-1|AAH07017.1| 262|Homo sapiens Unknown (protein for
IMAGE:3950554) protein.
Length = 262
Score = 29.9 bits (64), Expect = 8.8
Identities = 23/77 (29%), Positives = 32/77 (41%)
Frame = +3
Query: 72 VHRKMVFHQRVKDFAIPFKKRIKTLSYTDPEKRIIKGVAAIDNDFSHASANITEGGVGYS 251
VHR V + PFK + +L Y D +K I DND SH G +
Sbjct: 177 VHRTEVVKNNLNPVWRPFKISLNSLCYGDMDKTIKVECYDYDNDGSHDLI-----GTFQT 231
Query: 252 FVTVRMKSQRHHPLNFE 302
+T ++ R P+ FE
Sbjct: 232 TMTKLKEASRSSPVEFE 248
>AF077226-1|AAD46074.2| 537|Homo sapiens copine III protein.
Length = 537
Score = 29.9 bits (64), Expect = 8.8
Identities = 23/77 (29%), Positives = 32/77 (41%)
Frame = +3
Query: 72 VHRKMVFHQRVKDFAIPFKKRIKTLSYTDPEKRIIKGVAAIDNDFSHASANITEGGVGYS 251
VHR V + PFK + +L Y D +K I DND SH G +
Sbjct: 177 VHRTEVVKNNLNPVWRPFKISLNSLCYGDMDKTIKVECYDYDNDGSHDLI-----GTFQT 231
Query: 252 FVTVRMKSQRHHPLNFE 302
+T ++ R P+ FE
Sbjct: 232 TMTKLKEASRSSPVEFE 248
>AB014536-1|BAA31611.2| 540|Homo sapiens KIAA0636 protein protein.
Length = 540
Score = 29.9 bits (64), Expect = 8.8
Identities = 23/77 (29%), Positives = 32/77 (41%)
Frame = +3
Query: 72 VHRKMVFHQRVKDFAIPFKKRIKTLSYTDPEKRIIKGVAAIDNDFSHASANITEGGVGYS 251
VHR V + PFK + +L Y D +K I DND SH G +
Sbjct: 180 VHRTEVVKNNLNPVWRPFKISLNSLCYGDMDKTIKVECYDYDNDGSHDLI-----GTFQT 234
Query: 252 FVTVRMKSQRHHPLNFE 302
+T ++ R P+ FE
Sbjct: 235 TMTKLKEASRSSPVEFE 251
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,733,263
Number of Sequences: 237096
Number of extensions: 1585122
Number of successful extensions: 3174
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3174
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7727256732
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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