Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt18m14
         (596 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L77213-1|AAC37593.1|  192|Homo sapiens phosphomevalonate kinase ...   130   4e-30
CR541998-1|CAG46795.1|  192|Homo sapiens PMVK protein.                130   4e-30
BC007694-1|AAH07694.1|  192|Homo sapiens phosphomevalonate kinas...   130   4e-30
BC006089-1|AAH06089.1|  192|Homo sapiens phosphomevalonate kinas...   130   4e-30
AL451085-1|CAI13237.1|  192|Homo sapiens phosphomevalonate kinas...   130   4e-30
BT019976-1|AAV38779.1|  192|Homo sapiens phosphomevalonate kinas...   129   6e-30
AF026069-1|AAC60791.1|  160|Homo sapiens phosphomevalonate kinas...    98   2e-20

>L77213-1|AAC37593.1|  192|Homo sapiens phosphomevalonate kinase
           protein.
          Length = 192

 Score =  130 bits (314), Expect = 4e-30
 Identities = 58/136 (42%), Positives = 91/136 (66%), Gaps = 1/136 (0%)
 Frame = +2

Query: 98  SPKIILLFSGKRKSGKDFLTDHLRHIL-ADKCEIIKISQPIKTHWAXXXXXXXXXXXSEG 274
           +P+++LLFSGKRKSGKDF+T+ L+  L AD C ++++S P+K  +A              
Sbjct: 7   APRLVLLFSGKRKSGKDFVTEALQSRLGADVCAVLRLSGPLKEQYAQEHGLNFQRLLDTS 66

Query: 275 EYKEQYRLEMIKWSEEMRNKDYGCFCKAACENAAIKPVWIVSDIRRKTDIRWFKETYGDI 454
            YKE +R +MI+W EE R  D G FC+   E  + +P+W+VSD RR +DI+WF+E YG +
Sbjct: 67  TYKEAFRKDMIRWGEEKRQADPGFFCRKIVEGIS-QPIWLVSDTRRVSDIQWFREAYGAV 125

Query: 455 IRTVRITADDRTRKEK 502
            +TVR+ A +++R+++
Sbjct: 126 TQTVRVVALEQSRQQR 141


>CR541998-1|CAG46795.1|  192|Homo sapiens PMVK protein.
          Length = 192

 Score =  130 bits (314), Expect = 4e-30
 Identities = 58/136 (42%), Positives = 91/136 (66%), Gaps = 1/136 (0%)
 Frame = +2

Query: 98  SPKIILLFSGKRKSGKDFLTDHLRHIL-ADKCEIIKISQPIKTHWAXXXXXXXXXXXSEG 274
           +P+++LLFSGKRKSGKDF+T+ L+  L AD C ++++S P+K  +A              
Sbjct: 7   APRLVLLFSGKRKSGKDFVTEALQSRLGADVCAVLRLSGPLKEQYAQEHGLNFQRLLDTS 66

Query: 275 EYKEQYRLEMIKWSEEMRNKDYGCFCKAACENAAIKPVWIVSDIRRKTDIRWFKETYGDI 454
            YKE +R +MI+W EE R  D G FC+   E  + +P+W+VSD RR +DI+WF+E YG +
Sbjct: 67  TYKEAFRKDMIRWGEEKRQADPGFFCRKIVEGIS-QPIWLVSDTRRVSDIQWFREAYGAV 125

Query: 455 IRTVRITADDRTRKEK 502
            +TVR+ A +++R+++
Sbjct: 126 TQTVRVVALEQSRQQR 141


>BC007694-1|AAH07694.1|  192|Homo sapiens phosphomevalonate kinase
           protein.
          Length = 192

 Score =  130 bits (314), Expect = 4e-30
 Identities = 58/136 (42%), Positives = 91/136 (66%), Gaps = 1/136 (0%)
 Frame = +2

Query: 98  SPKIILLFSGKRKSGKDFLTDHLRHIL-ADKCEIIKISQPIKTHWAXXXXXXXXXXXSEG 274
           +P+++LLFSGKRKSGKDF+T+ L+  L AD C ++++S P+K  +A              
Sbjct: 7   APRLVLLFSGKRKSGKDFVTEALQSRLGADVCAVLRLSGPLKEQYAQEHGLNFQRLLDTS 66

Query: 275 EYKEQYRLEMIKWSEEMRNKDYGCFCKAACENAAIKPVWIVSDIRRKTDIRWFKETYGDI 454
            YKE +R +MI+W EE R  D G FC+   E  + +P+W+VSD RR +DI+WF+E YG +
Sbjct: 67  TYKEAFRKDMIRWGEEKRQADPGFFCRKIVEGIS-QPIWLVSDTRRVSDIQWFREAYGAV 125

Query: 455 IRTVRITADDRTRKEK 502
            +TVR+ A +++R+++
Sbjct: 126 TQTVRVVALEQSRQQR 141


>BC006089-1|AAH06089.1|  192|Homo sapiens phosphomevalonate kinase
           protein.
          Length = 192

 Score =  130 bits (314), Expect = 4e-30
 Identities = 58/136 (42%), Positives = 91/136 (66%), Gaps = 1/136 (0%)
 Frame = +2

