Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt18n01
         (195 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   1.0  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    20   2.3  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        20   2.3  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        20   2.3  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        20   2.3  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    19   7.1  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 1.0
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +2

Query: 110 WKSNYFVKIIQLLDEYP 160
           W+   F  ++++LDE+P
Sbjct: 862 WRHWKFPNLVEVLDEFP 878


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 20.2 bits (40), Expect = 2.3
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -3

Query: 187 VIGTHDETFXVLVQELDDL 131
           V+G H +    ++QELD++
Sbjct: 363 VMGCHPDIQEKVIQELDEI 381


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.2 bits (40), Expect = 2.3
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +2

Query: 77  LSRMGREDKATW 112
           L ++G E+KA W
Sbjct: 330 LGKLGEEEKADW 341


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.2 bits (40), Expect = 2.3
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +2

Query: 77  LSRMGREDKATW 112
           L ++G E+KA W
Sbjct: 330 LGKLGEEEKADW 341


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.2 bits (40), Expect = 2.3
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +2

Query: 77  LSRMGREDKATW 112
           L ++G E+KA W
Sbjct: 330 LGKLGEEEKADW 341


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 18.6 bits (36), Expect = 7.1
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 169 ETFXVLVQELDDLNEVVRLPSSLV 98
           ETF  L+  LD++    +  SS V
Sbjct: 320 ETFNQLISSLDEIRTRYKDSSSSV 343


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,380
Number of Sequences: 438
Number of extensions: 945
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 44
effective length of database: 127,071
effective search space used:  2541420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)