Query: 98  SPKIILLFSGKRKSGKDFLTDHLRHIL-ADKCEIIKISQPIKTHWAXXXXXXXXXXXSEG 274
           +P+++LLFSGKRKSGKDF+T+ L+  L AD C ++++S P+K  +A              
Sbjct: 7   APRLVLLFSGKRKSGKDFVTEALQSRLGADVCAVLRLSGPLKEQYAQEHGLNFQRLLDTS 66

Query: 275 EYKEQYRLEMIKWSEEMRNKDYGCFCKAACENAAIKPVWIVSDIRRKTDIRWFKETYGDI 454
            YKE +R +MI+W EE R  D G FC+   E  + +P+W+VSD RR +DI+WF+E YG +
Sbjct: 67  TYKEAFRKDMIRWGEEKRQADPGFFCRKIVEGIS-QPIWLVSDTRRVSDIQWFREAYGAV 125

Query: 455 IRTVRITADDRTRKEK 502
            +TVR+ A +++R+++
Sbjct: 126 TQTVRVVALEQSRQQR 141


>AL451085-1|CAI13237.1|  192|Homo sapiens phosphomevalonate kinase
           protein.
          Length = 192

 Score =  130 bits (314), Expect = 4e-30
 Identities = 58/136 (42%), Positives = 91/136 (66%), Gaps = 1/136 (0%)
 Frame = +2

Query: 98  SPKIILLFSGKRKSGKDFLTDHLRHIL-ADKCEIIKISQPIKTHWAXXXXXXXXXXXSEG 274
           +P+++LLFSGKRKSGKDF+T+ L+  L AD C ++++S P+K  +A              
Sbjct: 7   APRLVLLFSGKRKSGKDFVTEALQSRLGADVCAVLRLSGPLKEQYAQEHGLNFQRLLDTS 66

Query: 275 EYKEQYRLEMIKWSEEMRNKDYGCFCKAACENAAIKPVWIVSDIRRKTDIRWFKETYGDI 454
            YKE +R +MI+W EE R  D G FC+   E  + +P+W+VSD RR +DI+WF+E YG +
Sbjct: 67  TYKEAFRKDMIRWGEEKRQADPGFFCRKIVEGIS-QPIWLVSDTRRVSDIQWFREAYGAV 125

Query: 455 IRTVRITADDRTRKEK 502
            +TVR+ A +++R+++
Sbjct: 126 TQTVRVVALEQSRQQR 141


>BT019976-1|AAV38779.1|  192|Homo sapiens phosphomevalonate kinase
           protein.
          Length = 192

 Score =  129 bits (312), Expect = 6e-30
 Identities = 58/136 (42%), Positives = 91/136 (66%), Gaps = 1/136 (0%)
 Frame = +2

Query: 98  SPKIILLFSGKRKSGKDFLTDHLRHIL-ADKCEIIKISQPIKTHWAXXXXXXXXXXXSEG 274
           +P+++LLFSGKRKSGKDF+T+ L+  L AD C ++++S P+K  +A              
Sbjct: 7   APRLVLLFSGKRKSGKDFVTEALQSRLGADVCAVLRLSGPLKEQYAQEHGLNFQRLLDTS 66

Query: 275 EYKEQYRLEMIKWSEEMRNKDYGCFCKAACENAAIKPVWIVSDIRRKTDIRWFKETYGDI 454
            YKE +R +MI+W EE R  D G FC+   E  + +P+W+VSD RR +DI+WF+E YG +
Sbjct: 67  TYKEAFRKDMIRWGEEKRQADPGFFCRKIVEGIS-QPIWLVSDTRRVSDIQWFREAYGAM 125

Query: 455 IRTVRITADDRTRKEK 502
            +TVR+ A +++R+++
Sbjct: 126 TQTVRVVALEQSRQQR 141


>AF026069-1|AAC60791.1|  160|Homo sapiens phosphomevalonate kinase
           protein.
          Length = 160

 Score = 97.9 bits (233), Expect = 2e-20
 Identities = 41/108 (37%), Positives = 67/108 (62%)
 Frame = +2

Query: 179 ADKCEIIKISQPIKTHWAXXXXXXXXXXXSEGEYKEQYRLEMIKWSEEMRNKDYGCFCKA 358
           AD C ++++S P+K  +A               YKE +R +MI+W EE R  D G FC+ 
Sbjct: 3   ADVCAVLRLSGPLKEQYAQEHGLNFQRLLDTSTYKEAFRKDMIRWGEEKRQADPGFFCRK 62

Query: 359 ACENAAIKPVWIVSDIRRKTDIRWFKETYGDIIRTVRITADDRTRKEK 502
             E  + +P+W+VSD RR +DI+WF+E YG + +TVR+ A +++R+++
Sbjct: 63  IVEGIS-QPIWLVSDTRRVSDIQWFREAYGAVTQTVRVVALEQSRQQR 109


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,614,156
Number of Sequences: 237096
Number of extensions: 1448270
Number of successful extensions: 2576
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2563
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)